Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation

Detalhes bibliográficos
Autor(a) principal: Ochoa, Luz Eneida [UNESP]
Data de Publicação: 2015
Outros Autores: Pereira, Luiz Henrique G., Costa-Silva, Guilherme Jose [UNESP], Roxo, Fabio F. [UNESP], Batista, Jacqueline S., Formiga, Kyara, Foresti, Fausto [UNESP], Oliveira, Claudio [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://onlinelibrary.wiley.com/doi/10.1002/ece3.1486/full
http://hdl.handle.net/11449/128623
Resumo: Brachyplatystoma platynemum is a catfish species widely distributed in the Amazon basin. Despite being considered of little commercial interest, the decline in other fish populations has contributed to the increase in the catches of this species. The structure, population genetic variability, and evolutionary process that have driven the diversification of this species are presently unknown. Considering that, in order to better understand the genetic structure of this species, we analyzed individuals from seven locations of the Amazon basin using eight molecular markers: control region and cytochrome b mtDNA sequences, and a set of six nuclear microsatellite loci. The results show high levels of haplotype diversity and point to the occurrence of two structured populations (Amazon River and the Madeira River) with high values for F-ST. Divergence time estimates based on mtDNA indicated that these populations diverged about 1.0Mya (0.2-2.5Mya 95% HPD) using cytochrome b and 1.4Mya (0.2-2.7Mya 95% HPD) using control region. During that time, the influence of climate changes and hydrological events such as sea level oscillations and drainage isolation as a result of geological processes in the Pleistocene may have contributed to the current structure of B.platynemum populations, as well as of differences in water chemistry in Madeira River. The strong genetic structure and the time of genetic divergence estimated for the groups may indicate the existence of strong structure populations of B.platynemum in the Amazon basin.
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spelling Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservationBiodiversityclimate oscillationMadeira Rivermarine transgressionNeotropical fishesphylogeographyBrachyplatystoma platynemum is a catfish species widely distributed in the Amazon basin. Despite being considered of little commercial interest, the decline in other fish populations has contributed to the increase in the catches of this species. The structure, population genetic variability, and evolutionary process that have driven the diversification of this species are presently unknown. Considering that, in order to better understand the genetic structure of this species, we analyzed individuals from seven locations of the Amazon basin using eight molecular markers: control region and cytochrome b mtDNA sequences, and a set of six nuclear microsatellite loci. The results show high levels of haplotype diversity and point to the occurrence of two structured populations (Amazon River and the Madeira River) with high values for F-ST. Divergence time estimates based on mtDNA indicated that these populations diverged about 1.0Mya (0.2-2.5Mya 95% HPD) using cytochrome b and 1.4Mya (0.2-2.7Mya 95% HPD) using control region. During that time, the influence of climate changes and hydrological events such as sea level oscillations and drainage isolation as a result of geological processes in the Pleistocene may have contributed to the current structure of B.platynemum populations, as well as of differences in water chemistry in Madeira River. The strong genetic structure and the time of genetic divergence estimated for the groups may indicate the existence of strong structure populations of B.platynemum in the Amazon basin.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Santo Antonio Energia S/AFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Centro Interdisciplinar de Ciências da Vida, Universidade Federal da Integração Latino Americana, Foz do Iguaçu, BrazilLaboratório Temático de Biologia Molecular, Instituto Nacional de Pesquisa da Amazônia, Manaus, Brazil.Universidade Estadual Paulista, Departamento de Morfologia, Instituto de Biociências de Botucatu, São Paulo, Brazil.FAPESP: 2014/06853-8FAPESP: 2014/05051-5Wiley-BlackwellUniversidade Estadual Paulista (Unesp)Universidade Federal da Integração Latino Americana Integração Latino AmericanaNacional de Pesquisa da AmazôniaOchoa, Luz Eneida [UNESP]Pereira, Luiz Henrique G.Costa-Silva, Guilherme Jose [UNESP]Roxo, Fabio F. [UNESP]Batista, Jacqueline S.Formiga, KyaraForesti, Fausto [UNESP]Oliveira, Claudio [UNESP]2015-10-21T13:11:37Z2015-10-21T13:11:37Z2015-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article2005-2020application/pdfhttp://onlinelibrary.wiley.com/doi/10.1002/ece3.1486/fullEcology And Evolution. Hoboken: Wiley-blackwell, v. 5, n. 10, p. 2005-2020, 2015.2045-7758http://hdl.handle.net/11449/12862310.1002/ece3.1486WOS:000354812500007WOS000354812500007.pdf0804793944846367Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengEcology And Evolution2.3401,356info:eu-repo/semantics/openAccess2023-12-13T06:17:51Zoai:repositorio.unesp.br:11449/128623Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:13:13.146770Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
title Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
spellingShingle Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
Ochoa, Luz Eneida [UNESP]
Biodiversity
climate oscillation
Madeira River
marine transgression
Neotropical fishes
phylogeography
title_short Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
title_full Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
title_fullStr Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
title_full_unstemmed Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
title_sort Genetic structure and historical diversification of catfish Brachyplatystoma platynemum (Siluriformes: Pimelodidae) in the Amazon basin with implications for its conservation
author Ochoa, Luz Eneida [UNESP]
author_facet Ochoa, Luz Eneida [UNESP]
Pereira, Luiz Henrique G.
Costa-Silva, Guilherme Jose [UNESP]
Roxo, Fabio F. [UNESP]
Batista, Jacqueline S.
Formiga, Kyara
Foresti, Fausto [UNESP]
Oliveira, Claudio [UNESP]
author_role author
author2 Pereira, Luiz Henrique G.
Costa-Silva, Guilherme Jose [UNESP]
Roxo, Fabio F. [UNESP]
Batista, Jacqueline S.
Formiga, Kyara
Foresti, Fausto [UNESP]
Oliveira, Claudio [UNESP]
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Federal da Integração Latino Americana Integração Latino Americana
Nacional de Pesquisa da Amazônia
dc.contributor.author.fl_str_mv Ochoa, Luz Eneida [UNESP]
Pereira, Luiz Henrique G.
Costa-Silva, Guilherme Jose [UNESP]
Roxo, Fabio F. [UNESP]
Batista, Jacqueline S.
Formiga, Kyara
Foresti, Fausto [UNESP]
Oliveira, Claudio [UNESP]
dc.subject.por.fl_str_mv Biodiversity
climate oscillation
Madeira River
marine transgression
Neotropical fishes
phylogeography
topic Biodiversity
climate oscillation
Madeira River
marine transgression
Neotropical fishes
phylogeography
description Brachyplatystoma platynemum is a catfish species widely distributed in the Amazon basin. Despite being considered of little commercial interest, the decline in other fish populations has contributed to the increase in the catches of this species. The structure, population genetic variability, and evolutionary process that have driven the diversification of this species are presently unknown. Considering that, in order to better understand the genetic structure of this species, we analyzed individuals from seven locations of the Amazon basin using eight molecular markers: control region and cytochrome b mtDNA sequences, and a set of six nuclear microsatellite loci. The results show high levels of haplotype diversity and point to the occurrence of two structured populations (Amazon River and the Madeira River) with high values for F-ST. Divergence time estimates based on mtDNA indicated that these populations diverged about 1.0Mya (0.2-2.5Mya 95% HPD) using cytochrome b and 1.4Mya (0.2-2.7Mya 95% HPD) using control region. During that time, the influence of climate changes and hydrological events such as sea level oscillations and drainage isolation as a result of geological processes in the Pleistocene may have contributed to the current structure of B.platynemum populations, as well as of differences in water chemistry in Madeira River. The strong genetic structure and the time of genetic divergence estimated for the groups may indicate the existence of strong structure populations of B.platynemum in the Amazon basin.
publishDate 2015
dc.date.none.fl_str_mv 2015-10-21T13:11:37Z
2015-10-21T13:11:37Z
2015-05-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://onlinelibrary.wiley.com/doi/10.1002/ece3.1486/full
Ecology And Evolution. Hoboken: Wiley-blackwell, v. 5, n. 10, p. 2005-2020, 2015.
2045-7758
http://hdl.handle.net/11449/128623
10.1002/ece3.1486
WOS:000354812500007
WOS000354812500007.pdf
0804793944846367
url http://onlinelibrary.wiley.com/doi/10.1002/ece3.1486/full
http://hdl.handle.net/11449/128623
identifier_str_mv Ecology And Evolution. Hoboken: Wiley-blackwell, v. 5, n. 10, p. 2005-2020, 2015.
2045-7758
10.1002/ece3.1486
WOS:000354812500007
WOS000354812500007.pdf
0804793944846367
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Ecology And Evolution
2.340
1,356
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 2005-2020
application/pdf
dc.publisher.none.fl_str_mv Wiley-Blackwell
publisher.none.fl_str_mv Wiley-Blackwell
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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