Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus

Detalhes bibliográficos
Autor(a) principal: Corbi, Sâmia Cruz Tfaile [UNESP]
Data de Publicação: 2017
Outros Autores: Bastos, Alliny Souza [UNESP], Nepomuceno, Rafael [UNESP], Cirelli, Thamiris [UNESP], Santos, Raquel Alves Dos, Takahashi, Catarina Satie, Rocha, Cristiane S., Orrico, Silvana Regina Perez [UNESP], Maurer-Morelli, Claudia V., Scarel-Caminaga, Raquel Mantuaneli [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1155/2017/2180819
http://hdl.handle.net/11449/179098
Resumo: Despite increasing research in type 2 diabetes mellitus (T2D), there are few studies showing the impact of the poor glycemic control on biological processes occurring in T2D. In order to identify potential genes related to poorly/well-controlled patients with T2D, our strategy of investigation included a primary screen by microarray (Human Genome U133) in a small group of individuals followed by an independent validation in a greater group using RT-qPCR. Ninety patients were divided as follows: poorly controlled T2D (G1), well-controlled T2D (G2), and normoglycemic individuals (G3). After using affy package in R, differentially expressed genes (DEGs) were prospected as candidate genes potentially relevant for the glycemic control in T2D patients. After validation by RT-qPCR, the obtained DEGs were as follows - G1 + G2 versus G3: HLA-DQA1, SOS1, and BRCA2; G2 versus G1: ENO2, VAMP2, CCND3, CEBPD, LGALS12, AGBL5, MAP2K5, and PPAP2B; G2 versus G3: HLA-DQB1, MCM4, and SEC13; and G1 versus G3: PPIC. This demonstrated a systemic exacerbation of the gene expression related to immune response in T2D patients. Moreover, genes related to lipid metabolisms and DNA replication/repair were influenced by the glycemic control. In conclusion, this study pointed out candidate genes potentially associated with adequate glycemic control in T2D patients, contributing to the knowledge of how the glycemic control could systemically influence gene expression.
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spelling Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitusDespite increasing research in type 2 diabetes mellitus (T2D), there are few studies showing the impact of the poor glycemic control on biological processes occurring in T2D. In order to identify potential genes related to poorly/well-controlled patients with T2D, our strategy of investigation included a primary screen by microarray (Human Genome U133) in a small group of individuals followed by an independent validation in a greater group using RT-qPCR. Ninety patients were divided as follows: poorly controlled T2D (G1), well-controlled T2D (G2), and normoglycemic individuals (G3). After using affy package in R, differentially expressed genes (DEGs) were prospected as candidate genes potentially relevant for the glycemic control in T2D patients. After validation by RT-qPCR, the obtained DEGs were as follows - G1 + G2 versus G3: HLA-DQA1, SOS1, and BRCA2; G2 versus G1: ENO2, VAMP2, CCND3, CEBPD, LGALS12, AGBL5, MAP2K5, and PPAP2B; G2 versus G3: HLA-DQB1, MCM4, and SEC13; and G1 versus G3: PPIC. This demonstrated a systemic exacerbation of the gene expression related to immune response in T2D patients. Moreover, genes related to lipid metabolisms and DNA replication/repair were influenced by the glycemic control. In conclusion, this study pointed out candidate genes potentially associated with adequate glycemic control in T2D patients, contributing to the knowledge of how the glycemic control could systemically influence gene expression.Department of Diagnosis and Surgery School of Dentistry Universidade Estadual Paulista (UNESP)Department of Morphology School of Dentistry Universidade Estadual Paulista (UNESP)Postgraduate Program in Sciences of the University of FrancaDepartment of Genetics Faculty of Medicine of Ribeirão Preto and Department of Biology FFCLRP University of São Paulo (USP)Department of Medical Genetics University of Campinas (UNICAMP)Department of Diagnosis and Surgery School of Dentistry Universidade Estadual Paulista (UNESP)Department of Morphology School of Dentistry Universidade Estadual Paulista (UNESP)Universidade Estadual Paulista (Unesp)Postgraduate Program in Sciences of the University of FrancaUniversidade de São Paulo (USP)Universidade Estadual de Campinas (UNICAMP)Corbi, Sâmia Cruz Tfaile [UNESP]Bastos, Alliny Souza [UNESP]Nepomuceno, Rafael [UNESP]Cirelli, Thamiris [UNESP]Santos, Raquel Alves DosTakahashi, Catarina SatieRocha, Cristiane S.Orrico, Silvana Regina Perez [UNESP]Maurer-Morelli, Claudia V.Scarel-Caminaga, Raquel Mantuaneli [UNESP]2018-12-11T17:33:42Z2018-12-11T17:33:42Z2017-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleapplication/pdfhttp://dx.doi.org/10.1155/2017/2180819Journal of Diabetes Research, v. 2017.2314-67532314-6745http://hdl.handle.net/11449/17909810.1155/2017/21808192-s2.0-850273003062-s2.0-85027300306.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Diabetes Research1,1161,116info:eu-repo/semantics/openAccess2023-11-27T06:17:06Zoai:repositorio.unesp.br:11449/179098Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-11-27T06:17:06Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
title Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
spellingShingle Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
Corbi, Sâmia Cruz Tfaile [UNESP]
title_short Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
title_full Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
title_fullStr Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
title_full_unstemmed Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
title_sort Expression profile of genes potentially associated with adequate glycemic control in patients with type 2 diabetes mellitus
author Corbi, Sâmia Cruz Tfaile [UNESP]
author_facet Corbi, Sâmia Cruz Tfaile [UNESP]
Bastos, Alliny Souza [UNESP]
Nepomuceno, Rafael [UNESP]
Cirelli, Thamiris [UNESP]
Santos, Raquel Alves Dos
Takahashi, Catarina Satie
Rocha, Cristiane S.
Orrico, Silvana Regina Perez [UNESP]
Maurer-Morelli, Claudia V.
Scarel-Caminaga, Raquel Mantuaneli [UNESP]
author_role author
author2 Bastos, Alliny Souza [UNESP]
Nepomuceno, Rafael [UNESP]
Cirelli, Thamiris [UNESP]
Santos, Raquel Alves Dos
Takahashi, Catarina Satie
Rocha, Cristiane S.
Orrico, Silvana Regina Perez [UNESP]
Maurer-Morelli, Claudia V.
Scarel-Caminaga, Raquel Mantuaneli [UNESP]
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Postgraduate Program in Sciences of the University of Franca
Universidade de São Paulo (USP)
Universidade Estadual de Campinas (UNICAMP)
dc.contributor.author.fl_str_mv Corbi, Sâmia Cruz Tfaile [UNESP]
Bastos, Alliny Souza [UNESP]
Nepomuceno, Rafael [UNESP]
Cirelli, Thamiris [UNESP]
Santos, Raquel Alves Dos
Takahashi, Catarina Satie
Rocha, Cristiane S.
Orrico, Silvana Regina Perez [UNESP]
Maurer-Morelli, Claudia V.
Scarel-Caminaga, Raquel Mantuaneli [UNESP]
description Despite increasing research in type 2 diabetes mellitus (T2D), there are few studies showing the impact of the poor glycemic control on biological processes occurring in T2D. In order to identify potential genes related to poorly/well-controlled patients with T2D, our strategy of investigation included a primary screen by microarray (Human Genome U133) in a small group of individuals followed by an independent validation in a greater group using RT-qPCR. Ninety patients were divided as follows: poorly controlled T2D (G1), well-controlled T2D (G2), and normoglycemic individuals (G3). After using affy package in R, differentially expressed genes (DEGs) were prospected as candidate genes potentially relevant for the glycemic control in T2D patients. After validation by RT-qPCR, the obtained DEGs were as follows - G1 + G2 versus G3: HLA-DQA1, SOS1, and BRCA2; G2 versus G1: ENO2, VAMP2, CCND3, CEBPD, LGALS12, AGBL5, MAP2K5, and PPAP2B; G2 versus G3: HLA-DQB1, MCM4, and SEC13; and G1 versus G3: PPIC. This demonstrated a systemic exacerbation of the gene expression related to immune response in T2D patients. Moreover, genes related to lipid metabolisms and DNA replication/repair were influenced by the glycemic control. In conclusion, this study pointed out candidate genes potentially associated with adequate glycemic control in T2D patients, contributing to the knowledge of how the glycemic control could systemically influence gene expression.
publishDate 2017
dc.date.none.fl_str_mv 2017-01-01
2018-12-11T17:33:42Z
2018-12-11T17:33:42Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1155/2017/2180819
Journal of Diabetes Research, v. 2017.
2314-6753
2314-6745
http://hdl.handle.net/11449/179098
10.1155/2017/2180819
2-s2.0-85027300306
2-s2.0-85027300306.pdf
url http://dx.doi.org/10.1155/2017/2180819
http://hdl.handle.net/11449/179098
identifier_str_mv Journal of Diabetes Research, v. 2017.
2314-6753
2314-6745
10.1155/2017/2180819
2-s2.0-85027300306
2-s2.0-85027300306.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Diabetes Research
1,116
1,116
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
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instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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