A machine learning prediction model for waiting time to kidney transplant
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1371/journal.pone.0252069 http://hdl.handle.net/11449/206356 |
Resumo: | Background Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. Methods A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. Results Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). Conclusion The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant. |
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A machine learning prediction model for waiting time to kidney transplantBackground Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. Methods A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. Results Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). Conclusion The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant.Department of Internal Medicine UNESP Univ Estadual PaulistaTransplant Unit–Santa Casa Juiz de ForaKidney-Pancreas Transplantation Service of Leforte and Oswaldo Cruz HospitalsTransplant Unit DivisionTransplant Unit Division LiberdadeDepartment of Internal Medicine UNESP Univ Estadual PaulistaUniversidade Estadual Paulista (Unesp)Transplant Unit–Santa Casa Juiz de ForaKidney-Pancreas Transplantation Service of Leforte and Oswaldo Cruz HospitalsTransplant Unit DivisionLiberdadeSapiertein Silva, Juliana Feiman [UNESP]Ferreira, Gustavo FernandesPerosa, MarceloNga, Hong Si [UNESP]de Andrade, Luis Gustavo Modelli [UNESP]2021-06-25T10:30:44Z2021-06-25T10:30:44Z2021-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1371/journal.pone.0252069PLoS ONE, v. 16, n. 5 May, 2021.1932-6203http://hdl.handle.net/11449/20635610.1371/journal.pone.02520692-s2.0-85106011193Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPLoS ONEinfo:eu-repo/semantics/openAccess2021-10-23T04:16:00Zoai:repositorio.unesp.br:11449/206356Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:01:09.123812Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
A machine learning prediction model for waiting time to kidney transplant |
title |
A machine learning prediction model for waiting time to kidney transplant |
spellingShingle |
A machine learning prediction model for waiting time to kidney transplant Sapiertein Silva, Juliana Feiman [UNESP] |
title_short |
A machine learning prediction model for waiting time to kidney transplant |
title_full |
A machine learning prediction model for waiting time to kidney transplant |
title_fullStr |
A machine learning prediction model for waiting time to kidney transplant |
title_full_unstemmed |
A machine learning prediction model for waiting time to kidney transplant |
title_sort |
A machine learning prediction model for waiting time to kidney transplant |
author |
Sapiertein Silva, Juliana Feiman [UNESP] |
author_facet |
Sapiertein Silva, Juliana Feiman [UNESP] Ferreira, Gustavo Fernandes Perosa, Marcelo Nga, Hong Si [UNESP] de Andrade, Luis Gustavo Modelli [UNESP] |
author_role |
author |
author2 |
Ferreira, Gustavo Fernandes Perosa, Marcelo Nga, Hong Si [UNESP] de Andrade, Luis Gustavo Modelli [UNESP] |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Transplant Unit–Santa Casa Juiz de Fora Kidney-Pancreas Transplantation Service of Leforte and Oswaldo Cruz Hospitals Transplant Unit Division Liberdade |
dc.contributor.author.fl_str_mv |
Sapiertein Silva, Juliana Feiman [UNESP] Ferreira, Gustavo Fernandes Perosa, Marcelo Nga, Hong Si [UNESP] de Andrade, Luis Gustavo Modelli [UNESP] |
description |
Background Predicting waiting time for a deceased donor kidney transplant can help patients and clinicians to discuss management and contribute to a more efficient use of resources. This study aimed at developing a predictor model to estimate time on a kidney transplant waiting list using a machine learning approach. Methods A retrospective cohort study including data of patients registered, between January 1, 2000 and December 31, 2017, in the waiting list of São Paulo State Organ Allocation System (SP-OAS) /Brazil. Data were randomly divided into two groups: 75% for training and 25% for testing. A Cox regression model was fitted with deceased donor transplant as the outcome. Sensitivity analyses were performed using different Cox models. Cox hazard ratios were used to develop the risk-prediction equations. Results Of 54,055 records retrieved, 48,153 registries were included in the final analysis. During the study period, approximately 1/3 of the patients were transplanted with a deceased donor. The major characteristics associated with changes in the likelihood of transplantation were age, subregion, cPRA, and frequency of HLA-DR, -B and -A. The model developed was able to predict waiting time with good agreement in internal validation (c-index = 0.70). Conclusion The kidney transplant waiting time calculator developed shows good predictive performance and provides information that may be valuable in assisting candidates and their providers. Moreover, it can significantly improve the use of economic resources and the management of patient care before transplant. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06-25T10:30:44Z 2021-06-25T10:30:44Z 2021-05-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1371/journal.pone.0252069 PLoS ONE, v. 16, n. 5 May, 2021. 1932-6203 http://hdl.handle.net/11449/206356 10.1371/journal.pone.0252069 2-s2.0-85106011193 |
url |
http://dx.doi.org/10.1371/journal.pone.0252069 http://hdl.handle.net/11449/206356 |
identifier_str_mv |
PLoS ONE, v. 16, n. 5 May, 2021. 1932-6203 10.1371/journal.pone.0252069 2-s2.0-85106011193 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
PLoS ONE |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
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1808129149781409792 |