Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1007/s40415-020-00586-8 http://hdl.handle.net/11449/196638 |
Resumo: | In this study, we developed and characterized microsatellite for Aspidosperma pyrifolium Mart. & Zucc., considered a species complex due to its morphological variation and disjunct distribution. This complex is predominant in the Caatinga of Northeast Brazil, but also occurs in semi-deciduous seasonal forests of central Brazil, in Chaco areas of the southwestern Brazil, Bolivia and Paraguay. These vegetations are included in the concept of Seasonally Dry Tropical Forests (SDTFs). SDTFs are considered one of the most endangered forests in the world due to intense anthropic pressure and high endemism. Concerning endemic species of SDTFs, little is known about the genetic structure of A. pyrifolium and the effects of disjunct distribution on their gene flow and genetic diversity. In this study, 16 polymorphic and four monomorphic microsatellites were characterized in 82 Aspidosperma pyrifolium individuals from three populations in Brazil's Northeast. The transferability resulted in an average of seven markers, amplified in 11 other species of the genus (A. brasiliense A.S.S. Pereira & A.C.D. Castello, A. illustre (Vell.) Kuhlm. & Piraja, A. inundatum Ducke, A. multiflorum A.DC., A. nobile Mull.Arg., A. polyneuron Mull.Arg., A. quebracho-blanco Schltdl., A. ramiflorum Mull.Arg., A. rigidum Rusby, A. schultesii Woodson and A. subincanum Mart.). These markers can be used to estimate genetic parameters and help us to better understand the boundaries within A. pyrifolium complex. Their use can also be extended for conservation purposes of A. pyrifolium populations and consequently of SDTFs. Moreover, they may be applied in studies concerning other species of the genus. |
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Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical ForestsAspidosperma pyrifoliumCaatingaChacoSDTFSSRIn this study, we developed and characterized microsatellite for Aspidosperma pyrifolium Mart. & Zucc., considered a species complex due to its morphological variation and disjunct distribution. This complex is predominant in the Caatinga of Northeast Brazil, but also occurs in semi-deciduous seasonal forests of central Brazil, in Chaco areas of the southwestern Brazil, Bolivia and Paraguay. These vegetations are included in the concept of Seasonally Dry Tropical Forests (SDTFs). SDTFs are considered one of the most endangered forests in the world due to intense anthropic pressure and high endemism. Concerning endemic species of SDTFs, little is known about the genetic structure of A. pyrifolium and the effects of disjunct distribution on their gene flow and genetic diversity. In this study, 16 polymorphic and four monomorphic microsatellites were characterized in 82 Aspidosperma pyrifolium individuals from three populations in Brazil's Northeast. The transferability resulted in an average of seven markers, amplified in 11 other species of the genus (A. brasiliense A.S.S. Pereira & A.C.D. Castello, A. illustre (Vell.) Kuhlm. & Piraja, A. inundatum Ducke, A. multiflorum A.DC., A. nobile Mull.Arg., A. polyneuron Mull.Arg., A. quebracho-blanco Schltdl., A. ramiflorum Mull.Arg., A. rigidum Rusby, A. schultesii Woodson and A. subincanum Mart.). These markers can be used to estimate genetic parameters and help us to better understand the boundaries within A. pyrifolium complex. Their use can also be extended for conservation purposes of A. pyrifolium populations and consequently of SDTFs. Moreover, they may be applied in studies concerning other species of the genus.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Support Fund for Teaching, Research and Extension (FAEPEX)Univ State Sao Paulo Julio de Mesquita Filho, Postgrad Program Biol Sci Bot, Dept Bot, Inst Biosci, BR-18618689 Botucatu, SP, BrazilUniv Estadual Campinas, Dept Plant Biol, Inst Biol, BR-13083862 Campinas, SP, BrazilUniv State Sao Paulo Julio de Mesquita Filho, Postgrad Program Biol Sci Bot, Dept Bot, Inst Biosci, BR-18618689 Botucatu, SP, BrazilSupport Fund for Teaching, Research and Extension (FAEPEX): 519.292Soc Botanica Sao PauloUniversidade Estadual Paulista (Unesp)Universidade Estadual de Campinas (UNICAMP)Messias, Patricia Aparecida [UNESP]Alves, Fabio MatosPinheiro, FabioDe Souza, Anete PereiraKoch, Ingrid2020-12-10T19:51:25Z2020-12-10T19:51:25Z2020-03-02info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article139-145http://dx.doi.org/10.1007/s40415-020-00586-8Brazilian Journal Of Botany. Sao Paulo: Soc Botanica Sao Paulo, v. 43, n. 1, p. 139-145, 2020.0100-8404http://hdl.handle.net/11449/19663810.1007/s40415-020-00586-8WOS:000517695900003Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Journal Of Botanyinfo:eu-repo/semantics/openAccess2021-10-23T08:53:43Zoai:repositorio.unesp.br:11449/196638Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:51:50.449422Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests |
title |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests |
spellingShingle |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests Messias, Patricia Aparecida [UNESP] Aspidosperma pyrifolium Caatinga Chaco SDTF SSR |
title_short |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests |
title_full |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests |
title_fullStr |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests |
title_full_unstemmed |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests |
title_sort |
Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests |
author |
Messias, Patricia Aparecida [UNESP] |
author_facet |
Messias, Patricia Aparecida [UNESP] Alves, Fabio Matos Pinheiro, Fabio De Souza, Anete Pereira Koch, Ingrid |
author_role |
author |
author2 |
Alves, Fabio Matos Pinheiro, Fabio De Souza, Anete Pereira Koch, Ingrid |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Estadual de Campinas (UNICAMP) |
dc.contributor.author.fl_str_mv |
Messias, Patricia Aparecida [UNESP] Alves, Fabio Matos Pinheiro, Fabio De Souza, Anete Pereira Koch, Ingrid |
dc.subject.por.fl_str_mv |
Aspidosperma pyrifolium Caatinga Chaco SDTF SSR |
topic |
Aspidosperma pyrifolium Caatinga Chaco SDTF SSR |
description |
In this study, we developed and characterized microsatellite for Aspidosperma pyrifolium Mart. & Zucc., considered a species complex due to its morphological variation and disjunct distribution. This complex is predominant in the Caatinga of Northeast Brazil, but also occurs in semi-deciduous seasonal forests of central Brazil, in Chaco areas of the southwestern Brazil, Bolivia and Paraguay. These vegetations are included in the concept of Seasonally Dry Tropical Forests (SDTFs). SDTFs are considered one of the most endangered forests in the world due to intense anthropic pressure and high endemism. Concerning endemic species of SDTFs, little is known about the genetic structure of A. pyrifolium and the effects of disjunct distribution on their gene flow and genetic diversity. In this study, 16 polymorphic and four monomorphic microsatellites were characterized in 82 Aspidosperma pyrifolium individuals from three populations in Brazil's Northeast. The transferability resulted in an average of seven markers, amplified in 11 other species of the genus (A. brasiliense A.S.S. Pereira & A.C.D. Castello, A. illustre (Vell.) Kuhlm. & Piraja, A. inundatum Ducke, A. multiflorum A.DC., A. nobile Mull.Arg., A. polyneuron Mull.Arg., A. quebracho-blanco Schltdl., A. ramiflorum Mull.Arg., A. rigidum Rusby, A. schultesii Woodson and A. subincanum Mart.). These markers can be used to estimate genetic parameters and help us to better understand the boundaries within A. pyrifolium complex. Their use can also be extended for conservation purposes of A. pyrifolium populations and consequently of SDTFs. Moreover, they may be applied in studies concerning other species of the genus. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-10T19:51:25Z 2020-12-10T19:51:25Z 2020-03-02 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s40415-020-00586-8 Brazilian Journal Of Botany. Sao Paulo: Soc Botanica Sao Paulo, v. 43, n. 1, p. 139-145, 2020. 0100-8404 http://hdl.handle.net/11449/196638 10.1007/s40415-020-00586-8 WOS:000517695900003 |
url |
http://dx.doi.org/10.1007/s40415-020-00586-8 http://hdl.handle.net/11449/196638 |
identifier_str_mv |
Brazilian Journal Of Botany. Sao Paulo: Soc Botanica Sao Paulo, v. 43, n. 1, p. 139-145, 2020. 0100-8404 10.1007/s40415-020-00586-8 WOS:000517695900003 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Brazilian Journal Of Botany |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
139-145 |
dc.publisher.none.fl_str_mv |
Soc Botanica Sao Paulo |
publisher.none.fl_str_mv |
Soc Botanica Sao Paulo |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
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1808129559386652672 |