Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)

Detalhes bibliográficos
Autor(a) principal: Araujo, Bruno C.
Data de Publicação: 2018
Outros Autores: Wade, Nicholas M., Mello, Paulo H. de, Rodrigues-Filho, Jandyr de A., Garcia, Carlos E. O., Campos, Mariana F. de, Botwright, Natasha A., Hashimoto, Diogo T. [UNESP], Moreira, Renata G.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.cbpa.2018.01.018
http://hdl.handle.net/11449/164136
Resumo: Dusky grouper is an important commercial fish species in many countries, but some factors such as overfishing has significantly reduced their natural stocks. Aquaculture emerges as a unique way to conserve this species, but very little biological information is available, limiting the production of this endangered species. To understand and generate more knowledge about this species, liver transcriptome sequencing and de novo assembly was performed for E. marginatus by Next Generation Sequencing (NGS). Sequences obtained were used as a tool to validate the presence of key genes relevant to lipid metabolism, and their expression was quantified by qPCR. Moreover, we investigated the influence of supplementing different dietary fatty acids on hepatic lipid metabolism. The results showed that the different fatty acids added to the diet dramatically changed the gene expression of some key enzymes associated with lipid metabolism as well as hepatic fatty acid profiles. Elongase 5 gene expression was shown to influence intermediate hepatic fatty acid elongation in all experimental groups. Hepatic triglycerides reflected the diet composition more than hepatic phospholipids, and were characterized mainly by the high percentage of 18:3n3 in animals fed with a linseed oil rich diet. Results for the saturated and monounsaturated fatty acids suggest a self-regulatory potential for retention and oxidation processes in liver, since in general the tissues did not directly reflect these fatty acid diet compositions. These results indicated that genes involved in lipid metabolism pathways might be potential biomarkers to assess lipid requirements in the formulated diet for this species.
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spelling Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)Dusky grouperElongationGene expressionLipid metabolismLiverTranscriptomeNext generation sequencePhospholipidsTriglyceridesDusky grouper is an important commercial fish species in many countries, but some factors such as overfishing has significantly reduced their natural stocks. Aquaculture emerges as a unique way to conserve this species, but very little biological information is available, limiting the production of this endangered species. To understand and generate more knowledge about this species, liver transcriptome sequencing and de novo assembly was performed for E. marginatus by Next Generation Sequencing (NGS). Sequences obtained were used as a tool to validate the presence of key genes relevant to lipid metabolism, and their expression was quantified by qPCR. Moreover, we investigated the influence of supplementing different dietary fatty acids on hepatic lipid metabolism. The results showed that the different fatty acids added to the diet dramatically changed the gene expression of some key enzymes associated with lipid metabolism as well as hepatic fatty acid profiles. Elongase 5 gene expression was shown to influence intermediate hepatic fatty acid elongation in all experimental groups. Hepatic triglycerides reflected the diet composition more than hepatic phospholipids, and were characterized mainly by the high percentage of 18:3n3 in animals fed with a linseed oil rich diet. Results for the saturated and monounsaturated fatty acids suggest a self-regulatory potential for retention and oxidation processes in liver, since in general the tissues did not directly reflect these fatty acid diet compositions. These results indicated that genes involved in lipid metabolism pathways might be potential biomarkers to assess lipid requirements in the formulated diet for this species.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Marine Biology Center of University of Sao Paulo (CEBIMar)Univ Sao Paulo, Dept Fisiol, Inst Biociencias, Rua Matao,Trav 14,321, BR-05508090 Sao Paulo, SP, BrazilUniv Sao Paulo CEBIMar USP, Ctr Biol Marinha, Rodovia Manoel Hipolito do Rego,Km 131,5, BR-11600000 Sao Sebastiao, SP, BrazilCSIRO Agr & Food, Queensland Biosci Precinct, 306 Carmody Rd, St Lucia, Qld 4067, AustraliaFundacao Inst Pesca Estado Rio de Janeiro, Praca Fonseca Ramos S-N, BR-24030020 Niteroi, RJ, BrazilUniv Estadual Paulista, Ctr Aquicultura CAUNESP, Via Acesso Prof Paulo Donato Castelane S-N, BR-14884900 Jaboticabal, SP, BrazilUniv Estadual Paulista, Ctr Aquicultura CAUNESP, Via Acesso Prof Paulo Donato Castelane S-N, BR-14884900 Jaboticabal, SP, BrazilFAPESP: 2011/504074FAPESP: 2011/50287-2Elsevier B.V.Universidade de São Paulo (USP)CSIRO Agr & FoodFundacao Inst Pesca Estado Rio de JaneiroUniversidade Estadual Paulista (Unesp)Araujo, Bruno C.Wade, Nicholas M.Mello, Paulo H. deRodrigues-Filho, Jandyr de A.Garcia, Carlos E. O.Campos, Mariana F. deBotwright, Natasha A.Hashimoto, Diogo T. [UNESP]Moreira, Renata G.2018-11-26T17:49:15Z2018-11-26T17:49:15Z2018-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-9application/pdfhttp://dx.doi.org/10.1016/j.cbpa.2018.01.018Comparative Biochemistry And Physiology A-molecular & Integrative Physiology. New York: Elsevier Science Inc, v. 219, p. 1-9, 2018.1095-6433http://hdl.handle.net/11449/16413610.1016/j.cbpa.2018.01.018WOS:000430901900001WOS000430901900001.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengComparative Biochemistry And Physiology A-molecular & Integrative Physiology0,836info:eu-repo/semantics/openAccess2024-04-09T15:10:26Zoai:repositorio.unesp.br:11449/164136Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T13:58:05.121481Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
title Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
spellingShingle Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
Araujo, Bruno C.
Dusky grouper
Elongation
Gene expression
Lipid metabolism
Liver
Transcriptome
Next generation sequence
Phospholipids
Triglycerides
title_short Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
title_full Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
title_fullStr Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
title_full_unstemmed Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
title_sort Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
author Araujo, Bruno C.
author_facet Araujo, Bruno C.
Wade, Nicholas M.
Mello, Paulo H. de
Rodrigues-Filho, Jandyr de A.
Garcia, Carlos E. O.
Campos, Mariana F. de
Botwright, Natasha A.
Hashimoto, Diogo T. [UNESP]
Moreira, Renata G.
author_role author
author2 Wade, Nicholas M.
Mello, Paulo H. de
Rodrigues-Filho, Jandyr de A.
Garcia, Carlos E. O.
Campos, Mariana F. de
Botwright, Natasha A.
Hashimoto, Diogo T. [UNESP]
Moreira, Renata G.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
CSIRO Agr & Food
Fundacao Inst Pesca Estado Rio de Janeiro
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Araujo, Bruno C.
Wade, Nicholas M.
Mello, Paulo H. de
Rodrigues-Filho, Jandyr de A.
Garcia, Carlos E. O.
Campos, Mariana F. de
Botwright, Natasha A.
Hashimoto, Diogo T. [UNESP]
Moreira, Renata G.
dc.subject.por.fl_str_mv Dusky grouper
Elongation
Gene expression
Lipid metabolism
Liver
Transcriptome
Next generation sequence
Phospholipids
Triglycerides
topic Dusky grouper
Elongation
Gene expression
Lipid metabolism
Liver
Transcriptome
Next generation sequence
Phospholipids
Triglycerides
description Dusky grouper is an important commercial fish species in many countries, but some factors such as overfishing has significantly reduced their natural stocks. Aquaculture emerges as a unique way to conserve this species, but very little biological information is available, limiting the production of this endangered species. To understand and generate more knowledge about this species, liver transcriptome sequencing and de novo assembly was performed for E. marginatus by Next Generation Sequencing (NGS). Sequences obtained were used as a tool to validate the presence of key genes relevant to lipid metabolism, and their expression was quantified by qPCR. Moreover, we investigated the influence of supplementing different dietary fatty acids on hepatic lipid metabolism. The results showed that the different fatty acids added to the diet dramatically changed the gene expression of some key enzymes associated with lipid metabolism as well as hepatic fatty acid profiles. Elongase 5 gene expression was shown to influence intermediate hepatic fatty acid elongation in all experimental groups. Hepatic triglycerides reflected the diet composition more than hepatic phospholipids, and were characterized mainly by the high percentage of 18:3n3 in animals fed with a linseed oil rich diet. Results for the saturated and monounsaturated fatty acids suggest a self-regulatory potential for retention and oxidation processes in liver, since in general the tissues did not directly reflect these fatty acid diet compositions. These results indicated that genes involved in lipid metabolism pathways might be potential biomarkers to assess lipid requirements in the formulated diet for this species.
publishDate 2018
dc.date.none.fl_str_mv 2018-11-26T17:49:15Z
2018-11-26T17:49:15Z
2018-05-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.cbpa.2018.01.018
Comparative Biochemistry And Physiology A-molecular & Integrative Physiology. New York: Elsevier Science Inc, v. 219, p. 1-9, 2018.
1095-6433
http://hdl.handle.net/11449/164136
10.1016/j.cbpa.2018.01.018
WOS:000430901900001
WOS000430901900001.pdf
url http://dx.doi.org/10.1016/j.cbpa.2018.01.018
http://hdl.handle.net/11449/164136
identifier_str_mv Comparative Biochemistry And Physiology A-molecular & Integrative Physiology. New York: Elsevier Science Inc, v. 219, p. 1-9, 2018.
1095-6433
10.1016/j.cbpa.2018.01.018
WOS:000430901900001
WOS000430901900001.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Comparative Biochemistry And Physiology A-molecular & Integrative Physiology
0,836
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1-9
application/pdf
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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