Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay

Detalhes bibliográficos
Autor(a) principal: Alves Batista, Diego Felipe [UNESP]
Data de Publicação: 2016
Outros Autores: Freitas Neto, Oliveiro Caetano de, Almeida, Adriana Maria de [UNESP], Barrow, Paul Andrew, Barbosa, Fernanda de Oliveira [UNESP], Berchieri Junior, Angelo [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1177/1040638716651466
http://hdl.handle.net/11449/165232
Resumo: Salmonella enterica subsp. enterica serovar Gallinarum biovar Gallinarum (S. Gallinarum) and biovar Pullorum (S. Pullorum) are 2 poultry pathogens that cause major economic losses to the poultry industry worldwide. Control of both diseases mainly relies on the adoption of biosecurity programs, and success is dependent on accurate and fast detection. Based on this concept, we developed a duplex PCR assay, targeting 2 chromosomal sequences, which allowed us to precisely identify and differentiate S. Gallinarum and S. Pullorum field strains. This assay was validated by testing genomic DNA from 40 S. Gallinarum and 29 S. Pullorum field strains, 87 other Salmonella serovars, and 7 non-Salmonella strains. The serovar identifier region (SIR) primers produced a fragment only in S. Gallinarum and S. Pullorum strains, whereas the fragment from the ratA coding sequence, which was previously demonstrated to differentiate the 2 biovars, was also amplified from other Salmonella serovars. Our results showed that the combination of both SIR and ratA amplifications could be used to identify as well as to differentiate colonies of S. Gallinarum and S. Pullorum reliably. Thus, we believe this methodology can be a useful ancillary tool for routine veterinary diagnostic laboratories by providing rapid, accurate results.
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spelling Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assayDuplex PCRfowl typhoidpullorum diseaseSalmonella GallinarumSalmonella PullorumSalmonella enterica subsp. enterica serovar Gallinarum biovar Gallinarum (S. Gallinarum) and biovar Pullorum (S. Pullorum) are 2 poultry pathogens that cause major economic losses to the poultry industry worldwide. Control of both diseases mainly relies on the adoption of biosecurity programs, and success is dependent on accurate and fast detection. Based on this concept, we developed a duplex PCR assay, targeting 2 chromosomal sequences, which allowed us to precisely identify and differentiate S. Gallinarum and S. Pullorum field strains. This assay was validated by testing genomic DNA from 40 S. Gallinarum and 29 S. Pullorum field strains, 87 other Salmonella serovars, and 7 non-Salmonella strains. The serovar identifier region (SIR) primers produced a fragment only in S. Gallinarum and S. Pullorum strains, whereas the fragment from the ratA coding sequence, which was previously demonstrated to differentiate the 2 biovars, was also amplified from other Salmonella serovars. Our results showed that the combination of both SIR and ratA amplifications could be used to identify as well as to differentiate colonies of S. Gallinarum and S. Pullorum reliably. Thus, we believe this methodology can be a useful ancillary tool for routine veterinary diagnostic laboratories by providing rapid, accurate results.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Sao Paulo State Univ, Fac Agr & Vet Sci, Sao Paulo, BrazilUniv Fed Paraiba, Agron Sci Ctr, Campus 2, BR-58397000 Areia, Paraiba, BrazilUniv Nottingham, Sch Vet Med & Sci, Loughborough, Leics, EnglandSao Paulo State Univ, Fac Agr & Vet Sci, Sao Paulo, BrazilFAPESP: 2011/23483-1Sage Publications IncUniversidade Estadual Paulista (Unesp)Univ Fed ParaibaUniv NottinghamAlves Batista, Diego Felipe [UNESP]Freitas Neto, Oliveiro Caetano deAlmeida, Adriana Maria de [UNESP]Barrow, Paul AndrewBarbosa, Fernanda de Oliveira [UNESP]Berchieri Junior, Angelo [UNESP]2018-11-27T17:21:11Z2018-11-27T17:21:11Z2016-07-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article419-422application/pdfhttp://dx.doi.org/10.1177/1040638716651466Journal Of Veterinary Diagnostic Investigation. Thousand Oaks: Sage Publications Inc, v. 28, n. 4, p. 419-422, 2016.1040-6387http://hdl.handle.net/11449/16523210.1177/1040638716651466WOS:000379532600010WOS000379532600010.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal Of Veterinary Diagnostic Investigation0,621info:eu-repo/semantics/openAccess2024-01-09T06:31:17Zoai:repositorio.unesp.br:11449/165232Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-01-09T06:31:17Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
title Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
spellingShingle Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
Alves Batista, Diego Felipe [UNESP]
Duplex PCR
fowl typhoid
pullorum disease
Salmonella Gallinarum
Salmonella Pullorum
title_short Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
title_full Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
title_fullStr Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
title_full_unstemmed Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
title_sort Molecular identification of Salmonella enterica subsp enterica serovar Gallinarum biovars Gallinarum and Pullorum by a duplex PCR assay
author Alves Batista, Diego Felipe [UNESP]
author_facet Alves Batista, Diego Felipe [UNESP]
Freitas Neto, Oliveiro Caetano de
Almeida, Adriana Maria de [UNESP]
Barrow, Paul Andrew
Barbosa, Fernanda de Oliveira [UNESP]
Berchieri Junior, Angelo [UNESP]
author_role author
author2 Freitas Neto, Oliveiro Caetano de
Almeida, Adriana Maria de [UNESP]
Barrow, Paul Andrew
Barbosa, Fernanda de Oliveira [UNESP]
Berchieri Junior, Angelo [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Univ Fed Paraiba
Univ Nottingham
dc.contributor.author.fl_str_mv Alves Batista, Diego Felipe [UNESP]
Freitas Neto, Oliveiro Caetano de
Almeida, Adriana Maria de [UNESP]
Barrow, Paul Andrew
Barbosa, Fernanda de Oliveira [UNESP]
Berchieri Junior, Angelo [UNESP]
dc.subject.por.fl_str_mv Duplex PCR
fowl typhoid
pullorum disease
Salmonella Gallinarum
Salmonella Pullorum
topic Duplex PCR
fowl typhoid
pullorum disease
Salmonella Gallinarum
Salmonella Pullorum
description Salmonella enterica subsp. enterica serovar Gallinarum biovar Gallinarum (S. Gallinarum) and biovar Pullorum (S. Pullorum) are 2 poultry pathogens that cause major economic losses to the poultry industry worldwide. Control of both diseases mainly relies on the adoption of biosecurity programs, and success is dependent on accurate and fast detection. Based on this concept, we developed a duplex PCR assay, targeting 2 chromosomal sequences, which allowed us to precisely identify and differentiate S. Gallinarum and S. Pullorum field strains. This assay was validated by testing genomic DNA from 40 S. Gallinarum and 29 S. Pullorum field strains, 87 other Salmonella serovars, and 7 non-Salmonella strains. The serovar identifier region (SIR) primers produced a fragment only in S. Gallinarum and S. Pullorum strains, whereas the fragment from the ratA coding sequence, which was previously demonstrated to differentiate the 2 biovars, was also amplified from other Salmonella serovars. Our results showed that the combination of both SIR and ratA amplifications could be used to identify as well as to differentiate colonies of S. Gallinarum and S. Pullorum reliably. Thus, we believe this methodology can be a useful ancillary tool for routine veterinary diagnostic laboratories by providing rapid, accurate results.
publishDate 2016
dc.date.none.fl_str_mv 2016-07-01
2018-11-27T17:21:11Z
2018-11-27T17:21:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1177/1040638716651466
Journal Of Veterinary Diagnostic Investigation. Thousand Oaks: Sage Publications Inc, v. 28, n. 4, p. 419-422, 2016.
1040-6387
http://hdl.handle.net/11449/165232
10.1177/1040638716651466
WOS:000379532600010
WOS000379532600010.pdf
url http://dx.doi.org/10.1177/1040638716651466
http://hdl.handle.net/11449/165232
identifier_str_mv Journal Of Veterinary Diagnostic Investigation. Thousand Oaks: Sage Publications Inc, v. 28, n. 4, p. 419-422, 2016.
1040-6387
10.1177/1040638716651466
WOS:000379532600010
WOS000379532600010.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal Of Veterinary Diagnostic Investigation
0,621
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 419-422
application/pdf
dc.publisher.none.fl_str_mv Sage Publications Inc
publisher.none.fl_str_mv Sage Publications Inc
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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