Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1177/1040638716651466 http://hdl.handle.net/11449/165232 |
Resumo: | Salmonella enterica subsp. enterica serovar Gallinarum biovar Gallinarum (S. Gallinarum) and biovar Pullorum (S. Pullorum) are 2 poultry pathogens that cause major economic losses to the poultry industry worldwide. Control of both diseases mainly relies on the adoption of biosecurity programs, and success is dependent on accurate and fast detection. Based on this concept, we developed a duplex PCR assay, targeting 2 chromosomal sequences, which allowed us to precisely identify and differentiate S. Gallinarum and S. Pullorum field strains. This assay was validated by testing genomic DNA from 40 S. Gallinarum and 29 S. Pullorum field strains, 87 other Salmonella serovars, and 7 non-Salmonella strains. The serovar identifier region (SIR) primers produced a fragment only in S. Gallinarum and S. Pullorum strains, whereas the fragment from the ratA coding sequence, which was previously demonstrated to differentiate the 2 biovars, was also amplified from other Salmonella serovars. Our results showed that the combination of both SIR and ratA amplifications could be used to identify as well as to differentiate colonies of S. Gallinarum and S. Pullorum reliably. Thus, we believe this methodology can be a useful ancillary tool for routine veterinary diagnostic laboratories by providing rapid, accurate results. |
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Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assayDuplex PCRfowl typhoidpullorum diseaseSalmonella GallinarumSalmonella PullorumSalmonella enterica subsp. enterica serovar Gallinarum biovar Gallinarum (S. Gallinarum) and biovar Pullorum (S. Pullorum) are 2 poultry pathogens that cause major economic losses to the poultry industry worldwide. Control of both diseases mainly relies on the adoption of biosecurity programs, and success is dependent on accurate and fast detection. Based on this concept, we developed a duplex PCR assay, targeting 2 chromosomal sequences, which allowed us to precisely identify and differentiate S. Gallinarum and S. Pullorum field strains. This assay was validated by testing genomic DNA from 40 S. Gallinarum and 29 S. Pullorum field strains, 87 other Salmonella serovars, and 7 non-Salmonella strains. The serovar identifier region (SIR) primers produced a fragment only in S. Gallinarum and S. Pullorum strains, whereas the fragment from the ratA coding sequence, which was previously demonstrated to differentiate the 2 biovars, was also amplified from other Salmonella serovars. Our results showed that the combination of both SIR and ratA amplifications could be used to identify as well as to differentiate colonies of S. Gallinarum and S. Pullorum reliably. Thus, we believe this methodology can be a useful ancillary tool for routine veterinary diagnostic laboratories by providing rapid, accurate results.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Sao Paulo State Univ, Fac Agr & Vet Sci, Sao Paulo, BrazilUniv Fed Paraiba, Agron Sci Ctr, Campus 2, BR-58397000 Areia, Paraiba, BrazilUniv Nottingham, Sch Vet Med & Sci, Loughborough, Leics, EnglandSao Paulo State Univ, Fac Agr & Vet Sci, Sao Paulo, BrazilFAPESP: 2011/23483-1Sage Publications IncUniversidade Estadual Paulista (Unesp)Univ Fed ParaibaUniv NottinghamAlves Batista, Diego Felipe [UNESP]Freitas Neto, Oliveiro Caetano deAlmeida, Adriana Maria de [UNESP]Barrow, Paul AndrewBarbosa, Fernanda de Oliveira [UNESP]Berchieri Junior, Angelo [UNESP]2018-11-27T17:21:11Z2018-11-27T17:21:11Z2016-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article419-422application/pdfhttp://dx.doi.org/10.1177/1040638716651466Journal Of Veterinary Diagnostic Investigation. Thousand Oaks: Sage Publications Inc, v. 28, n. 4, p. 419-422, 2016.1040-6387http://hdl.handle.net/11449/16523210.1177/1040638716651466WOS:000379532600010WOS000379532600010.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal Of Veterinary Diagnostic Investigation0,621info:eu-repo/semantics/openAccess2024-06-07T13:03:07Zoai:repositorio.unesp.br:11449/165232Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:34:20.858183Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay |
title |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay |
spellingShingle |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay Alves Batista, Diego Felipe [UNESP] Duplex PCR fowl typhoid pullorum disease Salmonella Gallinarum Salmonella Pullorum |
title_short |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay |
title_full |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay |
title_fullStr |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay |
title_full_unstemmed |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay |
title_sort |
Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay |
author |
Alves Batista, Diego Felipe [UNESP] |
author_facet |
Alves Batista, Diego Felipe [UNESP] Freitas Neto, Oliveiro Caetano de Almeida, Adriana Maria de [UNESP] Barrow, Paul Andrew Barbosa, Fernanda de Oliveira [UNESP] Berchieri Junior, Angelo [UNESP] |
author_role |
author |
author2 |
Freitas Neto, Oliveiro Caetano de Almeida, Adriana Maria de [UNESP] Barrow, Paul Andrew Barbosa, Fernanda de Oliveira [UNESP] Berchieri Junior, Angelo [UNESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Univ Fed Paraiba Univ Nottingham |
dc.contributor.author.fl_str_mv |
Alves Batista, Diego Felipe [UNESP] Freitas Neto, Oliveiro Caetano de Almeida, Adriana Maria de [UNESP] Barrow, Paul Andrew Barbosa, Fernanda de Oliveira [UNESP] Berchieri Junior, Angelo [UNESP] |
dc.subject.por.fl_str_mv |
Duplex PCR fowl typhoid pullorum disease Salmonella Gallinarum Salmonella Pullorum |
topic |
Duplex PCR fowl typhoid pullorum disease Salmonella Gallinarum Salmonella Pullorum |
description |
Salmonella enterica subsp. enterica serovar Gallinarum biovar Gallinarum (S. Gallinarum) and biovar Pullorum (S. Pullorum) are 2 poultry pathogens that cause major economic losses to the poultry industry worldwide. Control of both diseases mainly relies on the adoption of biosecurity programs, and success is dependent on accurate and fast detection. Based on this concept, we developed a duplex PCR assay, targeting 2 chromosomal sequences, which allowed us to precisely identify and differentiate S. Gallinarum and S. Pullorum field strains. This assay was validated by testing genomic DNA from 40 S. Gallinarum and 29 S. Pullorum field strains, 87 other Salmonella serovars, and 7 non-Salmonella strains. The serovar identifier region (SIR) primers produced a fragment only in S. Gallinarum and S. Pullorum strains, whereas the fragment from the ratA coding sequence, which was previously demonstrated to differentiate the 2 biovars, was also amplified from other Salmonella serovars. Our results showed that the combination of both SIR and ratA amplifications could be used to identify as well as to differentiate colonies of S. Gallinarum and S. Pullorum reliably. Thus, we believe this methodology can be a useful ancillary tool for routine veterinary diagnostic laboratories by providing rapid, accurate results. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-07-01 2018-11-27T17:21:11Z 2018-11-27T17:21:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1177/1040638716651466 Journal Of Veterinary Diagnostic Investigation. Thousand Oaks: Sage Publications Inc, v. 28, n. 4, p. 419-422, 2016. 1040-6387 http://hdl.handle.net/11449/165232 10.1177/1040638716651466 WOS:000379532600010 WOS000379532600010.pdf |
url |
http://dx.doi.org/10.1177/1040638716651466 http://hdl.handle.net/11449/165232 |
identifier_str_mv |
Journal Of Veterinary Diagnostic Investigation. Thousand Oaks: Sage Publications Inc, v. 28, n. 4, p. 419-422, 2016. 1040-6387 10.1177/1040638716651466 WOS:000379532600010 WOS000379532600010.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal Of Veterinary Diagnostic Investigation 0,621 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
419-422 application/pdf |
dc.publisher.none.fl_str_mv |
Sage Publications Inc |
publisher.none.fl_str_mv |
Sage Publications Inc |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129438869618688 |