Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests

Detalhes bibliográficos
Autor(a) principal: Messias, Patricia Aparecida [UNESP]
Data de Publicação: 2020
Outros Autores: Alves, Fabio Matos, Pinheiro, Fabio, De Souza, Anete Pereira, Koch, Ingrid
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1007/s40415-020-00586-8
http://hdl.handle.net/11449/196638
Resumo: In this study, we developed and characterized microsatellite for Aspidosperma pyrifolium Mart. & Zucc., considered a species complex due to its morphological variation and disjunct distribution. This complex is predominant in the Caatinga of Northeast Brazil, but also occurs in semi-deciduous seasonal forests of central Brazil, in Chaco areas of the southwestern Brazil, Bolivia and Paraguay. These vegetations are included in the concept of Seasonally Dry Tropical Forests (SDTFs). SDTFs are considered one of the most endangered forests in the world due to intense anthropic pressure and high endemism. Concerning endemic species of SDTFs, little is known about the genetic structure of A. pyrifolium and the effects of disjunct distribution on their gene flow and genetic diversity. In this study, 16 polymorphic and four monomorphic microsatellites were characterized in 82 Aspidosperma pyrifolium individuals from three populations in Brazil's Northeast. The transferability resulted in an average of seven markers, amplified in 11 other species of the genus (A. brasiliense A.S.S. Pereira & A.C.D. Castello, A. illustre (Vell.) Kuhlm. & Piraja, A. inundatum Ducke, A. multiflorum A.DC., A. nobile Mull.Arg., A. polyneuron Mull.Arg., A. quebracho-blanco Schltdl., A. ramiflorum Mull.Arg., A. rigidum Rusby, A. schultesii Woodson and A. subincanum Mart.). These markers can be used to estimate genetic parameters and help us to better understand the boundaries within A. pyrifolium complex. Their use can also be extended for conservation purposes of A. pyrifolium populations and consequently of SDTFs. Moreover, they may be applied in studies concerning other species of the genus.
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spelling Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical ForestsAspidosperma pyrifoliumCaatingaChacoSDTFSSRIn this study, we developed and characterized microsatellite for Aspidosperma pyrifolium Mart. & Zucc., considered a species complex due to its morphological variation and disjunct distribution. This complex is predominant in the Caatinga of Northeast Brazil, but also occurs in semi-deciduous seasonal forests of central Brazil, in Chaco areas of the southwestern Brazil, Bolivia and Paraguay. These vegetations are included in the concept of Seasonally Dry Tropical Forests (SDTFs). SDTFs are considered one of the most endangered forests in the world due to intense anthropic pressure and high endemism. Concerning endemic species of SDTFs, little is known about the genetic structure of A. pyrifolium and the effects of disjunct distribution on their gene flow and genetic diversity. In this study, 16 polymorphic and four monomorphic microsatellites were characterized in 82 Aspidosperma pyrifolium individuals from three populations in Brazil's Northeast. The transferability resulted in an average of seven markers, amplified in 11 other species of the genus (A. brasiliense A.S.S. Pereira & A.C.D. Castello, A. illustre (Vell.) Kuhlm. & Piraja, A. inundatum Ducke, A. multiflorum A.DC., A. nobile Mull.Arg., A. polyneuron Mull.Arg., A. quebracho-blanco Schltdl., A. ramiflorum Mull.Arg., A. rigidum Rusby, A. schultesii Woodson and A. subincanum Mart.). These markers can be used to estimate genetic parameters and help us to better understand the boundaries within A. pyrifolium complex. Their use can also be extended for conservation purposes of A. pyrifolium populations and consequently of SDTFs. Moreover, they may be applied in studies concerning other species of the genus.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Support Fund for Teaching, Research and Extension (FAEPEX)Univ State Sao Paulo Julio de Mesquita Filho, Postgrad Program Biol Sci Bot, Dept Bot, Inst Biosci, BR-18618689 Botucatu, SP, BrazilUniv Estadual Campinas, Dept Plant Biol, Inst Biol, BR-13083862 Campinas, SP, BrazilUniv State Sao Paulo Julio de Mesquita Filho, Postgrad Program Biol Sci Bot, Dept Bot, Inst Biosci, BR-18618689 Botucatu, SP, BrazilSupport Fund for Teaching, Research and Extension (FAEPEX): 519.292Soc Botanica Sao PauloUniversidade Estadual Paulista (Unesp)Universidade Estadual de Campinas (UNICAMP)Messias, Patricia Aparecida [UNESP]Alves, Fabio MatosPinheiro, FabioDe Souza, Anete PereiraKoch, Ingrid2020-12-10T19:51:25Z2020-12-10T19:51:25Z2020-03-02info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article139-145http://dx.doi.org/10.1007/s40415-020-00586-8Brazilian Journal Of Botany. Sao Paulo: Soc Botanica Sao Paulo, v. 43, n. 1, p. 139-145, 2020.0100-8404http://hdl.handle.net/11449/19663810.1007/s40415-020-00586-8WOS:000517695900003Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Journal Of Botanyinfo:eu-repo/semantics/openAccess2021-10-23T08:53:43Zoai:repositorio.unesp.br:11449/196638Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:51:50.449422Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
title Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
spellingShingle Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
Messias, Patricia Aparecida [UNESP]
Aspidosperma pyrifolium
Caatinga
Chaco
SDTF
SSR
title_short Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
title_full Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
title_fullStr Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
title_full_unstemmed Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
title_sort Development and transferability of microsatellite markers for a complex of Aspidosperma Mart. & Zucc. (Apocynaceae) species from South American Seasonally Dry Tropical Forests
author Messias, Patricia Aparecida [UNESP]
author_facet Messias, Patricia Aparecida [UNESP]
Alves, Fabio Matos
Pinheiro, Fabio
De Souza, Anete Pereira
Koch, Ingrid
author_role author
author2 Alves, Fabio Matos
Pinheiro, Fabio
De Souza, Anete Pereira
Koch, Ingrid
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Estadual de Campinas (UNICAMP)
dc.contributor.author.fl_str_mv Messias, Patricia Aparecida [UNESP]
Alves, Fabio Matos
Pinheiro, Fabio
De Souza, Anete Pereira
Koch, Ingrid
dc.subject.por.fl_str_mv Aspidosperma pyrifolium
Caatinga
Chaco
SDTF
SSR
topic Aspidosperma pyrifolium
Caatinga
Chaco
SDTF
SSR
description In this study, we developed and characterized microsatellite for Aspidosperma pyrifolium Mart. & Zucc., considered a species complex due to its morphological variation and disjunct distribution. This complex is predominant in the Caatinga of Northeast Brazil, but also occurs in semi-deciduous seasonal forests of central Brazil, in Chaco areas of the southwestern Brazil, Bolivia and Paraguay. These vegetations are included in the concept of Seasonally Dry Tropical Forests (SDTFs). SDTFs are considered one of the most endangered forests in the world due to intense anthropic pressure and high endemism. Concerning endemic species of SDTFs, little is known about the genetic structure of A. pyrifolium and the effects of disjunct distribution on their gene flow and genetic diversity. In this study, 16 polymorphic and four monomorphic microsatellites were characterized in 82 Aspidosperma pyrifolium individuals from three populations in Brazil's Northeast. The transferability resulted in an average of seven markers, amplified in 11 other species of the genus (A. brasiliense A.S.S. Pereira & A.C.D. Castello, A. illustre (Vell.) Kuhlm. & Piraja, A. inundatum Ducke, A. multiflorum A.DC., A. nobile Mull.Arg., A. polyneuron Mull.Arg., A. quebracho-blanco Schltdl., A. ramiflorum Mull.Arg., A. rigidum Rusby, A. schultesii Woodson and A. subincanum Mart.). These markers can be used to estimate genetic parameters and help us to better understand the boundaries within A. pyrifolium complex. Their use can also be extended for conservation purposes of A. pyrifolium populations and consequently of SDTFs. Moreover, they may be applied in studies concerning other species of the genus.
publishDate 2020
dc.date.none.fl_str_mv 2020-12-10T19:51:25Z
2020-12-10T19:51:25Z
2020-03-02
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1007/s40415-020-00586-8
Brazilian Journal Of Botany. Sao Paulo: Soc Botanica Sao Paulo, v. 43, n. 1, p. 139-145, 2020.
0100-8404
http://hdl.handle.net/11449/196638
10.1007/s40415-020-00586-8
WOS:000517695900003
url http://dx.doi.org/10.1007/s40415-020-00586-8
http://hdl.handle.net/11449/196638
identifier_str_mv Brazilian Journal Of Botany. Sao Paulo: Soc Botanica Sao Paulo, v. 43, n. 1, p. 139-145, 2020.
0100-8404
10.1007/s40415-020-00586-8
WOS:000517695900003
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Brazilian Journal Of Botany
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 139-145
dc.publisher.none.fl_str_mv Soc Botanica Sao Paulo
publisher.none.fl_str_mv Soc Botanica Sao Paulo
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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