The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System

Detalhes bibliográficos
Autor(a) principal: de Azevedo, Bruna Luiza
Data de Publicação: 2022
Outros Autores: Araújo Júnior, João Pessoa [UNESP], Ullmann, Leila Sabrina [UNESP], Rodrigues, Rodrigo Araújo Lima, Abrahão, Jônatas Santos
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/v14020206
http://hdl.handle.net/11449/230247
Resumo: Mimiviruses are giant viruses of amoeba that can be found in association with virophages. These satellite-like viruses are dependent on the mimivirus viral factory to replicate. Mimiviruses can also be associated with linear DNA molecules called transpovirons. Transpovirons and virophages are important drivers of giant virus evolution although they are still poorly studied elements. Here, we describe the isolation and genomic characterization of a mimivirus/virophage/transpoviron tripartite system from Brazil. We analyzed transmission electron microscopy images and performed genome sequencing and assembly, gene annotation, and phylogenetic analysis. Our data confirm the isolation of a lineage A mimivirus (1.2 Mb/1012 ORFs), called mimivirus argentum, and a sputnik virophage (18,880 bp/20 ORFs). We also detected a third sequence corresponding to a transpoviron from clade A (6365 bp/6 ORFs) that presents small terminal inverted repeats (77 nt). The main genomic features of mimivirus argentum and of its virophage/transpoviron elements corroborates with what is described for other known elements. This highlights that this triple genomic and biological interaction may be ancient and well-conserved. The results expand the basic knowledge about unique and little-known elements and pave the way to future studies that might contribute to a better understanding of this tripartite relationship.
id UNSP_8e1df0e270bd8c67fc57221a9c77faf5
oai_identifier_str oai:repositorio.unesp.br:11449/230247
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite SystemGiant virusesMimivirusTranspovironVirophageMimiviruses are giant viruses of amoeba that can be found in association with virophages. These satellite-like viruses are dependent on the mimivirus viral factory to replicate. Mimiviruses can also be associated with linear DNA molecules called transpovirons. Transpovirons and virophages are important drivers of giant virus evolution although they are still poorly studied elements. Here, we describe the isolation and genomic characterization of a mimivirus/virophage/transpoviron tripartite system from Brazil. We analyzed transmission electron microscopy images and performed genome sequencing and assembly, gene annotation, and phylogenetic analysis. Our data confirm the isolation of a lineage A mimivirus (1.2 Mb/1012 ORFs), called mimivirus argentum, and a sputnik virophage (18,880 bp/20 ORFs). We also detected a third sequence corresponding to a transpoviron from clade A (6365 bp/6 ORFs) that presents small terminal inverted repeats (77 nt). The main genomic features of mimivirus argentum and of its virophage/transpoviron elements corroborates with what is described for other known elements. This highlights that this triple genomic and biological interaction may be ancient and well-conserved. The results expand the basic knowledge about unique and little-known elements and pave the way to future studies that might contribute to a better understanding of this tripartite relationship.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Laboratório de Vírus Departamento de Microbiologia Universidade Federal de Minas Gerais (UFMG), MGLaboratório de Virologia Departamento de Microbiologia e Imunologia Instituto de Biotecnologia Universidade Estadual Paulista (Unesp), Alameda das Tecomarias s/n, Chácara Capão Bonito, SPLaboratório de Virologia Departamento de Microbiologia e Imunologia Instituto de Biotecnologia Universidade Estadual Paulista (Unesp), Alameda das Tecomarias s/n, Chácara Capão Bonito, SPCNPq: 302081/2018-6Universidade Federal de Minas Gerais (UFMG)Universidade Estadual Paulista (UNESP)de Azevedo, Bruna LuizaAraújo Júnior, João Pessoa [UNESP]Ullmann, Leila Sabrina [UNESP]Rodrigues, Rodrigo Araújo LimaAbrahão, Jônatas Santos2022-04-29T08:38:43Z2022-04-29T08:38:43Z2022-02-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/v14020206Viruses, v. 14, n. 2, 2022.1999-4915http://hdl.handle.net/11449/23024710.3390/v140202062-s2.0-85123110889Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengVirusesinfo:eu-repo/semantics/openAccess2022-04-29T08:38:43Zoai:repositorio.unesp.br:11449/230247Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:32:42.513514Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
title The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
spellingShingle The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
de Azevedo, Bruna Luiza
Giant viruses
Mimivirus
Transpoviron
Virophage
title_short The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
title_full The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
title_fullStr The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
title_full_unstemmed The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
title_sort The Discovery of a New Mimivirus Isolate in Association with Virophage-Transpoviron Elements in Brazil Highlights the Main Genomic and Evolutionary Features of This Tripartite System
author de Azevedo, Bruna Luiza
author_facet de Azevedo, Bruna Luiza
Araújo Júnior, João Pessoa [UNESP]
Ullmann, Leila Sabrina [UNESP]
Rodrigues, Rodrigo Araújo Lima
Abrahão, Jônatas Santos
author_role author
author2 Araújo Júnior, João Pessoa [UNESP]
Ullmann, Leila Sabrina [UNESP]
Rodrigues, Rodrigo Araújo Lima
Abrahão, Jônatas Santos
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de Minas Gerais (UFMG)
Universidade Estadual Paulista (UNESP)
dc.contributor.author.fl_str_mv de Azevedo, Bruna Luiza
Araújo Júnior, João Pessoa [UNESP]
Ullmann, Leila Sabrina [UNESP]
Rodrigues, Rodrigo Araújo Lima
Abrahão, Jônatas Santos
dc.subject.por.fl_str_mv Giant viruses
Mimivirus
Transpoviron
Virophage
topic Giant viruses
Mimivirus
Transpoviron
Virophage
description Mimiviruses are giant viruses of amoeba that can be found in association with virophages. These satellite-like viruses are dependent on the mimivirus viral factory to replicate. Mimiviruses can also be associated with linear DNA molecules called transpovirons. Transpovirons and virophages are important drivers of giant virus evolution although they are still poorly studied elements. Here, we describe the isolation and genomic characterization of a mimivirus/virophage/transpoviron tripartite system from Brazil. We analyzed transmission electron microscopy images and performed genome sequencing and assembly, gene annotation, and phylogenetic analysis. Our data confirm the isolation of a lineage A mimivirus (1.2 Mb/1012 ORFs), called mimivirus argentum, and a sputnik virophage (18,880 bp/20 ORFs). We also detected a third sequence corresponding to a transpoviron from clade A (6365 bp/6 ORFs) that presents small terminal inverted repeats (77 nt). The main genomic features of mimivirus argentum and of its virophage/transpoviron elements corroborates with what is described for other known elements. This highlights that this triple genomic and biological interaction may be ancient and well-conserved. The results expand the basic knowledge about unique and little-known elements and pave the way to future studies that might contribute to a better understanding of this tripartite relationship.
publishDate 2022
dc.date.none.fl_str_mv 2022-04-29T08:38:43Z
2022-04-29T08:38:43Z
2022-02-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/v14020206
Viruses, v. 14, n. 2, 2022.
1999-4915
http://hdl.handle.net/11449/230247
10.3390/v14020206
2-s2.0-85123110889
url http://dx.doi.org/10.3390/v14020206
http://hdl.handle.net/11449/230247
identifier_str_mv Viruses, v. 14, n. 2, 2022.
1999-4915
10.3390/v14020206
2-s2.0-85123110889
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Viruses
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129217486913536