Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1007/s13277-016-5133-8 http://hdl.handle.net/11449/176939 |
Resumo: | Breast carcinoma (BC) corresponds to 23 % of all cancers in women, with 1.38 million new cases and 460,000 deaths worldwide annually. Despite the significant advances in the identification of molecular markers and different modalities of treatment for primary BC, the ability to predict its metastatic behavior is still limited. The purpose of this study was to identify novel molecular markers associated with distinct clinical outcomes in a Brazilian cohort of BC patients. We generated global gene expression profiles using tumor samples from 24 patients with invasive ductal BC who were followed for at least 5 years, including a group of 15 patients with favorable outcomes and another with nine patients who developed metastasis. We identified a set of 58 differentially expressed genes (p ≤ 0.01) between the two groups. The prognostic value of this metastasis signature was corroborated by its ability to stratify independent BC patient datasets according to disease-free survival and overall survival. The upregulation of B3GNT7, PPM1D, TNKS2, PHB, and GTSE1 in patients with poor outcomes was confirmed by quantitative reverse transcription polymerase chain reaction (RT-qPCR) in an independent sample of patients with BC (47 with good outcomes and eight that presented metastasis). The expression of BCL2-associated agonist of cell death (BAD) protein was determined in 1276 BC tissue samples by immunohistochemistry and was consistent with the reduced BAD mRNA expression levels in metastatic cases, as observed in the oligoarray data. These findings point to novel prognostic markers that can distinguish breast carcinomas with metastatic potential from those with favorable outcomes. |
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Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinomaBreast cancerGene expressionMetastasisPrognostic gene signatureTumor biomarkersBreast carcinoma (BC) corresponds to 23 % of all cancers in women, with 1.38 million new cases and 460,000 deaths worldwide annually. Despite the significant advances in the identification of molecular markers and different modalities of treatment for primary BC, the ability to predict its metastatic behavior is still limited. The purpose of this study was to identify novel molecular markers associated with distinct clinical outcomes in a Brazilian cohort of BC patients. We generated global gene expression profiles using tumor samples from 24 patients with invasive ductal BC who were followed for at least 5 years, including a group of 15 patients with favorable outcomes and another with nine patients who developed metastasis. We identified a set of 58 differentially expressed genes (p ≤ 0.01) between the two groups. The prognostic value of this metastasis signature was corroborated by its ability to stratify independent BC patient datasets according to disease-free survival and overall survival. The upregulation of B3GNT7, PPM1D, TNKS2, PHB, and GTSE1 in patients with poor outcomes was confirmed by quantitative reverse transcription polymerase chain reaction (RT-qPCR) in an independent sample of patients with BC (47 with good outcomes and eight that presented metastasis). The expression of BCL2-associated agonist of cell death (BAD) protein was determined in 1276 BC tissue samples by immunohistochemistry and was consistent with the reduced BAD mRNA expression levels in metastatic cases, as observed in the oligoarray data. These findings point to novel prognostic markers that can distinguish breast carcinomas with metastatic potential from those with favorable outcomes.Instituto de Pesquisa e Desenvolvimento Universidade do Vale do ParaíbaCIPE - AC Camargo Cancer CenterDepartamento de Patologia Faculdade de Medicina Universidade do Estado de São Paulo - UNESPDepartamento de Patologia AC Camargo Cancer CenterDepartamento de Senologia Hospital Amaral CarvalhoDepartamento de Bioquímica Instituto de Química Universidade de São Paulo - USP, Av. Prof. Lineu Prestes, 748, Cidade UniversitariaInstituto ButantanDepartment of Clinical Genetics Vejle SygehusInstitute of Regional Health University of Southern DenmarkDepartamento de Patologia Faculdade de Medicina Universidade do Estado de São Paulo - UNESPUniversidade do Vale do ParaíbaCIPE - AC Camargo Cancer CenterUniversidade Estadual Paulista (Unesp)AC Camargo Cancer CenterHospital Amaral CarvalhoUniversidade de São Paulo (USP)Instituto ButantanUniversity of Southern DenmarkCanevari, Renata A.Marchi, Fabio A.Domingues, Maria A. C. [UNESP]de Andrade, Victor PianaCaldeira, José R. F.Verjovski-Almeida, SergioRogatto, Silvia R.Reis, Eduardo M.2018-12-11T17:23:11Z2018-12-11T17:23:11Z2016-10-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article13855-13870application/pdfhttp://dx.doi.org/10.1007/s13277-016-5133-8Tumor Biology, v. 37, n. 10, p. 13855-13870, 2016.1423-03801010-4283http://hdl.handle.net/11449/17693910.1007/s13277-016-5133-82-s2.0-849828100652-s2.0-84982810065.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengTumor Biology1,1491,149info:eu-repo/semantics/openAccess2024-01-05T06:22:14Zoai:repositorio.unesp.br:11449/176939Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:09:34.577194Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma |
title |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma |
spellingShingle |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma Canevari, Renata A. Breast cancer Gene expression Metastasis Prognostic gene signature Tumor biomarkers |
title_short |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma |
title_full |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma |
title_fullStr |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma |
title_full_unstemmed |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma |
title_sort |
Identification of novel biomarkers associated with poor patient outcomes in invasive breast carcinoma |
author |
Canevari, Renata A. |
author_facet |
Canevari, Renata A. Marchi, Fabio A. Domingues, Maria A. C. [UNESP] de Andrade, Victor Piana Caldeira, José R. F. Verjovski-Almeida, Sergio Rogatto, Silvia R. Reis, Eduardo M. |
author_role |
author |
author2 |
Marchi, Fabio A. Domingues, Maria A. C. [UNESP] de Andrade, Victor Piana Caldeira, José R. F. Verjovski-Almeida, Sergio Rogatto, Silvia R. Reis, Eduardo M. |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade do Vale do Paraíba CIPE - AC Camargo Cancer Center Universidade Estadual Paulista (Unesp) AC Camargo Cancer Center Hospital Amaral Carvalho Universidade de São Paulo (USP) Instituto Butantan University of Southern Denmark |
dc.contributor.author.fl_str_mv |
Canevari, Renata A. Marchi, Fabio A. Domingues, Maria A. C. [UNESP] de Andrade, Victor Piana Caldeira, José R. F. Verjovski-Almeida, Sergio Rogatto, Silvia R. Reis, Eduardo M. |
dc.subject.por.fl_str_mv |
Breast cancer Gene expression Metastasis Prognostic gene signature Tumor biomarkers |
topic |
Breast cancer Gene expression Metastasis Prognostic gene signature Tumor biomarkers |
description |
Breast carcinoma (BC) corresponds to 23 % of all cancers in women, with 1.38 million new cases and 460,000 deaths worldwide annually. Despite the significant advances in the identification of molecular markers and different modalities of treatment for primary BC, the ability to predict its metastatic behavior is still limited. The purpose of this study was to identify novel molecular markers associated with distinct clinical outcomes in a Brazilian cohort of BC patients. We generated global gene expression profiles using tumor samples from 24 patients with invasive ductal BC who were followed for at least 5 years, including a group of 15 patients with favorable outcomes and another with nine patients who developed metastasis. We identified a set of 58 differentially expressed genes (p ≤ 0.01) between the two groups. The prognostic value of this metastasis signature was corroborated by its ability to stratify independent BC patient datasets according to disease-free survival and overall survival. The upregulation of B3GNT7, PPM1D, TNKS2, PHB, and GTSE1 in patients with poor outcomes was confirmed by quantitative reverse transcription polymerase chain reaction (RT-qPCR) in an independent sample of patients with BC (47 with good outcomes and eight that presented metastasis). The expression of BCL2-associated agonist of cell death (BAD) protein was determined in 1276 BC tissue samples by immunohistochemistry and was consistent with the reduced BAD mRNA expression levels in metastatic cases, as observed in the oligoarray data. These findings point to novel prognostic markers that can distinguish breast carcinomas with metastatic potential from those with favorable outcomes. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-10-01 2018-12-11T17:23:11Z 2018-12-11T17:23:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s13277-016-5133-8 Tumor Biology, v. 37, n. 10, p. 13855-13870, 2016. 1423-0380 1010-4283 http://hdl.handle.net/11449/176939 10.1007/s13277-016-5133-8 2-s2.0-84982810065 2-s2.0-84982810065.pdf |
url |
http://dx.doi.org/10.1007/s13277-016-5133-8 http://hdl.handle.net/11449/176939 |
identifier_str_mv |
Tumor Biology, v. 37, n. 10, p. 13855-13870, 2016. 1423-0380 1010-4283 10.1007/s13277-016-5133-8 2-s2.0-84982810065 2-s2.0-84982810065.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Tumor Biology 1,149 1,149 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
13855-13870 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129398869590016 |