Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis

Detalhes bibliográficos
Autor(a) principal: Hahn, Leandro
Data de Publicação: 2022
Outros Autores: Parent, Léon-Étienne, Feltrim, Anderson Luiz, Rozane, Danilo Eduardo [UNESP], Ender, Marcos Matos, Tassinari, Adriele, Krug, Amanda Veridiana, Berghetti, Álvaro Luís Pasquetti, Brunetto, Gustavo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/agronomy12112714
http://hdl.handle.net/11449/246299
Resumo: The low productivity of garlic in Brazil requires more efficient nutritional management. For this, environmental and fertilization-related factors must be adjusted to a set of local conditions. Our objective was to provide an accurate diagnosis of the nutrient status of garlic crops in southern Brazil. The dataset comprised 1024 observations, 962 as field tests conducted during the 2015–2017 period to train the model, and 61 field observations collected during the 2018–2019 period to validate the model. Machine learning models (MLM) related garlic yield to managerial, edaphic, plant, and climatic features. Compositional data analysis (CoDa) methods allowed classification of nutrients in the order of limitation to yield where MLM detected nutrient imbalance. Tissue analysis alone returned an accuracy of 0.750 in regression and 0.891 in classification about the yield cutoff of 11 ton ha−1. Adding all features documented in the dataset, accuracy reached 0.855 in regression and 0.912 in classification. Local diagnosis based on MLM and CoDa and accounting for local features differed from regional diagnosis across features. Local nutrient diagnosis may differ from regional diagnosis because several yield-impacting factors are taken into account and benchmark compositions are representative of local conditions.
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spelling Local Factors Impact Accuracy of Garlic Tissue Test DiagnosisAdaboostAllium sativumcompositional distancegrowth-limiting factorsmachine learningperturbation vectorrandom forestThe low productivity of garlic in Brazil requires more efficient nutritional management. For this, environmental and fertilization-related factors must be adjusted to a set of local conditions. Our objective was to provide an accurate diagnosis of the nutrient status of garlic crops in southern Brazil. The dataset comprised 1024 observations, 962 as field tests conducted during the 2015–2017 period to train the model, and 61 field observations collected during the 2018–2019 period to validate the model. Machine learning models (MLM) related garlic yield to managerial, edaphic, plant, and climatic features. Compositional data analysis (CoDa) methods allowed classification of nutrients in the order of limitation to yield where MLM detected nutrient imbalance. Tissue analysis alone returned an accuracy of 0.750 in regression and 0.891 in classification about the yield cutoff of 11 ton ha−1. Adding all features documented in the dataset, accuracy reached 0.855 in regression and 0.912 in classification. Local diagnosis based on MLM and CoDa and accounting for local features differed from regional diagnosis across features. Local nutrient diagnosis may differ from regional diagnosis because several yield-impacting factors are taken into account and benchmark compositions are representative of local conditions.Canadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of CanadaNatural Sciences and Engineering Research Council of CanadaCaçador Experimental Station Santa Catarina State Agricultural Research and Rural Extension Agency (EPAGRI), SCDepartment of Soils and Agrifood Engineering Université LavalAgronomy Department São Paulo State University “Júlio Mesquita Filho”, SPAgronomy Department University of Alto Vale do Rio do Peixe (UNIARP), SCSoil Science Department Federal University of Santa Maria (UFSM), RSForest Science Department Federal University of Paraná (UFPR), RSAgronomy Department São Paulo State University “Júlio Mesquita Filho”, SPCanadian Network for Research and Innovation in Machining Technology, Natural Sciences and Engineering Research Council of Canada: NSERC-2254Natural Sciences and Engineering Research Council of Canada: NSERC-2254(EPAGRI)Université LavalUniversidade Estadual Paulista (UNESP)University of Alto Vale do Rio do Peixe (UNIARP)Universidade Federal de Sergipe (UFS)Universidade Federal do Paraná (UFPR)Hahn, LeandroParent, Léon-ÉtienneFeltrim, Anderson LuizRozane, Danilo Eduardo [UNESP]Ender, Marcos MatosTassinari, AdrieleKrug, Amanda VeridianaBerghetti, Álvaro Luís PasquettiBrunetto, Gustavo2023-07-29T12:37:12Z2023-07-29T12:37:12Z2022-11-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/agronomy12112714Agronomy, v. 12, n. 11, 2022.2073-4395http://hdl.handle.net/11449/24629910.3390/agronomy121127142-s2.0-85141887663Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengAgronomyinfo:eu-repo/semantics/openAccess2023-07-29T12:37:12Zoai:repositorio.unesp.br:11449/246299Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-07-29T12:37:12Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
title Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
spellingShingle Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
Hahn, Leandro
Adaboost
Allium sativum
compositional distance
growth-limiting factors
machine learning
perturbation vector
random forest
title_short Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
title_full Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
title_fullStr Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
title_full_unstemmed Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
title_sort Local Factors Impact Accuracy of Garlic Tissue Test Diagnosis
author Hahn, Leandro
author_facet Hahn, Leandro
Parent, Léon-Étienne
Feltrim, Anderson Luiz
Rozane, Danilo Eduardo [UNESP]
Ender, Marcos Matos
Tassinari, Adriele
Krug, Amanda Veridiana
Berghetti, Álvaro Luís Pasquetti
Brunetto, Gustavo
author_role author
author2 Parent, Léon-Étienne
Feltrim, Anderson Luiz
Rozane, Danilo Eduardo [UNESP]
Ender, Marcos Matos
Tassinari, Adriele
Krug, Amanda Veridiana
Berghetti, Álvaro Luís Pasquetti
Brunetto, Gustavo
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv (EPAGRI)
Université Laval
Universidade Estadual Paulista (UNESP)
University of Alto Vale do Rio do Peixe (UNIARP)
Universidade Federal de Sergipe (UFS)
Universidade Federal do Paraná (UFPR)
dc.contributor.author.fl_str_mv Hahn, Leandro
Parent, Léon-Étienne
Feltrim, Anderson Luiz
Rozane, Danilo Eduardo [UNESP]
Ender, Marcos Matos
Tassinari, Adriele
Krug, Amanda Veridiana
Berghetti, Álvaro Luís Pasquetti
Brunetto, Gustavo
dc.subject.por.fl_str_mv Adaboost
Allium sativum
compositional distance
growth-limiting factors
machine learning
perturbation vector
random forest
topic Adaboost
Allium sativum
compositional distance
growth-limiting factors
machine learning
perturbation vector
random forest
description The low productivity of garlic in Brazil requires more efficient nutritional management. For this, environmental and fertilization-related factors must be adjusted to a set of local conditions. Our objective was to provide an accurate diagnosis of the nutrient status of garlic crops in southern Brazil. The dataset comprised 1024 observations, 962 as field tests conducted during the 2015–2017 period to train the model, and 61 field observations collected during the 2018–2019 period to validate the model. Machine learning models (MLM) related garlic yield to managerial, edaphic, plant, and climatic features. Compositional data analysis (CoDa) methods allowed classification of nutrients in the order of limitation to yield where MLM detected nutrient imbalance. Tissue analysis alone returned an accuracy of 0.750 in regression and 0.891 in classification about the yield cutoff of 11 ton ha−1. Adding all features documented in the dataset, accuracy reached 0.855 in regression and 0.912 in classification. Local diagnosis based on MLM and CoDa and accounting for local features differed from regional diagnosis across features. Local nutrient diagnosis may differ from regional diagnosis because several yield-impacting factors are taken into account and benchmark compositions are representative of local conditions.
publishDate 2022
dc.date.none.fl_str_mv 2022-11-01
2023-07-29T12:37:12Z
2023-07-29T12:37:12Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/agronomy12112714
Agronomy, v. 12, n. 11, 2022.
2073-4395
http://hdl.handle.net/11449/246299
10.3390/agronomy12112714
2-s2.0-85141887663
url http://dx.doi.org/10.3390/agronomy12112714
http://hdl.handle.net/11449/246299
identifier_str_mv Agronomy, v. 12, n. 11, 2022.
2073-4395
10.3390/agronomy12112714
2-s2.0-85141887663
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Agronomy
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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