The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)

Detalhes bibliográficos
Autor(a) principal: Taucce, Pedro P. G. [UNESP]
Data de Publicação: 2018
Outros Autores: Canedo, Clarissa, Haddad, Célio F. B. [UNESP], Lemmon, Alan L., Lemmon, Emily M., Vences, Miguel, Lyra, Mariana [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1080/23802359.2018.1501312
http://hdl.handle.net/11449/176723
Resumo: We report the mitogenomes for five species of the Ischnocnema guentheri series, being the first described for this genus of brachycephalid frogs. We assembled mitogenomes from anchored hybrid enrichment data and recovered the 13 protein-coding genes, 22 tRNA genes, and two rRNA genes for all species. The general structure agrees with most previously sequenced neobatrachians, with two exceptions: the origin of replication of L-strand (OL) was found between tRNA-A and tRNA-N, and the position of tRNA-L and tRNA-T, which are dispersed in the control region. We provide a phylogenetic tree with outgroups, which is consistent with previous phylogenetic hypotheses.
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spelling The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)AmphibiaBrazilIschnocnema guentheri seriesmitogenomesTerraranaWe report the mitogenomes for five species of the Ischnocnema guentheri series, being the first described for this genus of brachycephalid frogs. We assembled mitogenomes from anchored hybrid enrichment data and recovered the 13 protein-coding genes, 22 tRNA genes, and two rRNA genes for all species. The general structure agrees with most previously sequenced neobatrachians, with two exceptions: the origin of replication of L-strand (OL) was found between tRNA-A and tRNA-N, and the position of tRNA-L and tRNA-T, which are dispersed in the control region. We provide a phylogenetic tree with outgroups, which is consistent with previous phylogenetic hypotheses.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Department of Zoology and Aquaculture Center (CAUNESP) Biosciences Institute São Paulo State University–UNESPDepartment of Zoology Instituto de Biologia Roberto Alcântara Gomes Rio de Janeiro State University–UERJDepartment of Scientific Computing Florida State UniversityDepartment of Biological Science Florida State UniversityZoological Institute Technical University of BraunschweigDepartment of Zoology and Aquaculture Center (CAUNESP) Biosciences Institute São Paulo State University–UNESPCNPq: #88881.062205/2014-01CNPq: 302518/2013-4Universidade Estadual Paulista (Unesp)Universidade do Estado do Rio de Janeiro (UERJ)Florida State UniversityZoological Institute Technical University of BraunschweigTaucce, Pedro P. G. [UNESP]Canedo, ClarissaHaddad, Célio F. B. [UNESP]Lemmon, Alan L.Lemmon, Emily M.Vences, MiguelLyra, Mariana [UNESP]2018-12-11T17:22:13Z2018-12-11T17:22:13Z2018-07-03info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article917-919application/pdfhttp://dx.doi.org/10.1080/23802359.2018.1501312Mitochondrial DNA Part B: Resources, v. 3, n. 2, p. 917-919, 2018.2380-2359http://hdl.handle.net/11449/17672310.1080/23802359.2018.15013122-s2.0-850517167272-s2.0-85051716727.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMitochondrial DNA Part B: Resources0,180info:eu-repo/semantics/openAccess2024-04-09T15:10:46Zoai:repositorio.unesp.br:11449/176723Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:17:15.320370Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
title The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
spellingShingle The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
Taucce, Pedro P. G. [UNESP]
Amphibia
Brazil
Ischnocnema guentheri series
mitogenomes
Terrarana
title_short The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
title_full The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
title_fullStr The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
title_full_unstemmed The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
title_sort The mitochondrial genomes of five frog species of the Neotropical genus Ischnocnema (Anura: Brachycephaloidea: Brachycephalidae)
author Taucce, Pedro P. G. [UNESP]
author_facet Taucce, Pedro P. G. [UNESP]
Canedo, Clarissa
Haddad, Célio F. B. [UNESP]
Lemmon, Alan L.
Lemmon, Emily M.
Vences, Miguel
Lyra, Mariana [UNESP]
author_role author
author2 Canedo, Clarissa
Haddad, Célio F. B. [UNESP]
Lemmon, Alan L.
Lemmon, Emily M.
Vences, Miguel
Lyra, Mariana [UNESP]
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade do Estado do Rio de Janeiro (UERJ)
Florida State University
Zoological Institute Technical University of Braunschweig
dc.contributor.author.fl_str_mv Taucce, Pedro P. G. [UNESP]
Canedo, Clarissa
Haddad, Célio F. B. [UNESP]
Lemmon, Alan L.
Lemmon, Emily M.
Vences, Miguel
Lyra, Mariana [UNESP]
dc.subject.por.fl_str_mv Amphibia
Brazil
Ischnocnema guentheri series
mitogenomes
Terrarana
topic Amphibia
Brazil
Ischnocnema guentheri series
mitogenomes
Terrarana
description We report the mitogenomes for five species of the Ischnocnema guentheri series, being the first described for this genus of brachycephalid frogs. We assembled mitogenomes from anchored hybrid enrichment data and recovered the 13 protein-coding genes, 22 tRNA genes, and two rRNA genes for all species. The general structure agrees with most previously sequenced neobatrachians, with two exceptions: the origin of replication of L-strand (OL) was found between tRNA-A and tRNA-N, and the position of tRNA-L and tRNA-T, which are dispersed in the control region. We provide a phylogenetic tree with outgroups, which is consistent with previous phylogenetic hypotheses.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-11T17:22:13Z
2018-12-11T17:22:13Z
2018-07-03
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1080/23802359.2018.1501312
Mitochondrial DNA Part B: Resources, v. 3, n. 2, p. 917-919, 2018.
2380-2359
http://hdl.handle.net/11449/176723
10.1080/23802359.2018.1501312
2-s2.0-85051716727
2-s2.0-85051716727.pdf
url http://dx.doi.org/10.1080/23802359.2018.1501312
http://hdl.handle.net/11449/176723
identifier_str_mv Mitochondrial DNA Part B: Resources, v. 3, n. 2, p. 917-919, 2018.
2380-2359
10.1080/23802359.2018.1501312
2-s2.0-85051716727
2-s2.0-85051716727.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mitochondrial DNA Part B: Resources
0,180
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 917-919
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808128493800652800

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