MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)

Detalhes bibliográficos
Autor(a) principal: Clivati, Debora
Data de Publicação: 2012
Outros Autores: Gitzendanner, Matthew Aaron, Silva Hilsdorf, Alexandre Wagner, Araujo, Welington Luiz, Oliveira de Miranda, Vitor Fernandes [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3732/ajb.1200080
http://hdl.handle.net/11449/39854
Resumo: Premise of the study: Microsatellite markers were developed to study the genetic diversity and population structure of the carnivorous bladderwort Utricularia reniformis, which is endemic to the Atlantic Forest of southern and southeastern Brazil. Cross-species amplification was tested in U. gibba, U. neottioides, U. subulata, and Pinguicula benedicta.Methods and Results: The U. reniformis genome was sequenced in a 454 GS FLX sequencer, and eight primer sets were developed based on the microsatellites identified from the reads. All loci are polymorphic, showing 1.6 to 4.8 alleles per population. Preliminary results show that primer sets are suitable for population-level studies. Cross-species amplifi cation was successful in three other Utricularia species and one Pinguicula species.Conclusions: Markers developed in this study provide tools for analyses of intra- and interpopulation genetic diversity in Utricularia and Pinguicula.
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spelling MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)Atlantic Forestbladderwortsendemic plantsgenetic diversityLentibulariaceaeUtricularia reniformisPremise of the study: Microsatellite markers were developed to study the genetic diversity and population structure of the carnivorous bladderwort Utricularia reniformis, which is endemic to the Atlantic Forest of southern and southeastern Brazil. Cross-species amplification was tested in U. gibba, U. neottioides, U. subulata, and Pinguicula benedicta.Methods and Results: The U. reniformis genome was sequenced in a 454 GS FLX sequencer, and eight primer sets were developed based on the microsatellites identified from the reads. All loci are polymorphic, showing 1.6 to 4.8 alleles per population. Preliminary results show that primer sets are suitable for population-level studies. Cross-species amplifi cation was successful in three other Utricularia species and one Pinguicula species.Conclusions: Markers developed in this study provide tools for analyses of intra- and interpopulation genetic diversity in Utricularia and Pinguicula.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Univ Mogi das Cruzes, Nucleo Integrado Biotecnol, BR-08780911 São Paulo, BrazilUniv Florida, Dept Biol, Gainesville, FL 32611 USAUniv São Paulo, Dept Microbiol, BR-05508900 São Paulo, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, BR-14884900 São Paulo, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, BR-14884900 São Paulo, BrazilFAPESP: 08/22239-9FAPESP: 07/58277-7CAPES: 5316/10-3Botanical Soc Amer IncUniv Mogi das CruzesUniv FloridaUniversidade de São Paulo (USP)Universidade Estadual Paulista (Unesp)Clivati, DeboraGitzendanner, Matthew AaronSilva Hilsdorf, Alexandre WagnerAraujo, Welington LuizOliveira de Miranda, Vitor Fernandes [UNESP]2014-05-20T15:30:30Z2014-05-20T15:30:30Z2012-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articleE375-E378http://dx.doi.org/10.3732/ajb.1200080American Journal of Botany. St Louis: Botanical Soc Amer Inc, v. 99, n. 9, p. E375-E378, 2012.0002-9122http://hdl.handle.net/11449/3985410.3732/ajb.1200080WOS:000308689800011Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengAmerican Journal of Botany2.7881,499info:eu-repo/semantics/openAccess2021-10-23T10:40:55Zoai:repositorio.unesp.br:11449/39854Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T10:40:55Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
title MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
spellingShingle MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
Clivati, Debora
Atlantic Forest
bladderworts
endemic plants
genetic diversity
Lentibulariaceae
Utricularia reniformis
title_short MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
title_full MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
title_fullStr MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
title_full_unstemmed MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
title_sort MICROSATELLITE MARKERS DEVELOPED FOR UTRICULARIA RENIFORMIS (LENTIBULARIACEAE)
author Clivati, Debora
author_facet Clivati, Debora
Gitzendanner, Matthew Aaron
Silva Hilsdorf, Alexandre Wagner
Araujo, Welington Luiz
Oliveira de Miranda, Vitor Fernandes [UNESP]
author_role author
author2 Gitzendanner, Matthew Aaron
Silva Hilsdorf, Alexandre Wagner
Araujo, Welington Luiz
Oliveira de Miranda, Vitor Fernandes [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Univ Mogi das Cruzes
Univ Florida
Universidade de São Paulo (USP)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Clivati, Debora
Gitzendanner, Matthew Aaron
Silva Hilsdorf, Alexandre Wagner
Araujo, Welington Luiz
Oliveira de Miranda, Vitor Fernandes [UNESP]
dc.subject.por.fl_str_mv Atlantic Forest
bladderworts
endemic plants
genetic diversity
Lentibulariaceae
Utricularia reniformis
topic Atlantic Forest
bladderworts
endemic plants
genetic diversity
Lentibulariaceae
Utricularia reniformis
description Premise of the study: Microsatellite markers were developed to study the genetic diversity and population structure of the carnivorous bladderwort Utricularia reniformis, which is endemic to the Atlantic Forest of southern and southeastern Brazil. Cross-species amplification was tested in U. gibba, U. neottioides, U. subulata, and Pinguicula benedicta.Methods and Results: The U. reniformis genome was sequenced in a 454 GS FLX sequencer, and eight primer sets were developed based on the microsatellites identified from the reads. All loci are polymorphic, showing 1.6 to 4.8 alleles per population. Preliminary results show that primer sets are suitable for population-level studies. Cross-species amplifi cation was successful in three other Utricularia species and one Pinguicula species.Conclusions: Markers developed in this study provide tools for analyses of intra- and interpopulation genetic diversity in Utricularia and Pinguicula.
publishDate 2012
dc.date.none.fl_str_mv 2012-09-01
2014-05-20T15:30:30Z
2014-05-20T15:30:30Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3732/ajb.1200080
American Journal of Botany. St Louis: Botanical Soc Amer Inc, v. 99, n. 9, p. E375-E378, 2012.
0002-9122
http://hdl.handle.net/11449/39854
10.3732/ajb.1200080
WOS:000308689800011
url http://dx.doi.org/10.3732/ajb.1200080
http://hdl.handle.net/11449/39854
identifier_str_mv American Journal of Botany. St Louis: Botanical Soc Amer Inc, v. 99, n. 9, p. E375-E378, 2012.
0002-9122
10.3732/ajb.1200080
WOS:000308689800011
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv American Journal of Botany
2.788
1,499
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv E375-E378
dc.publisher.none.fl_str_mv Botanical Soc Amer Inc
publisher.none.fl_str_mv Botanical Soc Amer Inc
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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