Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery

Detalhes bibliográficos
Autor(a) principal: Osco, Lucas Prado
Data de Publicação: 2019
Outros Autores: Marques Ramos, Ana Paula, Pereira, Danilo Roberto, Saito Moriya, Erika Akemi [UNESP], Imai, Nilton Nobuhiro [UNESP], Matsubara, Edson Takashi, Estrabis, Nayara, Souza, Mauricio de, Marcato Junior, Jose, Goncalves, Wesley Nunes, Li, Jonathan, Liesenberg, Veraldo, Creste, Jose Eduardo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/rs11242925
http://hdl.handle.net/11449/196489
Resumo: The traditional method of measuring nitrogen content in plants is a time-consuming and labor-intensive task. Spectral vegetation indices extracted from unmanned aerial vehicle (UAV) images and machine learning algorithms have been proved effective in assisting nutritional analysis in plants. Still, this analysis has not considered the combination of spectral indices and machine learning algorithms to predict nitrogen in tree-canopy structures. This paper proposes a new framework to infer the nitrogen content in citrus-tree at a canopy-level using spectral vegetation indices processed with the random forest algorithm. A total of 33 spectral indices were estimated from multispectral images acquired with a UAV-based sensor. Leaf samples were gathered from different planting-fields and the leaf nitrogen content (LNC) was measured in the laboratory, and later converted into the canopy nitrogen content (CNC). To evaluate the robustness of the proposed framework, we compared it with other machine learning algorithms. We used 33,600 citrus trees to evaluate the performance of the machine learning models. The random forest algorithm had higher performance in predicting CNC than all models tested, reaching an R-2 of 0.90, MAE of 0.341 gkg(-1) and MSE of 0.307 gkg(-1). We demonstrated that our approach is able to reduce the need for chemical analysis of the leaf tissue and optimizes citrus orchard CNC monitoring.
id UNSP_817a1db6e60ba6d2ae6a59d1bfc74d68
oai_identifier_str oai:repositorio.unesp.br:11449/196489
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-ImageryUAV multispectral imageryspectral vegetation indicesmachine learningplant nutritionThe traditional method of measuring nitrogen content in plants is a time-consuming and labor-intensive task. Spectral vegetation indices extracted from unmanned aerial vehicle (UAV) images and machine learning algorithms have been proved effective in assisting nutritional analysis in plants. Still, this analysis has not considered the combination of spectral indices and machine learning algorithms to predict nitrogen in tree-canopy structures. This paper proposes a new framework to infer the nitrogen content in citrus-tree at a canopy-level using spectral vegetation indices processed with the random forest algorithm. A total of 33 spectral indices were estimated from multispectral images acquired with a UAV-based sensor. Leaf samples were gathered from different planting-fields and the leaf nitrogen content (LNC) was measured in the laboratory, and later converted into the canopy nitrogen content (CNC). To evaluate the robustness of the proposed framework, we compared it with other machine learning algorithms. We used 33,600 citrus trees to evaluate the performance of the machine learning models. The random forest algorithm had higher performance in predicting CNC than all models tested, reaching an R-2 of 0.90, MAE of 0.341 gkg(-1) and MSE of 0.307 gkg(-1). We demonstrated that our approach is able to reduce the need for chemical analysis of the leaf tissue and optimizes citrus orchard CNC monitoring.Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)FAPESCConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Fed Mato Grosso do Sul, Fac Engn Architecture & Urbanism & Geog, Ave Costa E Silva, BR-79070900 Campo Grande, MS, BrazilUniv Western Sao Paulo, Environm & Reg Dev, R Jose Bongiovani,700-Cidade Univ, BR-19050920 Presidente Prudente, BrazilSao Paulo State Univ, Dept Cartog Sci, BR-19060900 Presidente Prudente, BrazilUniv Fed Mato Grosso do Sul, Fac Comp Sci, Ave Costa E Silva, BR-79070900 Campo Grande, MS, BrazilUniv Waterloo, Dept Geog & Environm Management, Waterloo, ON N2L 3G1, CanadaUniv Waterloo, Dept Syst Design Engn, Waterloo, ON N2L 3G1, CanadaSanta Catarina State Univ UDESC, Forest Engn Dept, Ave Luiz de Camoes 2090, BR-88520000 Conta Dinheiro, SC, BrazilUniv Western Sao Paulo, Agron Dev, R Jose Bongiovani,700 Cidade Univ, BR-19050920 Presidente Prudente, BrazilSao Paulo State Univ, Dept Cartog Sci, BR-19060900 Presidente Prudente, BrazilCAPES: p: 88881.311850/2018-01FAPESC: 2017TR1762CNPq: 313887/2018-7MdpiUniversidade Federal de Mato Grosso do Sul (UFMS)Univ Western Sao PauloUniversidade Estadual Paulista (Unesp)Univ WaterlooSanta Catarina State Univ UDESCOsco, Lucas PradoMarques Ramos, Ana PaulaPereira, Danilo RobertoSaito Moriya, Erika Akemi [UNESP]Imai, Nilton Nobuhiro [UNESP]Matsubara, Edson TakashiEstrabis, NayaraSouza, Mauricio deMarcato Junior, JoseGoncalves, Wesley NunesLi, JonathanLiesenberg, VeraldoCreste, Jose Eduardo2020-12-10T19:46:39Z2020-12-10T19:46:39Z2019-12-02info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article17http://dx.doi.org/10.3390/rs11242925Remote Sensing. Basel: Mdpi, v. 11, n. 24, 17 p., 2019.http://hdl.handle.net/11449/19648910.3390/rs11242925WOS:00050733340004129857711025053300000-0003-0516-0567Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengRemote Sensinginfo:eu-repo/semantics/openAccess2024-06-18T15:01:52Zoai:repositorio.unesp.br:11449/196489Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:28:57.528164Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
title Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
spellingShingle Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
Osco, Lucas Prado
UAV multispectral imagery
spectral vegetation indices
machine learning
plant nutrition
title_short Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
title_full Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
title_fullStr Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
title_full_unstemmed Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
title_sort Predicting Canopy Nitrogen Content in Citrus-Trees Using Random Forest Algorithm Associated to Spectral Vegetation Indices from UAV-Imagery
author Osco, Lucas Prado
author_facet Osco, Lucas Prado
Marques Ramos, Ana Paula
Pereira, Danilo Roberto
Saito Moriya, Erika Akemi [UNESP]
Imai, Nilton Nobuhiro [UNESP]
Matsubara, Edson Takashi
Estrabis, Nayara
Souza, Mauricio de
Marcato Junior, Jose
Goncalves, Wesley Nunes
Li, Jonathan
Liesenberg, Veraldo
Creste, Jose Eduardo
author_role author
author2 Marques Ramos, Ana Paula
Pereira, Danilo Roberto
Saito Moriya, Erika Akemi [UNESP]
Imai, Nilton Nobuhiro [UNESP]
Matsubara, Edson Takashi
Estrabis, Nayara
Souza, Mauricio de
Marcato Junior, Jose
Goncalves, Wesley Nunes
Li, Jonathan
Liesenberg, Veraldo
Creste, Jose Eduardo
author2_role author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de Mato Grosso do Sul (UFMS)
Univ Western Sao Paulo
Universidade Estadual Paulista (Unesp)
Univ Waterloo
Santa Catarina State Univ UDESC
dc.contributor.author.fl_str_mv Osco, Lucas Prado
Marques Ramos, Ana Paula
Pereira, Danilo Roberto
Saito Moriya, Erika Akemi [UNESP]
Imai, Nilton Nobuhiro [UNESP]
Matsubara, Edson Takashi
Estrabis, Nayara
Souza, Mauricio de
Marcato Junior, Jose
Goncalves, Wesley Nunes
Li, Jonathan
Liesenberg, Veraldo
Creste, Jose Eduardo
dc.subject.por.fl_str_mv UAV multispectral imagery
spectral vegetation indices
machine learning
plant nutrition
topic UAV multispectral imagery
spectral vegetation indices
machine learning
plant nutrition
description The traditional method of measuring nitrogen content in plants is a time-consuming and labor-intensive task. Spectral vegetation indices extracted from unmanned aerial vehicle (UAV) images and machine learning algorithms have been proved effective in assisting nutritional analysis in plants. Still, this analysis has not considered the combination of spectral indices and machine learning algorithms to predict nitrogen in tree-canopy structures. This paper proposes a new framework to infer the nitrogen content in citrus-tree at a canopy-level using spectral vegetation indices processed with the random forest algorithm. A total of 33 spectral indices were estimated from multispectral images acquired with a UAV-based sensor. Leaf samples were gathered from different planting-fields and the leaf nitrogen content (LNC) was measured in the laboratory, and later converted into the canopy nitrogen content (CNC). To evaluate the robustness of the proposed framework, we compared it with other machine learning algorithms. We used 33,600 citrus trees to evaluate the performance of the machine learning models. The random forest algorithm had higher performance in predicting CNC than all models tested, reaching an R-2 of 0.90, MAE of 0.341 gkg(-1) and MSE of 0.307 gkg(-1). We demonstrated that our approach is able to reduce the need for chemical analysis of the leaf tissue and optimizes citrus orchard CNC monitoring.
publishDate 2019
dc.date.none.fl_str_mv 2019-12-02
2020-12-10T19:46:39Z
2020-12-10T19:46:39Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/rs11242925
Remote Sensing. Basel: Mdpi, v. 11, n. 24, 17 p., 2019.
http://hdl.handle.net/11449/196489
10.3390/rs11242925
WOS:000507333400041
2985771102505330
0000-0003-0516-0567
url http://dx.doi.org/10.3390/rs11242925
http://hdl.handle.net/11449/196489
identifier_str_mv Remote Sensing. Basel: Mdpi, v. 11, n. 24, 17 p., 2019.
10.3390/rs11242925
WOS:000507333400041
2985771102505330
0000-0003-0516-0567
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Remote Sensing
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 17
dc.publisher.none.fl_str_mv Mdpi
publisher.none.fl_str_mv Mdpi
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129324460539904