Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/1676-0611-BN-2020-1134 http://hdl.handle.net/11449/229514 |
Resumo: | The Orinoco Goose (Neochen jubata) is a few-known and endemic Anatidae to South America, inhabiting sandy beaches along medium and large rivers, with a well-developed riparian forest and in swamp savannas and large freshwater baths. Recent data indicate the presence of longitudinal migratory behavior, and despite them, there are no records on the genetic profile of this species. The Araguaia River region, in the municipality of Luiz Alves, Goiás, receives an undetermined number of ducks seasonally, and there is little information about the individuals who visit this place, constituting the ideal scenario for a study able to offer a genetic overview perspective of this species and to understand the relationship between these individuals better. For this, we genetically characterized 61 individuals sampled in three distinct years of collection using microsatellite molecular markers and mitochondrial DNA. Genetic diversity analyses revealed low levels of heterozygosity for all sampled groups. However, they are within the equilibrium proposed by Hardy-Weinberg (HWE), as inbreeding or drift are not acting in these groups. The parentage analysis supports it, showing a high number of unrelated individuals over the years. AMOVA showed a significant difference among groups. These results may reflect the structure of this migratory species in that region, with the paired differentiation test of individuals from 2013 and 2014 being more similar to each other than those from other years, indicating a possible genetic structure diagnosed by the years of capture. However, there is a high allelic sharing among the three sampled groups, suggesting that these individuals are a population that connects over time and that they have a philopatric relationship with the location. The results found in this study constitute an initial milestone for the genetic knowledge of the mallard duck that should be raised in many other genetic studies. |
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Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazilEstrutura populacional e diversidade genética de neochen jubata (Aves: anatidae) no rio araguaia, go, brasilKinshipMicrosatelliteMitochondrial DNAOrinoco GooseStructure population.The Orinoco Goose (Neochen jubata) is a few-known and endemic Anatidae to South America, inhabiting sandy beaches along medium and large rivers, with a well-developed riparian forest and in swamp savannas and large freshwater baths. Recent data indicate the presence of longitudinal migratory behavior, and despite them, there are no records on the genetic profile of this species. The Araguaia River region, in the municipality of Luiz Alves, Goiás, receives an undetermined number of ducks seasonally, and there is little information about the individuals who visit this place, constituting the ideal scenario for a study able to offer a genetic overview perspective of this species and to understand the relationship between these individuals better. For this, we genetically characterized 61 individuals sampled in three distinct years of collection using microsatellite molecular markers and mitochondrial DNA. Genetic diversity analyses revealed low levels of heterozygosity for all sampled groups. However, they are within the equilibrium proposed by Hardy-Weinberg (HWE), as inbreeding or drift are not acting in these groups. The parentage analysis supports it, showing a high number of unrelated individuals over the years. AMOVA showed a significant difference among groups. These results may reflect the structure of this migratory species in that region, with the paired differentiation test of individuals from 2013 and 2014 being more similar to each other than those from other years, indicating a possible genetic structure diagnosed by the years of capture. However, there is a high allelic sharing among the three sampled groups, suggesting that these individuals are a population that connects over time and that they have a philopatric relationship with the location. The results found in this study constitute an initial milestone for the genetic knowledge of the mallard duck that should be raised in many other genetic studies.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Universidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Letras e Ciências Exatas Programa de Pós-Graduação em BiociênciasUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Laboratório de Biologia Evolutiva Departamento de Biologia Aplicada à AgropecuáriaUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Departamento de Patologia VeterináriaUniversidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Letras e Ciências Exatas Programa de Pós-Graduação em BiociênciasUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Laboratório de Biologia Evolutiva Departamento de Biologia Aplicada à AgropecuáriaUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Departamento de Patologia VeterináriaUniversidade Estadual Paulista (UNESP)Pereira, Maria Cecília [UNESP]Coelho, Thaís [UNESP]Werther, Karin [UNESP]Andreazzi, Rafael Biccio [UNESP]Morales, Adriana Coletto [UNESP]2022-04-29T08:33:03Z2022-04-29T08:33:03Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1590/1676-0611-BN-2020-1134Biota Neotropica, v. 21, n. 4, 2021.1676-06111676-0603http://hdl.handle.net/11449/22951410.1590/1676-0611-BN-2020-11342-s2.0-85114856042Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiota Neotropicainfo:eu-repo/semantics/openAccess2024-06-07T13:03:07Zoai:repositorio.unesp.br:11449/229514Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:30:23.930919Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil Estrutura populacional e diversidade genética de neochen jubata (Aves: anatidae) no rio araguaia, go, brasil |
title |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil |
spellingShingle |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil Pereira, Maria Cecília [UNESP] Kinship Microsatellite Mitochondrial DNA Orinoco Goose Structure population. |
title_short |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil |
title_full |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil |
title_fullStr |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil |
title_full_unstemmed |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil |
title_sort |
Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil |
author |
Pereira, Maria Cecília [UNESP] |
author_facet |
Pereira, Maria Cecília [UNESP] Coelho, Thaís [UNESP] Werther, Karin [UNESP] Andreazzi, Rafael Biccio [UNESP] Morales, Adriana Coletto [UNESP] |
author_role |
author |
author2 |
Coelho, Thaís [UNESP] Werther, Karin [UNESP] Andreazzi, Rafael Biccio [UNESP] Morales, Adriana Coletto [UNESP] |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (UNESP) |
dc.contributor.author.fl_str_mv |
Pereira, Maria Cecília [UNESP] Coelho, Thaís [UNESP] Werther, Karin [UNESP] Andreazzi, Rafael Biccio [UNESP] Morales, Adriana Coletto [UNESP] |
dc.subject.por.fl_str_mv |
Kinship Microsatellite Mitochondrial DNA Orinoco Goose Structure population. |
topic |
Kinship Microsatellite Mitochondrial DNA Orinoco Goose Structure population. |
description |
The Orinoco Goose (Neochen jubata) is a few-known and endemic Anatidae to South America, inhabiting sandy beaches along medium and large rivers, with a well-developed riparian forest and in swamp savannas and large freshwater baths. Recent data indicate the presence of longitudinal migratory behavior, and despite them, there are no records on the genetic profile of this species. The Araguaia River region, in the municipality of Luiz Alves, Goiás, receives an undetermined number of ducks seasonally, and there is little information about the individuals who visit this place, constituting the ideal scenario for a study able to offer a genetic overview perspective of this species and to understand the relationship between these individuals better. For this, we genetically characterized 61 individuals sampled in three distinct years of collection using microsatellite molecular markers and mitochondrial DNA. Genetic diversity analyses revealed low levels of heterozygosity for all sampled groups. However, they are within the equilibrium proposed by Hardy-Weinberg (HWE), as inbreeding or drift are not acting in these groups. The parentage analysis supports it, showing a high number of unrelated individuals over the years. AMOVA showed a significant difference among groups. These results may reflect the structure of this migratory species in that region, with the paired differentiation test of individuals from 2013 and 2014 being more similar to each other than those from other years, indicating a possible genetic structure diagnosed by the years of capture. However, there is a high allelic sharing among the three sampled groups, suggesting that these individuals are a population that connects over time and that they have a philopatric relationship with the location. The results found in this study constitute an initial milestone for the genetic knowledge of the mallard duck that should be raised in many other genetic studies. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-01-01 2022-04-29T08:33:03Z 2022-04-29T08:33:03Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/1676-0611-BN-2020-1134 Biota Neotropica, v. 21, n. 4, 2021. 1676-0611 1676-0603 http://hdl.handle.net/11449/229514 10.1590/1676-0611-BN-2020-1134 2-s2.0-85114856042 |
url |
http://dx.doi.org/10.1590/1676-0611-BN-2020-1134 http://hdl.handle.net/11449/229514 |
identifier_str_mv |
Biota Neotropica, v. 21, n. 4, 2021. 1676-0611 1676-0603 10.1590/1676-0611-BN-2020-1134 2-s2.0-85114856042 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Biota Neotropica |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129433483083776 |