Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.toxicon.2017.02.004 http://hdl.handle.net/11449/162627 |
Resumo: | Theraphosidae spider venoms are well known for possess a complex mixture of protein and non -protein compounds in their venom. The objective of this study was to report and identify different proteins translated from the venom gland DNA information of the recently described Theraphosidae spider Pamphobeteus verdolaga. Using a venom gland transcriptomic analysis, we reported a set of the first complete sequences of seven different proteins of the recenity described Theraphosidae spider P. verdolaga. Protein analysis indicates the presence of different proteins on the venom composition of this new spider, some of them uncommon in the Theraphosidae family. MS/MS analysis of P. verdolaga showed different fragments matching sphingomyelinases (sicaritoxin), barytoxins, hexatoxins, latroinsectotoxins, and linear (zadotoxins) peptides. Only four of the MS/MS fragments showed 100% sequence similarity with one of the transcribed proteins. Transcriptomic analysis showed the presence of different groups of proteins like phospholipases, hyaluronidases, inhibitory cysteine knots (ICK) peptides among others. The three database of protein domains used in this study (Pfam, SMART and CDD) showed congruency in the search of unique conserved protein domain for only four of the translated proteins. Those proteins matched with EF-hand proteins, cysteine rich secretory proteins, jingzhaotoxins, theraphotoxins and hexatoxins, from different Mygalomorphae spiders belonging to the families Theraphosidae, Barychelidae and Hexathelidae. None of the analyzed sequences showed a complete 100% similarity. (C) 2017 Elsevier Ltd. All rights reserved. |
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Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolagaPamphobeteus verdolagaTheraphosidaeTranscriptomicProteomicTheraphosidae spider venoms are well known for possess a complex mixture of protein and non -protein compounds in their venom. The objective of this study was to report and identify different proteins translated from the venom gland DNA information of the recently described Theraphosidae spider Pamphobeteus verdolaga. Using a venom gland transcriptomic analysis, we reported a set of the first complete sequences of seven different proteins of the recenity described Theraphosidae spider P. verdolaga. Protein analysis indicates the presence of different proteins on the venom composition of this new spider, some of them uncommon in the Theraphosidae family. MS/MS analysis of P. verdolaga showed different fragments matching sphingomyelinases (sicaritoxin), barytoxins, hexatoxins, latroinsectotoxins, and linear (zadotoxins) peptides. Only four of the MS/MS fragments showed 100% sequence similarity with one of the transcribed proteins. Transcriptomic analysis showed the presence of different groups of proteins like phospholipases, hyaluronidases, inhibitory cysteine knots (ICK) peptides among others. The three database of protein domains used in this study (Pfam, SMART and CDD) showed congruency in the search of unique conserved protein domain for only four of the translated proteins. Those proteins matched with EF-hand proteins, cysteine rich secretory proteins, jingzhaotoxins, theraphotoxins and hexatoxins, from different Mygalomorphae spiders belonging to the families Theraphosidae, Barychelidae and Hexathelidae. None of the analyzed sequences showed a complete 100% similarity. (C) 2017 Elsevier Ltd. All rights reserved.Comite para el Desarrollo de la Investigation (CODI-UdeA)Univ Antioquia UdeA, Programa Ofidismo Escorpionismo Serpentario, Carrera 53 61-30, Medellin 050010, Antioquia, ColombiaUniv Antioquia UdeA, Fac Ciencias Farmaceut & Alimentarias, Calle 70 52-21, Medellin 050010, Antioquia, ColombiaUniv Cooperat Colombia, Fac Med, Calle 50 A 41-20, Medellin 050012, Antioquia, ColombiaUniv Iberoamericana Ciencias & Tecnol, Dept Ciencias, Padre Miguel Olivares, Santiago 1620, ChileUniv Bernardo Higgins, Ctr Invest Recursos Nat & Sustentabilid, Santiago 1990, ChileInst Butantan, Lab Especial Ecol & Evolucao, Ave Vital Brazil 1500, BR-05503900 Sao Paulo, SP, BrazilUniv Estadual Paulista, Programa Posgrad Biol Anim, BR-15054000 Sao Jose Do Rio Preto, SP, BrazilUniv Republica, Fac Ciencias, Secc Entomol, Igua 4225, Montevideo 11400, UruguayUniv Estadual Paulista, Programa Posgrad Biol Anim, BR-15054000 Sao Jose Do Rio Preto, SP, BrazilComite para el Desarrollo de la Investigation (CODI-UdeA): CIQF-211Elsevier B.V.Univ Antioquia UdeAUniv Cooperat ColombiaUniv Iberoamericana Ciencias & TecnolUniv Bernardo HigginsInst ButantanUniversidade Estadual Paulista (Unesp)Univ RepublicaEstrada-Gomez, SebastianJohana Vargas-Munoz, LeidySaldarriaga-Cordoba, MonicaCifuentes, Yeimy [UNESP]Perafan, Carlos2018-11-26T17:21:13Z2018-11-26T17:21:13Z2017-04-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article81-88application/pdfhttp://dx.doi.org/10.1016/j.toxicon.2017.02.004Toxicon. Oxford: Pergamon-elsevier Science Ltd, v. 129, p. 81-88, 2017.0041-0101http://hdl.handle.net/11449/16262710.1016/j.toxicon.2017.02.004WOS:000397685500011WOS000397685500011.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengToxicon0,692info:eu-repo/semantics/openAccess2023-12-27T06:22:01Zoai:repositorio.unesp.br:11449/162627Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:27:18.529951Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga |
title |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga |
spellingShingle |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga Estrada-Gomez, Sebastian Pamphobeteus verdolaga Theraphosidae Transcriptomic Proteomic |
title_short |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga |
title_full |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga |
title_fullStr |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga |
title_full_unstemmed |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga |
title_sort |
Identifying different transcribed proteins in the newly described Theraphosidae Pamphobeteus verdolaga |
author |
Estrada-Gomez, Sebastian |
author_facet |
Estrada-Gomez, Sebastian Johana Vargas-Munoz, Leidy Saldarriaga-Cordoba, Monica Cifuentes, Yeimy [UNESP] Perafan, Carlos |
author_role |
author |
author2 |
Johana Vargas-Munoz, Leidy Saldarriaga-Cordoba, Monica Cifuentes, Yeimy [UNESP] Perafan, Carlos |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Univ Antioquia UdeA Univ Cooperat Colombia Univ Iberoamericana Ciencias & Tecnol Univ Bernardo Higgins Inst Butantan Universidade Estadual Paulista (Unesp) Univ Republica |
dc.contributor.author.fl_str_mv |
Estrada-Gomez, Sebastian Johana Vargas-Munoz, Leidy Saldarriaga-Cordoba, Monica Cifuentes, Yeimy [UNESP] Perafan, Carlos |
dc.subject.por.fl_str_mv |
Pamphobeteus verdolaga Theraphosidae Transcriptomic Proteomic |
topic |
Pamphobeteus verdolaga Theraphosidae Transcriptomic Proteomic |
description |
Theraphosidae spider venoms are well known for possess a complex mixture of protein and non -protein compounds in their venom. The objective of this study was to report and identify different proteins translated from the venom gland DNA information of the recently described Theraphosidae spider Pamphobeteus verdolaga. Using a venom gland transcriptomic analysis, we reported a set of the first complete sequences of seven different proteins of the recenity described Theraphosidae spider P. verdolaga. Protein analysis indicates the presence of different proteins on the venom composition of this new spider, some of them uncommon in the Theraphosidae family. MS/MS analysis of P. verdolaga showed different fragments matching sphingomyelinases (sicaritoxin), barytoxins, hexatoxins, latroinsectotoxins, and linear (zadotoxins) peptides. Only four of the MS/MS fragments showed 100% sequence similarity with one of the transcribed proteins. Transcriptomic analysis showed the presence of different groups of proteins like phospholipases, hyaluronidases, inhibitory cysteine knots (ICK) peptides among others. The three database of protein domains used in this study (Pfam, SMART and CDD) showed congruency in the search of unique conserved protein domain for only four of the translated proteins. Those proteins matched with EF-hand proteins, cysteine rich secretory proteins, jingzhaotoxins, theraphotoxins and hexatoxins, from different Mygalomorphae spiders belonging to the families Theraphosidae, Barychelidae and Hexathelidae. None of the analyzed sequences showed a complete 100% similarity. (C) 2017 Elsevier Ltd. All rights reserved. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-04-01 2018-11-26T17:21:13Z 2018-11-26T17:21:13Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.toxicon.2017.02.004 Toxicon. Oxford: Pergamon-elsevier Science Ltd, v. 129, p. 81-88, 2017. 0041-0101 http://hdl.handle.net/11449/162627 10.1016/j.toxicon.2017.02.004 WOS:000397685500011 WOS000397685500011.pdf |
url |
http://dx.doi.org/10.1016/j.toxicon.2017.02.004 http://hdl.handle.net/11449/162627 |
identifier_str_mv |
Toxicon. Oxford: Pergamon-elsevier Science Ltd, v. 129, p. 81-88, 2017. 0041-0101 10.1016/j.toxicon.2017.02.004 WOS:000397685500011 WOS000397685500011.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Toxicon 0,692 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
81-88 application/pdf |
dc.publisher.none.fl_str_mv |
Elsevier B.V. |
publisher.none.fl_str_mv |
Elsevier B.V. |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129321984851968 |