Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.bspc.2021.102995 http://hdl.handle.net/11449/233314 |
Resumo: | Background: Keratoconus (KC) is a multifactorial progressive corneal disease, pathogenically characterized by genetic, biochemical, and environmental key factors. Nevertheless, current tools used for its diagnosis, such as Pentacam, examine the posterior and anterior surfaces of the cornea based on a rotating Scheimpflug camera and provide, as output, a set of features for which the clinical interpretation has been error-prone. Objective: Consequently, the objective of this study is to describe a novel Artificial Intelligence (AI) strategy that receives subsets of the 52 original Pentacam tomographic descriptors as input and produces, as output, the scalar value called Corneal Tomography Multivariate Index (CTMVI). Specifically based on Paraconsistent Feature Engineering (PFE) and Support Vector Machine (SVM), it intends to help clinicians in the pre-diagnosis of cornea ectasia risk assessment. Methods: We collected data from patients’ eyes in three different classes: 411 with healthy corneas to compose the control group (CG), 302 with KC to represent the KC group (KCG) and, additionally, 64 in a group with very asymmetric ectasia but with normal corneal topography (VAE-NTG) in one eye, totaling 777 samples. A set of features from the patients’ corneal tomographic assessments was extracted to serve as input to the paraconsistent feature selector algorithm. Once it provides the best subsets of features representing the classes, a one-against-all SVM-based algorithm was successfully used to classify those groups. Notably, normal topography criteria (NTPC) were considered based on the steepest front curvature (Kmax) <47.2 diopters, a paracentral inferior–superior (I–S value) <1.45, and a keratoconus percentage index (KISA%) score <60. Normal corneal tomography (NTMC) consists of an anterior chamber depth <3.8μm, a front corneal apical elevation <4μm, a front corneal elevation (FCE) at the thinnest point <3.8μm, and an FCE <12μm in the corneal 4.0 mm center. Respective back corneal elevation values were 7μm, 13μm, and 25μm. To assess the clinical validity of the models and their abilities to correctly classify new data, two procedures were used: the first was a holdout cross validation, and the second was the external validation consisting of an independent test with samples that were not part of the training data. Results: Notably, PFE-based analysis effectively found dominant representative features which allowed for relevant classification accuracies based on SVM. Among numerous results, a parallel test combining CTMVI and existing Pentacam Random Forest Index (PRFI) produced a value of sensitivity of 0.99 and a value of specificity of 0.84, using 50% of the dataset for system modeling and the remaining 50% for assessment, improving current reports found in the literature. CTMVI, BAD-D, and PRFI showed an accuracy (acc) of 0.89, 0.86, and 0.89, respectively, in the external validation population to distinguish the healthy eyes from subclinical cases. The three indexes resulted in 0.99 acc when used to distinguish healthy eyes from corneal ectasia ones. CTMVI showed 100% sensitivity and 100% specificity between CG and KCG (cutoff ⩽−1.36). Regarding VAE-NTG patients, CTMVI had an area under the curve (AUC) of 0.935 (87.5% sensitivity; 84.95% specificity; cutoff ⩽0.639), which was higher than those of Belin/Ambrósio Enhanced Ectasia Total Deviation Value (BAD D) with AUC 0.765; 78.12% sensitivity; 65.05% specificity; p = .0001, and PRFI with AUC 0.805; 59.38% sensitivity; 90.78% specificity; p = .0004. During the external validation, it was shown to be as effective as BAD and PRFI. Conclusions: Based on the innovative joint application of PFE and SVM to distinguish healthy corneas from those pathologically-affected, we provided an original contribution to the state-of-the-art in terms of AI-aided diagnosis. Therefore, CTMVI improves the detection of corneal ectasia susceptibility using tomographic-derived descriptors. This reassures the efficacy of the proposed approach. |
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Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasiaArtificial intelligenceCorneal ectasiaCorneal topographyKeratoconusParaconsistent feature engineeringSupport vector machineBackground: Keratoconus (KC) is a multifactorial progressive corneal disease, pathogenically characterized by genetic, biochemical, and environmental key factors. Nevertheless, current tools used for its diagnosis, such as Pentacam, examine the posterior and anterior surfaces of the cornea based on a rotating Scheimpflug camera and provide, as output, a set of features for which the clinical interpretation has been error-prone. Objective: Consequently, the objective of this study is to describe a novel Artificial Intelligence (AI) strategy that receives subsets of the 52 original Pentacam tomographic descriptors as input and produces, as output, the scalar value called Corneal Tomography Multivariate Index (CTMVI). Specifically based on Paraconsistent Feature Engineering (PFE) and Support Vector Machine (SVM), it intends to help clinicians in the pre-diagnosis of cornea ectasia risk assessment. Methods: We collected data from patients’ eyes in three different classes: 411 with healthy corneas to compose the control group (CG), 302 with KC to represent the KC group (KCG) and, additionally, 64 in a group with very asymmetric ectasia but with normal corneal topography (VAE-NTG) in one eye, totaling 777 samples. A set of features from the patients’ corneal tomographic assessments was extracted to serve as input to the paraconsistent feature selector algorithm. Once it provides the best subsets of features representing the classes, a one-against-all SVM-based algorithm was successfully used to classify those groups. Notably, normal topography criteria (NTPC) were considered based on the steepest front curvature (Kmax) <47.2 diopters, a paracentral inferior–superior (I–S value) <1.45, and a keratoconus percentage index (KISA%) score <60. Normal corneal tomography (NTMC) consists of an anterior chamber depth <3.8μm, a front corneal apical elevation <4μm, a front corneal elevation (FCE) at the thinnest point <3.8μm, and an FCE <12μm in the corneal 4.0 mm center. Respective back corneal elevation values were 7μm, 13μm, and 25μm. To assess the clinical validity of the models and their abilities to correctly classify new data, two procedures were used: the first was a holdout cross validation, and the second was the external validation consisting of an independent test with samples that were not part of the training data. Results: Notably, PFE-based analysis effectively found dominant representative features which allowed for relevant classification accuracies based on SVM. Among numerous results, a parallel test combining CTMVI and existing Pentacam Random Forest Index (PRFI) produced a value of sensitivity of 0.99 and a value of specificity of 0.84, using 50% of the dataset for system modeling and the remaining 50% for assessment, improving current reports found in the literature. CTMVI, BAD-D, and PRFI showed an accuracy (acc) of 0.89, 0.86, and 0.89, respectively, in the external validation population to distinguish the healthy eyes from subclinical cases. The three indexes resulted in 0.99 acc when used to distinguish healthy eyes from corneal ectasia ones. CTMVI showed 100% sensitivity and 100% specificity between CG and KCG (cutoff ⩽−1.36). Regarding VAE-NTG patients, CTMVI had an area under the curve (AUC) of 0.935 (87.5% sensitivity; 84.95% specificity; cutoff ⩽0.639), which was higher than those of Belin/Ambrósio Enhanced Ectasia Total Deviation Value (BAD D) with AUC 0.765; 78.12% sensitivity; 65.05% specificity; p = .0001, and PRFI with AUC 0.805; 59.38% sensitivity; 90.78% specificity; p = .0004. During the external validation, it was shown to be as effective as BAD and PRFI. Conclusions: Based on the innovative joint application of PFE and SVM to distinguish healthy corneas from those pathologically-affected, we provided an original contribution to the state-of-the-art in terms of AI-aided diagnosis. Therefore, CTMVI improves the detection of corneal ectasia susceptibility using tomographic-derived descriptors. This reassures the efficacy of the proposed approach.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Faculty of Medicine of São José do Rio Preto (FAMERP), São José do Rio Preto, São PauloBase Hospital of São José do Rio Preto (FUNFARME), São José do Rio Preto, São PauloVisum Eye Center, São José do Rio Preto, São PauloInstituto de Biociências Letras e Ciências Exatas Unesp - Univ Estadual Paulista (São Paulo State University), Rua Cristóvão Colombo 2265, Jd Nazareth, 15054-000, São José do Rio Preto - SPInstituto de Biociências Letras e Ciências Exatas Unesp - Univ Estadual Paulista (São Paulo State University), Rua Cristóvão Colombo 2265, Jd Nazareth, 15054-000, São José do Rio Preto - SPFAPESP: 2015/ 17226-7FAPESP: 2015/17226-7FAPESP: 2019/04475-0CNPq: 306808/20018-8Faculty of Medicine of São José do Rio Preto (FAMERP)Base Hospital of São José do Rio Preto (FUNFARME)Visum Eye CenterUniversidade Estadual Paulista (UNESP)de Almeida Jr, Gildasio CastelloGuido, Rodrigo Capobianco [UNESP]Neto, Jogi Suda [UNESP]Rosa, João Marcos [UNESP]Castiglioni, Liliande Mattos, Luiz CarlosBrandão, Cinara Cássia2022-05-01T07:58:41Z2022-05-01T07:58:41Z2021-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1016/j.bspc.2021.102995Biomedical Signal Processing and Control, v. 70.1746-81081746-8094http://hdl.handle.net/11449/23331410.1016/j.bspc.2021.1029952-s2.0-85111268964Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiomedical Signal Processing and Controlinfo:eu-repo/semantics/openAccess2022-05-01T07:58:41Zoai:repositorio.unesp.br:11449/233314Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:15:17.465058Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia |
title |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia |
spellingShingle |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia de Almeida Jr, Gildasio Castello Artificial intelligence Corneal ectasia Corneal topography Keratoconus Paraconsistent feature engineering Support vector machine |
title_short |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia |
title_full |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia |
title_fullStr |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia |
title_full_unstemmed |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia |
title_sort |
Corneal Tomography Multivariate Index (CTMVI) effectively distinguishes healthy corneas from those susceptible to ectasia |
author |
de Almeida Jr, Gildasio Castello |
author_facet |
de Almeida Jr, Gildasio Castello Guido, Rodrigo Capobianco [UNESP] Neto, Jogi Suda [UNESP] Rosa, João Marcos [UNESP] Castiglioni, Lilian de Mattos, Luiz Carlos Brandão, Cinara Cássia |
author_role |
author |
author2 |
Guido, Rodrigo Capobianco [UNESP] Neto, Jogi Suda [UNESP] Rosa, João Marcos [UNESP] Castiglioni, Lilian de Mattos, Luiz Carlos Brandão, Cinara Cássia |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Faculty of Medicine of São José do Rio Preto (FAMERP) Base Hospital of São José do Rio Preto (FUNFARME) Visum Eye Center Universidade Estadual Paulista (UNESP) |
dc.contributor.author.fl_str_mv |
de Almeida Jr, Gildasio Castello Guido, Rodrigo Capobianco [UNESP] Neto, Jogi Suda [UNESP] Rosa, João Marcos [UNESP] Castiglioni, Lilian de Mattos, Luiz Carlos Brandão, Cinara Cássia |
dc.subject.por.fl_str_mv |
Artificial intelligence Corneal ectasia Corneal topography Keratoconus Paraconsistent feature engineering Support vector machine |
topic |
Artificial intelligence Corneal ectasia Corneal topography Keratoconus Paraconsistent feature engineering Support vector machine |
description |
Background: Keratoconus (KC) is a multifactorial progressive corneal disease, pathogenically characterized by genetic, biochemical, and environmental key factors. Nevertheless, current tools used for its diagnosis, such as Pentacam, examine the posterior and anterior surfaces of the cornea based on a rotating Scheimpflug camera and provide, as output, a set of features for which the clinical interpretation has been error-prone. Objective: Consequently, the objective of this study is to describe a novel Artificial Intelligence (AI) strategy that receives subsets of the 52 original Pentacam tomographic descriptors as input and produces, as output, the scalar value called Corneal Tomography Multivariate Index (CTMVI). Specifically based on Paraconsistent Feature Engineering (PFE) and Support Vector Machine (SVM), it intends to help clinicians in the pre-diagnosis of cornea ectasia risk assessment. Methods: We collected data from patients’ eyes in three different classes: 411 with healthy corneas to compose the control group (CG), 302 with KC to represent the KC group (KCG) and, additionally, 64 in a group with very asymmetric ectasia but with normal corneal topography (VAE-NTG) in one eye, totaling 777 samples. A set of features from the patients’ corneal tomographic assessments was extracted to serve as input to the paraconsistent feature selector algorithm. Once it provides the best subsets of features representing the classes, a one-against-all SVM-based algorithm was successfully used to classify those groups. Notably, normal topography criteria (NTPC) were considered based on the steepest front curvature (Kmax) <47.2 diopters, a paracentral inferior–superior (I–S value) <1.45, and a keratoconus percentage index (KISA%) score <60. Normal corneal tomography (NTMC) consists of an anterior chamber depth <3.8μm, a front corneal apical elevation <4μm, a front corneal elevation (FCE) at the thinnest point <3.8μm, and an FCE <12μm in the corneal 4.0 mm center. Respective back corneal elevation values were 7μm, 13μm, and 25μm. To assess the clinical validity of the models and their abilities to correctly classify new data, two procedures were used: the first was a holdout cross validation, and the second was the external validation consisting of an independent test with samples that were not part of the training data. Results: Notably, PFE-based analysis effectively found dominant representative features which allowed for relevant classification accuracies based on SVM. Among numerous results, a parallel test combining CTMVI and existing Pentacam Random Forest Index (PRFI) produced a value of sensitivity of 0.99 and a value of specificity of 0.84, using 50% of the dataset for system modeling and the remaining 50% for assessment, improving current reports found in the literature. CTMVI, BAD-D, and PRFI showed an accuracy (acc) of 0.89, 0.86, and 0.89, respectively, in the external validation population to distinguish the healthy eyes from subclinical cases. The three indexes resulted in 0.99 acc when used to distinguish healthy eyes from corneal ectasia ones. CTMVI showed 100% sensitivity and 100% specificity between CG and KCG (cutoff ⩽−1.36). Regarding VAE-NTG patients, CTMVI had an area under the curve (AUC) of 0.935 (87.5% sensitivity; 84.95% specificity; cutoff ⩽0.639), which was higher than those of Belin/Ambrósio Enhanced Ectasia Total Deviation Value (BAD D) with AUC 0.765; 78.12% sensitivity; 65.05% specificity; p = .0001, and PRFI with AUC 0.805; 59.38% sensitivity; 90.78% specificity; p = .0004. During the external validation, it was shown to be as effective as BAD and PRFI. Conclusions: Based on the innovative joint application of PFE and SVM to distinguish healthy corneas from those pathologically-affected, we provided an original contribution to the state-of-the-art in terms of AI-aided diagnosis. Therefore, CTMVI improves the detection of corneal ectasia susceptibility using tomographic-derived descriptors. This reassures the efficacy of the proposed approach. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-09-01 2022-05-01T07:58:41Z 2022-05-01T07:58:41Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.bspc.2021.102995 Biomedical Signal Processing and Control, v. 70. 1746-8108 1746-8094 http://hdl.handle.net/11449/233314 10.1016/j.bspc.2021.102995 2-s2.0-85111268964 |
url |
http://dx.doi.org/10.1016/j.bspc.2021.102995 http://hdl.handle.net/11449/233314 |
identifier_str_mv |
Biomedical Signal Processing and Control, v. 70. 1746-8108 1746-8094 10.1016/j.bspc.2021.102995 2-s2.0-85111268964 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Biomedical Signal Processing and Control |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128221293576192 |