Identifying yeasts using surface enhanced Raman spectroscopy
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.saa.2019.04.010 http://hdl.handle.net/11449/187558 |
Resumo: | The molecular fingerprints of yeasts Saccharomyces cerevisiae, Dekkera bruxellensis, and Wickerhamomyces anomalus (former name Pichia anomala) have been examined using surface-enhanced Raman spectroscopy (SERS) and helium ion microscopy (HIM). The SERS spectra obtained from cell cultures (lysate and non-treated cells) distinguish between these very closely related fungal species. Highly SERS active silver nano-particles suitable for detecting complex biomolecules were fabricated using a simple synthesis route. The yeast samples mixed with aggregated Ag nanoparticles yielded highly enhanced and reproducible Raman signal owing to the high density of the hot spots at the junctions of two or more Ag nanoparticles and enabled to differentiate the three species based on their unique features (spectral fingerprint). We also collected SERS spectra of the three yeast species in beer medium to demonstrate the potential of the method for industrial application. These findings demonstrate the great potential of SERS for detection and identification of fungi species based on the biochemical compositions, even in a chemically complex sample. |
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Identifying yeasts using surface enhanced Raman spectroscopyAggregateHelium ion microscopySERSSilver nanoparticleYeastThe molecular fingerprints of yeasts Saccharomyces cerevisiae, Dekkera bruxellensis, and Wickerhamomyces anomalus (former name Pichia anomala) have been examined using surface-enhanced Raman spectroscopy (SERS) and helium ion microscopy (HIM). The SERS spectra obtained from cell cultures (lysate and non-treated cells) distinguish between these very closely related fungal species. Highly SERS active silver nano-particles suitable for detecting complex biomolecules were fabricated using a simple synthesis route. The yeast samples mixed with aggregated Ag nanoparticles yielded highly enhanced and reproducible Raman signal owing to the high density of the hot spots at the junctions of two or more Ag nanoparticles and enabled to differentiate the three species based on their unique features (spectral fingerprint). We also collected SERS spectra of the three yeast species in beer medium to demonstrate the potential of the method for industrial application. These findings demonstrate the great potential of SERS for detection and identification of fungi species based on the biochemical compositions, even in a chemically complex sample.TekesAcademy of FinlandFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Faculdade de Clências e Tecnologia (FCT)-Universidade Estadual Paulista (UNESP)-Presidente PrudenteInstitute of Intelligent Machines Chinese Academy of SciencesNanoScience Center Department of Physics University of Jyväskylä, P.O. Box 35 (YN)Faculty of Medicine and Health Technology BioMediTech Tampere University, Arvo Ylpön katu 34Fimlab Laboratories, Biokatu 4Faculdade de Clências e Tecnologia (FCT)-Universidade Estadual Paulista (UNESP)-Presidente PrudenteTekes: 1185/31/2013Academy of Finland: 136288FAPESP: 2013/14262-7FAPESP: 2016/06424-5Academy of Finland: 263526Universidade Estadual Paulista (Unesp)Chinese Academy of SciencesUniversity of JyväskyläTampere UniversityFimlab LaboratoriesLemma, Tibebe [UNESP]Wang, JinArstila, KaiHytönen, Vesa P.Toppari, J. Jussi2019-10-06T15:40:09Z2019-10-06T15:40:09Z2019-07-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article299-307http://dx.doi.org/10.1016/j.saa.2019.04.010Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy, v. 218, p. 299-307.1386-1425http://hdl.handle.net/11449/18755810.1016/j.saa.2019.04.0102-s2.0-85064322776Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengSpectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopyinfo:eu-repo/semantics/openAccess2021-10-23T09:20:11Zoai:repositorio.unesp.br:11449/187558Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:57:55.733282Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Identifying yeasts using surface enhanced Raman spectroscopy |
title |
Identifying yeasts using surface enhanced Raman spectroscopy |
spellingShingle |
Identifying yeasts using surface enhanced Raman spectroscopy Lemma, Tibebe [UNESP] Aggregate Helium ion microscopy SERS Silver nanoparticle Yeast |
title_short |
Identifying yeasts using surface enhanced Raman spectroscopy |
title_full |
Identifying yeasts using surface enhanced Raman spectroscopy |
title_fullStr |
Identifying yeasts using surface enhanced Raman spectroscopy |
title_full_unstemmed |
Identifying yeasts using surface enhanced Raman spectroscopy |
title_sort |
Identifying yeasts using surface enhanced Raman spectroscopy |
author |
Lemma, Tibebe [UNESP] |
author_facet |
Lemma, Tibebe [UNESP] Wang, Jin Arstila, Kai Hytönen, Vesa P. Toppari, J. Jussi |
author_role |
author |
author2 |
Wang, Jin Arstila, Kai Hytönen, Vesa P. Toppari, J. Jussi |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Chinese Academy of Sciences University of Jyväskylä Tampere University Fimlab Laboratories |
dc.contributor.author.fl_str_mv |
Lemma, Tibebe [UNESP] Wang, Jin Arstila, Kai Hytönen, Vesa P. Toppari, J. Jussi |
dc.subject.por.fl_str_mv |
Aggregate Helium ion microscopy SERS Silver nanoparticle Yeast |
topic |
Aggregate Helium ion microscopy SERS Silver nanoparticle Yeast |
description |
The molecular fingerprints of yeasts Saccharomyces cerevisiae, Dekkera bruxellensis, and Wickerhamomyces anomalus (former name Pichia anomala) have been examined using surface-enhanced Raman spectroscopy (SERS) and helium ion microscopy (HIM). The SERS spectra obtained from cell cultures (lysate and non-treated cells) distinguish between these very closely related fungal species. Highly SERS active silver nano-particles suitable for detecting complex biomolecules were fabricated using a simple synthesis route. The yeast samples mixed with aggregated Ag nanoparticles yielded highly enhanced and reproducible Raman signal owing to the high density of the hot spots at the junctions of two or more Ag nanoparticles and enabled to differentiate the three species based on their unique features (spectral fingerprint). We also collected SERS spectra of the three yeast species in beer medium to demonstrate the potential of the method for industrial application. These findings demonstrate the great potential of SERS for detection and identification of fungi species based on the biochemical compositions, even in a chemically complex sample. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T15:40:09Z 2019-10-06T15:40:09Z 2019-07-05 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.saa.2019.04.010 Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy, v. 218, p. 299-307. 1386-1425 http://hdl.handle.net/11449/187558 10.1016/j.saa.2019.04.010 2-s2.0-85064322776 |
url |
http://dx.doi.org/10.1016/j.saa.2019.04.010 http://hdl.handle.net/11449/187558 |
identifier_str_mv |
Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy, v. 218, p. 299-307. 1386-1425 10.1016/j.saa.2019.04.010 2-s2.0-85064322776 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
299-307 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129268911177728 |