Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)
Autor(a) principal: | |
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Data de Publicação: | 2018 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.cbpa.2018.01.018 http://hdl.handle.net/11449/164136 |
Resumo: | Dusky grouper is an important commercial fish species in many countries, but some factors such as overfishing has significantly reduced their natural stocks. Aquaculture emerges as a unique way to conserve this species, but very little biological information is available, limiting the production of this endangered species. To understand and generate more knowledge about this species, liver transcriptome sequencing and de novo assembly was performed for E. marginatus by Next Generation Sequencing (NGS). Sequences obtained were used as a tool to validate the presence of key genes relevant to lipid metabolism, and their expression was quantified by qPCR. Moreover, we investigated the influence of supplementing different dietary fatty acids on hepatic lipid metabolism. The results showed that the different fatty acids added to the diet dramatically changed the gene expression of some key enzymes associated with lipid metabolism as well as hepatic fatty acid profiles. Elongase 5 gene expression was shown to influence intermediate hepatic fatty acid elongation in all experimental groups. Hepatic triglycerides reflected the diet composition more than hepatic phospholipids, and were characterized mainly by the high percentage of 18:3n3 in animals fed with a linseed oil rich diet. Results for the saturated and monounsaturated fatty acids suggest a self-regulatory potential for retention and oxidation processes in liver, since in general the tissues did not directly reflect these fatty acid diet compositions. These results indicated that genes involved in lipid metabolism pathways might be potential biomarkers to assess lipid requirements in the formulated diet for this species. |
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Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus)Dusky grouperElongationGene expressionLipid metabolismLiverTranscriptomeNext generation sequencePhospholipidsTriglyceridesDusky grouper is an important commercial fish species in many countries, but some factors such as overfishing has significantly reduced their natural stocks. Aquaculture emerges as a unique way to conserve this species, but very little biological information is available, limiting the production of this endangered species. To understand and generate more knowledge about this species, liver transcriptome sequencing and de novo assembly was performed for E. marginatus by Next Generation Sequencing (NGS). Sequences obtained were used as a tool to validate the presence of key genes relevant to lipid metabolism, and their expression was quantified by qPCR. Moreover, we investigated the influence of supplementing different dietary fatty acids on hepatic lipid metabolism. The results showed that the different fatty acids added to the diet dramatically changed the gene expression of some key enzymes associated with lipid metabolism as well as hepatic fatty acid profiles. Elongase 5 gene expression was shown to influence intermediate hepatic fatty acid elongation in all experimental groups. Hepatic triglycerides reflected the diet composition more than hepatic phospholipids, and were characterized mainly by the high percentage of 18:3n3 in animals fed with a linseed oil rich diet. Results for the saturated and monounsaturated fatty acids suggest a self-regulatory potential for retention and oxidation processes in liver, since in general the tissues did not directly reflect these fatty acid diet compositions. These results indicated that genes involved in lipid metabolism pathways might be potential biomarkers to assess lipid requirements in the formulated diet for this species.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Marine Biology Center of University of Sao Paulo (CEBIMar)Univ Sao Paulo, Dept Fisiol, Inst Biociencias, Rua Matao,Trav 14,321, BR-05508090 Sao Paulo, SP, BrazilUniv Sao Paulo CEBIMar USP, Ctr Biol Marinha, Rodovia Manoel Hipolito do Rego,Km 131,5, BR-11600000 Sao Sebastiao, SP, BrazilCSIRO Agr & Food, Queensland Biosci Precinct, 306 Carmody Rd, St Lucia, Qld 4067, AustraliaFundacao Inst Pesca Estado Rio de Janeiro, Praca Fonseca Ramos S-N, BR-24030020 Niteroi, RJ, BrazilUniv Estadual Paulista, Ctr Aquicultura CAUNESP, Via Acesso Prof Paulo Donato Castelane S-N, BR-14884900 Jaboticabal, SP, BrazilUniv Estadual Paulista, Ctr Aquicultura CAUNESP, Via Acesso Prof Paulo Donato Castelane S-N, BR-14884900 Jaboticabal, SP, BrazilFAPESP: 2011/504074FAPESP: 2011/50287-2Elsevier B.V.Universidade de São Paulo (USP)CSIRO Agr & FoodFundacao Inst Pesca Estado Rio de JaneiroUniversidade Estadual Paulista (Unesp)Araujo, Bruno C.Wade, Nicholas M.Mello, Paulo H. deRodrigues-Filho, Jandyr de A.Garcia, Carlos E. O.Campos, Mariana F. deBotwright, Natasha A.Hashimoto, Diogo T. [UNESP]Moreira, Renata G.2018-11-26T17:49:15Z2018-11-26T17:49:15Z2018-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-9application/pdfhttp://dx.doi.org/10.1016/j.cbpa.2018.01.018Comparative Biochemistry And Physiology A-molecular & Integrative Physiology. New York: Elsevier Science Inc, v. 219, p. 1-9, 2018.1095-6433http://hdl.handle.net/11449/16413610.1016/j.cbpa.2018.01.018WOS:000430901900001WOS000430901900001.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengComparative Biochemistry And Physiology A-molecular & Integrative Physiology0,836info:eu-repo/semantics/openAccess2024-04-09T15:10:26Zoai:repositorio.unesp.br:11449/164136Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T13:58:05.121481Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) |
title |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) |
spellingShingle |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) Araujo, Bruno C. Dusky grouper Elongation Gene expression Lipid metabolism Liver Transcriptome Next generation sequence Phospholipids Triglycerides |
title_short |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) |
title_full |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) |
title_fullStr |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) |
title_full_unstemmed |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) |
title_sort |
Characterization of lipid metabolism genes and the influence of fatty acid supplementation in the hepatic lipid metabolism of dusky grouper (Epinephelus marginatus) |
author |
Araujo, Bruno C. |
author_facet |
Araujo, Bruno C. Wade, Nicholas M. Mello, Paulo H. de Rodrigues-Filho, Jandyr de A. Garcia, Carlos E. O. Campos, Mariana F. de Botwright, Natasha A. Hashimoto, Diogo T. [UNESP] Moreira, Renata G. |
author_role |
author |
author2 |
Wade, Nicholas M. Mello, Paulo H. de Rodrigues-Filho, Jandyr de A. Garcia, Carlos E. O. Campos, Mariana F. de Botwright, Natasha A. Hashimoto, Diogo T. [UNESP] Moreira, Renata G. |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade de São Paulo (USP) CSIRO Agr & Food Fundacao Inst Pesca Estado Rio de Janeiro Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Araujo, Bruno C. Wade, Nicholas M. Mello, Paulo H. de Rodrigues-Filho, Jandyr de A. Garcia, Carlos E. O. Campos, Mariana F. de Botwright, Natasha A. Hashimoto, Diogo T. [UNESP] Moreira, Renata G. |
dc.subject.por.fl_str_mv |
Dusky grouper Elongation Gene expression Lipid metabolism Liver Transcriptome Next generation sequence Phospholipids Triglycerides |
topic |
Dusky grouper Elongation Gene expression Lipid metabolism Liver Transcriptome Next generation sequence Phospholipids Triglycerides |
description |
Dusky grouper is an important commercial fish species in many countries, but some factors such as overfishing has significantly reduced their natural stocks. Aquaculture emerges as a unique way to conserve this species, but very little biological information is available, limiting the production of this endangered species. To understand and generate more knowledge about this species, liver transcriptome sequencing and de novo assembly was performed for E. marginatus by Next Generation Sequencing (NGS). Sequences obtained were used as a tool to validate the presence of key genes relevant to lipid metabolism, and their expression was quantified by qPCR. Moreover, we investigated the influence of supplementing different dietary fatty acids on hepatic lipid metabolism. The results showed that the different fatty acids added to the diet dramatically changed the gene expression of some key enzymes associated with lipid metabolism as well as hepatic fatty acid profiles. Elongase 5 gene expression was shown to influence intermediate hepatic fatty acid elongation in all experimental groups. Hepatic triglycerides reflected the diet composition more than hepatic phospholipids, and were characterized mainly by the high percentage of 18:3n3 in animals fed with a linseed oil rich diet. Results for the saturated and monounsaturated fatty acids suggest a self-regulatory potential for retention and oxidation processes in liver, since in general the tissues did not directly reflect these fatty acid diet compositions. These results indicated that genes involved in lipid metabolism pathways might be potential biomarkers to assess lipid requirements in the formulated diet for this species. |
publishDate |
2018 |
dc.date.none.fl_str_mv |
2018-11-26T17:49:15Z 2018-11-26T17:49:15Z 2018-05-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.cbpa.2018.01.018 Comparative Biochemistry And Physiology A-molecular & Integrative Physiology. New York: Elsevier Science Inc, v. 219, p. 1-9, 2018. 1095-6433 http://hdl.handle.net/11449/164136 10.1016/j.cbpa.2018.01.018 WOS:000430901900001 WOS000430901900001.pdf |
url |
http://dx.doi.org/10.1016/j.cbpa.2018.01.018 http://hdl.handle.net/11449/164136 |
identifier_str_mv |
Comparative Biochemistry And Physiology A-molecular & Integrative Physiology. New York: Elsevier Science Inc, v. 219, p. 1-9, 2018. 1095-6433 10.1016/j.cbpa.2018.01.018 WOS:000430901900001 WOS000430901900001.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Comparative Biochemistry And Physiology A-molecular & Integrative Physiology 0,836 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1-9 application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier B.V. |
publisher.none.fl_str_mv |
Elsevier B.V. |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128297423339520 |