SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma

Detalhes bibliográficos
Autor(a) principal: Gregory-Evans, Cheryl Y.
Data de Publicação: 2007
Outros Autores: Moosajee, Mariya, Hodges, Matthew D., Mackay, Donna S., Game, Laurence, Vargesson, Neil, Bloch-Zupan, Agnès, Rüschendorf, Franz, Santos-Pinto, Lourdes, Wackens, Georges, Gregory-Evans, Kevin
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1093/hmg/ddm204
http://hdl.handle.net/11449/231047
Resumo: We ascertained three different families affected with oto-dental syndrome, a rare but severe autosomal-dominant craniofacial anomaly. All affected patients had the unique phenotype of grossly enlarged molar teeth (globodontia) segregating with a high-frequency sensorineural hearing loss. In addition, ocular coloboma segregated with disease in one family (oculo-oto-dental syndrome). A genome-wide scan was performed using the Affymetrix GeneChip10K 2.0 Array. Parametric linkage analysis gave a single LOD score peak of 3.9 identifying linkage to chromosome 11q13. Haplotype analysis revealed three obligatory recombination events defining a 4.8 Mb linked interval between D11S1889 and SNP rs2077955. Higher resolution mapping and Southern blot analysis in each family identified overlapping hemizygous microdeletions. SNP expression analysis and real-time quantitative RT-PCR in patient lymphoblast cell lines excluded a positional effect on the flanking genes ORAOV1, PPFIA1 and CTTN. The smallest 43 kb deletion resulted in the loss of only one gene, FGF3, which was also deleted in all other otodental families. These data suggest that FGF3 haploinsufficiency is likely to be the cause of otodental syndrome. In addition, the Fas-associated death domain (FADD) gene was also deleted in the one family segregating ocular coloboma. Spatiotemporal in situ hybridization in zebrafish embryos established for the first time that fadd is expressed during eye development. We therefore propose that FADD haploinsufficiency is likely to be responsible for ocular coloboma in this family. This study therefore implicates FGF3 and FADD in human craniofacial disease. © The Author 2007. Published by Oxford University Press. All rights reserved.
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spelling SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular colobomaWe ascertained three different families affected with oto-dental syndrome, a rare but severe autosomal-dominant craniofacial anomaly. All affected patients had the unique phenotype of grossly enlarged molar teeth (globodontia) segregating with a high-frequency sensorineural hearing loss. In addition, ocular coloboma segregated with disease in one family (oculo-oto-dental syndrome). A genome-wide scan was performed using the Affymetrix GeneChip10K 2.0 Array. Parametric linkage analysis gave a single LOD score peak of 3.9 identifying linkage to chromosome 11q13. Haplotype analysis revealed three obligatory recombination events defining a 4.8 Mb linked interval between D11S1889 and SNP rs2077955. Higher resolution mapping and Southern blot analysis in each family identified overlapping hemizygous microdeletions. SNP expression analysis and real-time quantitative RT-PCR in patient lymphoblast cell lines excluded a positional effect on the flanking genes ORAOV1, PPFIA1 and CTTN. The smallest 43 kb deletion resulted in the loss of only one gene, FGF3, which was also deleted in all other otodental families. These data suggest that FGF3 haploinsufficiency is likely to be the cause of otodental syndrome. In addition, the Fas-associated death domain (FADD) gene was also deleted in the one family segregating ocular coloboma. Spatiotemporal in situ hybridization in zebrafish embryos established for the first time that fadd is expressed during eye development. We therefore propose that FADD haploinsufficiency is likely to be responsible for ocular coloboma in this family. This study therefore implicates FGF3 and FADD in human craniofacial disease. © The Author 2007. Published by Oxford University Press. All rights reserved.Department of Clinical Neuroscience Imperial College London, St Dunstan's Road, London W6 8RPCSC-IC Microarray Centre/Genome Centre Imperial College London, St Dunstan's Road, London W6 8RPNHLI Imperial College London, St Dunstan's Road, London SW7 2AZFaculte de Chirgurgie Dentaire Universite Louis Pasteur, Strasbourg F-67000Max Delbrück Center for Molecular Medicine, D-13092 BerlinDepartment of Paediatric Dentistry Araraquara Dental School University of São Paulo State, São Paulo 14801-903Department of Oral and Maxillofacial Surgery Free University of Brussels, 1050 ElseneImperial College LondonUniversite Louis PasteurMax Delbrück Center for Molecular MedicineUniversidade de São Paulo (USP)Free University of BrusselsGregory-Evans, Cheryl Y.Moosajee, MariyaHodges, Matthew D.Mackay, Donna S.Game, LaurenceVargesson, NeilBloch-Zupan, AgnèsRüschendorf, FranzSantos-Pinto, LourdesWackens, GeorgesGregory-Evans, Kevin2022-04-29T08:43:21Z2022-04-29T08:43:21Z2007-10-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article2482-2493http://dx.doi.org/10.1093/hmg/ddm204Human Molecular Genetics, v. 16, n. 20, p. 2482-2493, 2007.0964-69061460-2083http://hdl.handle.net/11449/23104710.1093/hmg/ddm2042-s2.0-34848817416Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengHuman Molecular Geneticsinfo:eu-repo/semantics/openAccess2022-04-29T08:43:21Zoai:repositorio.unesp.br:11449/231047Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462022-04-29T08:43:21Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
title SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
spellingShingle SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
Gregory-Evans, Cheryl Y.
title_short SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
title_full SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
title_fullStr SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
title_full_unstemmed SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
title_sort SNP genome scanning localizes oto-dental syndrome to chromosome 11q13 and microdeletions at this locus implicate FGF3 in dental and inner-ear disease and FADD in ocular coloboma
author Gregory-Evans, Cheryl Y.
author_facet Gregory-Evans, Cheryl Y.
Moosajee, Mariya
Hodges, Matthew D.
Mackay, Donna S.
Game, Laurence
Vargesson, Neil
Bloch-Zupan, Agnès
Rüschendorf, Franz
Santos-Pinto, Lourdes
Wackens, Georges
Gregory-Evans, Kevin
author_role author
author2 Moosajee, Mariya
Hodges, Matthew D.
Mackay, Donna S.
Game, Laurence
Vargesson, Neil
Bloch-Zupan, Agnès
Rüschendorf, Franz
Santos-Pinto, Lourdes
Wackens, Georges
Gregory-Evans, Kevin
author2_role author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Imperial College London
Universite Louis Pasteur
Max Delbrück Center for Molecular Medicine
Universidade de São Paulo (USP)
Free University of Brussels
dc.contributor.author.fl_str_mv Gregory-Evans, Cheryl Y.
Moosajee, Mariya
Hodges, Matthew D.
Mackay, Donna S.
Game, Laurence
Vargesson, Neil
Bloch-Zupan, Agnès
Rüschendorf, Franz
Santos-Pinto, Lourdes
Wackens, Georges
Gregory-Evans, Kevin
description We ascertained three different families affected with oto-dental syndrome, a rare but severe autosomal-dominant craniofacial anomaly. All affected patients had the unique phenotype of grossly enlarged molar teeth (globodontia) segregating with a high-frequency sensorineural hearing loss. In addition, ocular coloboma segregated with disease in one family (oculo-oto-dental syndrome). A genome-wide scan was performed using the Affymetrix GeneChip10K 2.0 Array. Parametric linkage analysis gave a single LOD score peak of 3.9 identifying linkage to chromosome 11q13. Haplotype analysis revealed three obligatory recombination events defining a 4.8 Mb linked interval between D11S1889 and SNP rs2077955. Higher resolution mapping and Southern blot analysis in each family identified overlapping hemizygous microdeletions. SNP expression analysis and real-time quantitative RT-PCR in patient lymphoblast cell lines excluded a positional effect on the flanking genes ORAOV1, PPFIA1 and CTTN. The smallest 43 kb deletion resulted in the loss of only one gene, FGF3, which was also deleted in all other otodental families. These data suggest that FGF3 haploinsufficiency is likely to be the cause of otodental syndrome. In addition, the Fas-associated death domain (FADD) gene was also deleted in the one family segregating ocular coloboma. Spatiotemporal in situ hybridization in zebrafish embryos established for the first time that fadd is expressed during eye development. We therefore propose that FADD haploinsufficiency is likely to be responsible for ocular coloboma in this family. This study therefore implicates FGF3 and FADD in human craniofacial disease. © The Author 2007. Published by Oxford University Press. All rights reserved.
publishDate 2007
dc.date.none.fl_str_mv 2007-10-15
2022-04-29T08:43:21Z
2022-04-29T08:43:21Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1093/hmg/ddm204
Human Molecular Genetics, v. 16, n. 20, p. 2482-2493, 2007.
0964-6906
1460-2083
http://hdl.handle.net/11449/231047
10.1093/hmg/ddm204
2-s2.0-34848817416
url http://dx.doi.org/10.1093/hmg/ddm204
http://hdl.handle.net/11449/231047
identifier_str_mv Human Molecular Genetics, v. 16, n. 20, p. 2482-2493, 2007.
0964-6906
1460-2083
10.1093/hmg/ddm204
2-s2.0-34848817416
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Human Molecular Genetics
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 2482-2493
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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