Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate
Autor(a) principal: | |
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Data de Publicação: | 2009 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1375/twin.12.5.462 http://hdl.handle.net/11449/225749 |
Resumo: | Phenotypically discordant monozygotic twins offer the possibility of gene discovery through delineation of molecular abnormalities in one member of the twin pair. One proposed mechanism of discordance is postzygotically occurring genomic alterations resulting from mitotic recombination and other somatic changes. Detection of altered genomic fragments can reveal candidate gene loci that can be verified through additional analyses. We investigated this hypothesis using array comparative genomic hybridization; the 50K and 250K Affymetrix GeneChip® SNP arrays and an Illumina custom array consisting of 1,536 SNPs, to scan for genomic alterations in a sample of monozygotic twin pairs with discordant cleft lip and/or palate phenotypes. Paired analysis for deletions, amplifications and loss of heterozygosity, along with sequence verification of SNPs with discordant genotype calls did not reveal any genomic discordance between twin pairs in lymphocyte DNA samples. Our results demonstrate that postzygotic genomic alterations are not a common cause of monozygotic twin discordance for isolated cleft lip and/or palate. However, rare or balanced genomic alterations, tissue-specific events and small aberrations beyond the detection level of our experimental approach cannot be ruled out. The stability of genomes we observed in our study samples also suggests that detection of discordant events in other monozygotic twin pairs would be remarkable and of potential disease significance. |
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Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palateCleft lip and palateDiscordantGenome-wideMonozygotic twinsPhenotypically discordant monozygotic twins offer the possibility of gene discovery through delineation of molecular abnormalities in one member of the twin pair. One proposed mechanism of discordance is postzygotically occurring genomic alterations resulting from mitotic recombination and other somatic changes. Detection of altered genomic fragments can reveal candidate gene loci that can be verified through additional analyses. We investigated this hypothesis using array comparative genomic hybridization; the 50K and 250K Affymetrix GeneChip® SNP arrays and an Illumina custom array consisting of 1,536 SNPs, to scan for genomic alterations in a sample of monozygotic twin pairs with discordant cleft lip and/or palate phenotypes. Paired analysis for deletions, amplifications and loss of heterozygosity, along with sequence verification of SNPs with discordant genotype calls did not reveal any genomic discordance between twin pairs in lymphocyte DNA samples. Our results demonstrate that postzygotic genomic alterations are not a common cause of monozygotic twin discordance for isolated cleft lip and/or palate. However, rare or balanced genomic alterations, tissue-specific events and small aberrations beyond the detection level of our experimental approach cannot be ruled out. The stability of genomes we observed in our study samples also suggests that detection of discordant events in other monozygotic twin pairs would be remarkable and of potential disease significance.University of Iowa Department of Pediatrics, S. Grand Avenue, 2182 ML, Iowa City, IA 52242Department of Pathology and Lab. Medicine University of North CarolinaDepartment of Human Genetics Nagasaki University Graduate School of Biomedical Sciences, NagasakiBiostatistics Branch National Institute of Environmental Health Sciences (NIEHS)Craniofacial Development Murdoch Children's Research Institute Royal Children's Hospital, Melbourne, VICServico de Aconselhamento Genetico da Universidade Estadual Paulista, BotucatuDepartment of Epidemiology Institute of Public Health University of Southern DenmarkServico de Aconselhamento Genetico da Universidade Estadual Paulista, BotucatuUniversity of IowaUniversity of North CarolinaNagasaki University Graduate School of Biomedical SciencesNational Institute of Environmental Health Sciences (NIEHS)Royal Children's HospitalUniversidade Estadual Paulista (UNESP)University of Southern DenmarkKimani, Jane W.Yoshiura, Koh-IchiroShi, MinJugessur, AstanandMoretti-Ferreira, Danilo [UNESP]Christensen, KaareMurray, Jeffrey C.2022-04-28T20:59:30Z2022-04-28T20:59:30Z2009-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article462-468http://dx.doi.org/10.1375/twin.12.5.462Twin Research and Human Genetics, v. 12, n. 5, p. 462-468, 2009.1832-4274http://hdl.handle.net/11449/22574910.1375/twin.12.5.4622-s2.0-74949144188Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengTwin Research and Human Geneticsinfo:eu-repo/semantics/openAccess2022-04-28T20:59:30Zoai:repositorio.unesp.br:11449/225749Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:11:55.697045Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate |
title |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate |
spellingShingle |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate Kimani, Jane W. Cleft lip and palate Discordant Genome-wide Monozygotic twins |
title_short |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate |
title_full |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate |
title_fullStr |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate |
title_full_unstemmed |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate |
title_sort |
Search for genomic alterations in monozygotic twins discordant for cleft lip and/or palate |
author |
Kimani, Jane W. |
author_facet |
Kimani, Jane W. Yoshiura, Koh-Ichiro Shi, Min Jugessur, Astanand Moretti-Ferreira, Danilo [UNESP] Christensen, Kaare Murray, Jeffrey C. |
author_role |
author |
author2 |
Yoshiura, Koh-Ichiro Shi, Min Jugessur, Astanand Moretti-Ferreira, Danilo [UNESP] Christensen, Kaare Murray, Jeffrey C. |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
University of Iowa University of North Carolina Nagasaki University Graduate School of Biomedical Sciences National Institute of Environmental Health Sciences (NIEHS) Royal Children's Hospital Universidade Estadual Paulista (UNESP) University of Southern Denmark |
dc.contributor.author.fl_str_mv |
Kimani, Jane W. Yoshiura, Koh-Ichiro Shi, Min Jugessur, Astanand Moretti-Ferreira, Danilo [UNESP] Christensen, Kaare Murray, Jeffrey C. |
dc.subject.por.fl_str_mv |
Cleft lip and palate Discordant Genome-wide Monozygotic twins |
topic |
Cleft lip and palate Discordant Genome-wide Monozygotic twins |
description |
Phenotypically discordant monozygotic twins offer the possibility of gene discovery through delineation of molecular abnormalities in one member of the twin pair. One proposed mechanism of discordance is postzygotically occurring genomic alterations resulting from mitotic recombination and other somatic changes. Detection of altered genomic fragments can reveal candidate gene loci that can be verified through additional analyses. We investigated this hypothesis using array comparative genomic hybridization; the 50K and 250K Affymetrix GeneChip® SNP arrays and an Illumina custom array consisting of 1,536 SNPs, to scan for genomic alterations in a sample of monozygotic twin pairs with discordant cleft lip and/or palate phenotypes. Paired analysis for deletions, amplifications and loss of heterozygosity, along with sequence verification of SNPs with discordant genotype calls did not reveal any genomic discordance between twin pairs in lymphocyte DNA samples. Our results demonstrate that postzygotic genomic alterations are not a common cause of monozygotic twin discordance for isolated cleft lip and/or palate. However, rare or balanced genomic alterations, tissue-specific events and small aberrations beyond the detection level of our experimental approach cannot be ruled out. The stability of genomes we observed in our study samples also suggests that detection of discordant events in other monozygotic twin pairs would be remarkable and of potential disease significance. |
publishDate |
2009 |
dc.date.none.fl_str_mv |
2009-12-01 2022-04-28T20:59:30Z 2022-04-28T20:59:30Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1375/twin.12.5.462 Twin Research and Human Genetics, v. 12, n. 5, p. 462-468, 2009. 1832-4274 http://hdl.handle.net/11449/225749 10.1375/twin.12.5.462 2-s2.0-74949144188 |
url |
http://dx.doi.org/10.1375/twin.12.5.462 http://hdl.handle.net/11449/225749 |
identifier_str_mv |
Twin Research and Human Genetics, v. 12, n. 5, p. 462-468, 2009. 1832-4274 10.1375/twin.12.5.462 2-s2.0-74949144188 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Twin Research and Human Genetics |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
462-468 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129404140781568 |