Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil

Detalhes bibliográficos
Autor(a) principal: Pereira, Maria Cecília [UNESP]
Data de Publicação: 2021
Outros Autores: Coelho, Thaís [UNESP], Werther, Karin [UNESP], Andreazzi, Rafael Biccio [UNESP], Morales, Adriana Coletto [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/1676-0611-BN-2020-1134
http://hdl.handle.net/11449/229514
Resumo: The Orinoco Goose (Neochen jubata) is a few-known and endemic Anatidae to South America, inhabiting sandy beaches along medium and large rivers, with a well-developed riparian forest and in swamp savannas and large freshwater baths. Recent data indicate the presence of longitudinal migratory behavior, and despite them, there are no records on the genetic profile of this species. The Araguaia River region, in the municipality of Luiz Alves, Goiás, receives an undetermined number of ducks seasonally, and there is little information about the individuals who visit this place, constituting the ideal scenario for a study able to offer a genetic overview perspective of this species and to understand the relationship between these individuals better. For this, we genetically characterized 61 individuals sampled in three distinct years of collection using microsatellite molecular markers and mitochondrial DNA. Genetic diversity analyses revealed low levels of heterozygosity for all sampled groups. However, they are within the equilibrium proposed by Hardy-Weinberg (HWE), as inbreeding or drift are not acting in these groups. The parentage analysis supports it, showing a high number of unrelated individuals over the years. AMOVA showed a significant difference among groups. These results may reflect the structure of this migratory species in that region, with the paired differentiation test of individuals from 2013 and 2014 being more similar to each other than those from other years, indicating a possible genetic structure diagnosed by the years of capture. However, there is a high allelic sharing among the three sampled groups, suggesting that these individuals are a population that connects over time and that they have a philopatric relationship with the location. The results found in this study constitute an initial milestone for the genetic knowledge of the mallard duck that should be raised in many other genetic studies.
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spelling Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazilEstrutura populacional e diversidade genética de neochen jubata (Aves: anatidae) no rio araguaia, go, brasilKinshipMicrosatelliteMitochondrial DNAOrinoco GooseStructure population.The Orinoco Goose (Neochen jubata) is a few-known and endemic Anatidae to South America, inhabiting sandy beaches along medium and large rivers, with a well-developed riparian forest and in swamp savannas and large freshwater baths. Recent data indicate the presence of longitudinal migratory behavior, and despite them, there are no records on the genetic profile of this species. The Araguaia River region, in the municipality of Luiz Alves, Goiás, receives an undetermined number of ducks seasonally, and there is little information about the individuals who visit this place, constituting the ideal scenario for a study able to offer a genetic overview perspective of this species and to understand the relationship between these individuals better. For this, we genetically characterized 61 individuals sampled in three distinct years of collection using microsatellite molecular markers and mitochondrial DNA. Genetic diversity analyses revealed low levels of heterozygosity for all sampled groups. However, they are within the equilibrium proposed by Hardy-Weinberg (HWE), as inbreeding or drift are not acting in these groups. The parentage analysis supports it, showing a high number of unrelated individuals over the years. AMOVA showed a significant difference among groups. These results may reflect the structure of this migratory species in that region, with the paired differentiation test of individuals from 2013 and 2014 being more similar to each other than those from other years, indicating a possible genetic structure diagnosed by the years of capture. However, there is a high allelic sharing among the three sampled groups, suggesting that these individuals are a population that connects over time and that they have a philopatric relationship with the location. The results found in this study constitute an initial milestone for the genetic knowledge of the mallard duck that should be raised in many other genetic studies.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Universidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Letras e Ciências Exatas Programa de Pós-Graduação em BiociênciasUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Laboratório de Biologia Evolutiva Departamento de Biologia Aplicada à AgropecuáriaUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Departamento de Patologia VeterináriaUniversidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Letras e Ciências Exatas Programa de Pós-Graduação em BiociênciasUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Laboratório de Biologia Evolutiva Departamento de Biologia Aplicada à AgropecuáriaUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Departamento de Patologia VeterináriaUniversidade Estadual Paulista (UNESP)Pereira, Maria Cecília [UNESP]Coelho, Thaís [UNESP]Werther, Karin [UNESP]Andreazzi, Rafael Biccio [UNESP]Morales, Adriana Coletto [UNESP]2022-04-29T08:33:03Z2022-04-29T08:33:03Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1590/1676-0611-BN-2020-1134Biota Neotropica, v. 21, n. 4, 2021.1676-06111676-0603http://hdl.handle.net/11449/22951410.1590/1676-0611-BN-2020-11342-s2.0-85114856042Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiota Neotropicainfo:eu-repo/semantics/openAccess2024-06-07T13:03:07Zoai:repositorio.unesp.br:11449/229514Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:30:23.930919Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
Estrutura populacional e diversidade genética de neochen jubata (Aves: anatidae) no rio araguaia, go, brasil
title Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
spellingShingle Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
Pereira, Maria Cecília [UNESP]
Kinship
Microsatellite
Mitochondrial DNA
Orinoco Goose
Structure population.
title_short Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
title_full Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
title_fullStr Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
title_full_unstemmed Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
title_sort Genetic structure and diversity in neochen jubata (Aves: Anatidae) from the araguaia river, go, brazil
author Pereira, Maria Cecília [UNESP]
author_facet Pereira, Maria Cecília [UNESP]
Coelho, Thaís [UNESP]
Werther, Karin [UNESP]
Andreazzi, Rafael Biccio [UNESP]
Morales, Adriana Coletto [UNESP]
author_role author
author2 Coelho, Thaís [UNESP]
Werther, Karin [UNESP]
Andreazzi, Rafael Biccio [UNESP]
Morales, Adriana Coletto [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
dc.contributor.author.fl_str_mv Pereira, Maria Cecília [UNESP]
Coelho, Thaís [UNESP]
Werther, Karin [UNESP]
Andreazzi, Rafael Biccio [UNESP]
Morales, Adriana Coletto [UNESP]
dc.subject.por.fl_str_mv Kinship
Microsatellite
Mitochondrial DNA
Orinoco Goose
Structure population.
topic Kinship
Microsatellite
Mitochondrial DNA
Orinoco Goose
Structure population.
description The Orinoco Goose (Neochen jubata) is a few-known and endemic Anatidae to South America, inhabiting sandy beaches along medium and large rivers, with a well-developed riparian forest and in swamp savannas and large freshwater baths. Recent data indicate the presence of longitudinal migratory behavior, and despite them, there are no records on the genetic profile of this species. The Araguaia River region, in the municipality of Luiz Alves, Goiás, receives an undetermined number of ducks seasonally, and there is little information about the individuals who visit this place, constituting the ideal scenario for a study able to offer a genetic overview perspective of this species and to understand the relationship between these individuals better. For this, we genetically characterized 61 individuals sampled in three distinct years of collection using microsatellite molecular markers and mitochondrial DNA. Genetic diversity analyses revealed low levels of heterozygosity for all sampled groups. However, they are within the equilibrium proposed by Hardy-Weinberg (HWE), as inbreeding or drift are not acting in these groups. The parentage analysis supports it, showing a high number of unrelated individuals over the years. AMOVA showed a significant difference among groups. These results may reflect the structure of this migratory species in that region, with the paired differentiation test of individuals from 2013 and 2014 being more similar to each other than those from other years, indicating a possible genetic structure diagnosed by the years of capture. However, there is a high allelic sharing among the three sampled groups, suggesting that these individuals are a population that connects over time and that they have a philopatric relationship with the location. The results found in this study constitute an initial milestone for the genetic knowledge of the mallard duck that should be raised in many other genetic studies.
publishDate 2021
dc.date.none.fl_str_mv 2021-01-01
2022-04-29T08:33:03Z
2022-04-29T08:33:03Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1676-0611-BN-2020-1134
Biota Neotropica, v. 21, n. 4, 2021.
1676-0611
1676-0603
http://hdl.handle.net/11449/229514
10.1590/1676-0611-BN-2020-1134
2-s2.0-85114856042
url http://dx.doi.org/10.1590/1676-0611-BN-2020-1134
http://hdl.handle.net/11449/229514
identifier_str_mv Biota Neotropica, v. 21, n. 4, 2021.
1676-0611
1676-0603
10.1590/1676-0611-BN-2020-1134
2-s2.0-85114856042
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Biota Neotropica
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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