Applying enhancement filters in the pre-processing of images of lymphoma

Detalhes bibliográficos
Autor(a) principal: Silva, Sérgio Henrique
Data de Publicação: 2015
Outros Autores: Nascimento, Marcelo Zanchetta do, Neves, Leandro Alves [UNESP], Batista, Valério Ramos
Tipo de documento: Artigo de conferência
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://iopscience.iop.org/article/10.1088/1742-6596/574/1/012122/meta
http://hdl.handle.net/11449/128817
Resumo: Lymphoma is a type of cancer that affects the immune system, and is classified as Hodgkin or non-Hodgkin. It is one of the ten types of cancer that are the most common on earth. Among all malignant neoplasms diagnosed in the world, lymphoma ranges from three to four percent of them. Our work presents a study of some filters devoted to enhancing images of lymphoma at the pre-processing step. Here the enhancement is useful for removing noise from the digital images. We have analysed the noise caused by different sources like room vibration, scraps and defocusing, and in the following classes of lymphoma: follicular, mantle cell and B-cell chronic lymphocytic leukemia. The filters Gaussian, Median and Mean-Shift were applied to different colour models (RGB, Lab and HSV). Afterwards, we performed a quantitative analysis of the images by means of the Structural Similarity Index. This was done in order to evaluate the similarity between the images. In all cases we have obtained a certainty of at least 75%, which rises to 99% if one considers only HSV. Namely, we have concluded that HSV is an important choice of colour model at pre-processing histological images of lymphoma, because in this case the resulting image will get the best enhancement.
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spelling Applying enhancement filters in the pre-processing of images of lymphomaLymphoma is a type of cancer that affects the immune system, and is classified as Hodgkin or non-Hodgkin. It is one of the ten types of cancer that are the most common on earth. Among all malignant neoplasms diagnosed in the world, lymphoma ranges from three to four percent of them. Our work presents a study of some filters devoted to enhancing images of lymphoma at the pre-processing step. Here the enhancement is useful for removing noise from the digital images. We have analysed the noise caused by different sources like room vibration, scraps and defocusing, and in the following classes of lymphoma: follicular, mantle cell and B-cell chronic lymphocytic leukemia. The filters Gaussian, Median and Mean-Shift were applied to different colour models (RGB, Lab and HSV). Afterwards, we performed a quantitative analysis of the images by means of the Structural Similarity Index. This was done in order to evaluate the similarity between the images. In all cases we have obtained a certainty of at least 75%, which rises to 99% if one considers only HSV. Namely, we have concluded that HSV is an important choice of colour model at pre-processing histological images of lymphoma, because in this case the resulting image will get the best enhancement.Universidade Federal de Uberlândia, Faculdade de Engenharia MecânicaUniversidade Federal de Uberlândia, Faculdade de Ciência da ComputaçãoUniversidade Federal do ABC, Centro de Matemática, Ciência da Computação e CogniçãoUniversidade Estadual Paulista, Departamento de Ciência da Computação e Estatística, Instituto de Biociências, Letras e Ciências Exatas de São José do Rio PretoIop Publishing LtdUniversidade Federal de Uberlândia (UFU)Universidade Estadual Paulista (Unesp)Universidade Federal do ABC (UFABC)Silva, Sérgio HenriqueNascimento, Marcelo Zanchetta doNeves, Leandro Alves [UNESP]Batista, Valério Ramos2015-10-21T13:13:59Z2015-10-21T13:13:59Z2015-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObject1-4application/pdfhttp://iopscience.iop.org/article/10.1088/1742-6596/574/1/012122/meta3rd International Conference On Mathematical Modeling In Physical Sciences (IC-MSQUARE 2014). Bristol: Iop Publishing Ltd, v. 574, p. 1-4, 2015.1742-6588http://hdl.handle.net/11449/12881710.1088/1742-6596/574/1/012122WOS:000352595600122WOS000352595600122.pdf2139053814879312Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPeng3rd International Conference On Mathematical Modeling In Physical Sciences (IC-MSQUARE 2014)0,241info:eu-repo/semantics/openAccess2023-10-30T06:12:23Zoai:repositorio.unesp.br:11449/128817Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-10-30T06:12:23Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Applying enhancement filters in the pre-processing of images of lymphoma
title Applying enhancement filters in the pre-processing of images of lymphoma
spellingShingle Applying enhancement filters in the pre-processing of images of lymphoma
Silva, Sérgio Henrique
title_short Applying enhancement filters in the pre-processing of images of lymphoma
title_full Applying enhancement filters in the pre-processing of images of lymphoma
title_fullStr Applying enhancement filters in the pre-processing of images of lymphoma
title_full_unstemmed Applying enhancement filters in the pre-processing of images of lymphoma
title_sort Applying enhancement filters in the pre-processing of images of lymphoma
author Silva, Sérgio Henrique
author_facet Silva, Sérgio Henrique
Nascimento, Marcelo Zanchetta do
Neves, Leandro Alves [UNESP]
Batista, Valério Ramos
author_role author
author2 Nascimento, Marcelo Zanchetta do
Neves, Leandro Alves [UNESP]
Batista, Valério Ramos
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de Uberlândia (UFU)
Universidade Estadual Paulista (Unesp)
Universidade Federal do ABC (UFABC)
dc.contributor.author.fl_str_mv Silva, Sérgio Henrique
Nascimento, Marcelo Zanchetta do
Neves, Leandro Alves [UNESP]
Batista, Valério Ramos
description Lymphoma is a type of cancer that affects the immune system, and is classified as Hodgkin or non-Hodgkin. It is one of the ten types of cancer that are the most common on earth. Among all malignant neoplasms diagnosed in the world, lymphoma ranges from three to four percent of them. Our work presents a study of some filters devoted to enhancing images of lymphoma at the pre-processing step. Here the enhancement is useful for removing noise from the digital images. We have analysed the noise caused by different sources like room vibration, scraps and defocusing, and in the following classes of lymphoma: follicular, mantle cell and B-cell chronic lymphocytic leukemia. The filters Gaussian, Median and Mean-Shift were applied to different colour models (RGB, Lab and HSV). Afterwards, we performed a quantitative analysis of the images by means of the Structural Similarity Index. This was done in order to evaluate the similarity between the images. In all cases we have obtained a certainty of at least 75%, which rises to 99% if one considers only HSV. Namely, we have concluded that HSV is an important choice of colour model at pre-processing histological images of lymphoma, because in this case the resulting image will get the best enhancement.
publishDate 2015
dc.date.none.fl_str_mv 2015-10-21T13:13:59Z
2015-10-21T13:13:59Z
2015-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
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format conferenceObject
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://iopscience.iop.org/article/10.1088/1742-6596/574/1/012122/meta
3rd International Conference On Mathematical Modeling In Physical Sciences (IC-MSQUARE 2014). Bristol: Iop Publishing Ltd, v. 574, p. 1-4, 2015.
1742-6588
http://hdl.handle.net/11449/128817
10.1088/1742-6596/574/1/012122
WOS:000352595600122
WOS000352595600122.pdf
2139053814879312
url http://iopscience.iop.org/article/10.1088/1742-6596/574/1/012122/meta
http://hdl.handle.net/11449/128817
identifier_str_mv 3rd International Conference On Mathematical Modeling In Physical Sciences (IC-MSQUARE 2014). Bristol: Iop Publishing Ltd, v. 574, p. 1-4, 2015.
1742-6588
10.1088/1742-6596/574/1/012122
WOS:000352595600122
WOS000352595600122.pdf
2139053814879312
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv 3rd International Conference On Mathematical Modeling In Physical Sciences (IC-MSQUARE 2014)
0,241
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
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dc.format.none.fl_str_mv 1-4
application/pdf
dc.publisher.none.fl_str_mv Iop Publishing Ltd
publisher.none.fl_str_mv Iop Publishing Ltd
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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