Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
Autor(a) principal: | |
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Data de Publicação: | 2013 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.toxicon.2013.06.013 http://hdl.handle.net/11449/76562 |
Resumo: | Lys49-phospholipases A2 (Lys49-PLA2s) are proteins found in bothropic snake venoms (Viperidae family) and belong to a class of proteins which presents a phospholipase A2 scaffold but are catalytically inactive. These proteins (also known as PLA2s-like toxins) exert a pronounced local myotoxic effect and are not neutralized by antivenom, being their study relevant in terms of medical and scientific interest. Despite of the several studies reported in the literature for this class of proteins only a partial consensus has been achieved concerning their functional-structural relationships. In this work, we present a comprehensive structural and functional study with the MjTX-II, a dimeric Lys49-PLA2 from Bothrops moojeni venom which includes: (i) high-resolution crystal structure; (ii) dynamic light scattering and bioinformatics studies in order to confirm its biological assembly; (iii) myographic and electrophysiological studies and, (iv) comparative studies with other Lys49-PLA2s. These comparative analyses let us to get important insights into the role of Lys122 amino acid, previously indicated as responsible for Lys49-PLA2s catalytic inactivity and added important elements to establish the correct biological assembly for this class of proteins. Furthermore, we show two unique sequential features of MjTX-II (an amino acid insertion and a mutation) in comparison to all bothropic Lys49-PLA2s that lead to a distinct way of ligand binding at the toxin's hydrophobic channel and also, allowed the presence of an additional ligand molecule in this region. These facts suggest a possible particular mode of binding for long-chain ligands that interacts with MjTX-II hydrophobic channel, a feature that may directly affect the design of structure-based ligands for Lys49-PLA2s. © 2013 Elsevier Ltd. |
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Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-likeBothrops moojeni venomLys49-phospholipase A2Myographic studiesOligomeric assemblyX-ray crystallographyamino acidmyotoxin 2phospholipase A2snake venomunclassified druganimal experimentanimal tissuebioinformaticsBothropsbothrops moojenicatalysiscontrolled studycrystal structurecrystallizationelectrophysiologyhydrophobicityligand bindinglight scatteringmalemousemyographynonhumanpriority journalprotein functionX ray diffractionLys49-phospholipases A2 (Lys49-PLA2s) are proteins found in bothropic snake venoms (Viperidae family) and belong to a class of proteins which presents a phospholipase A2 scaffold but are catalytically inactive. These proteins (also known as PLA2s-like toxins) exert a pronounced local myotoxic effect and are not neutralized by antivenom, being their study relevant in terms of medical and scientific interest. Despite of the several studies reported in the literature for this class of proteins only a partial consensus has been achieved concerning their functional-structural relationships. In this work, we present a comprehensive structural and functional study with the MjTX-II, a dimeric Lys49-PLA2 from Bothrops moojeni venom which includes: (i) high-resolution crystal structure; (ii) dynamic light scattering and bioinformatics studies in order to confirm its biological assembly; (iii) myographic and electrophysiological studies and, (iv) comparative studies with other Lys49-PLA2s. These comparative analyses let us to get important insights into the role of Lys122 amino acid, previously indicated as responsible for Lys49-PLA2s catalytic inactivity and added important elements to establish the correct biological assembly for this class of proteins. Furthermore, we show two unique sequential features of MjTX-II (an amino acid insertion and a mutation) in comparison to all bothropic Lys49-PLA2s that lead to a distinct way of ligand binding at the toxin's hydrophobic channel and also, allowed the presence of an additional ligand molecule in this region. These facts suggest a possible particular mode of binding for long-chain ligands that interacts with MjTX-II hydrophobic channel, a feature that may directly affect the design of structure-based ligands for Lys49-PLA2s. © 2013 Elsevier Ltd.Depto. de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPDepto. de Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPCentro de Estudos de Biomoléculas Aplicadas à Saúde, CEBio Fundação Oswaldo Cruz, FIOCRUZ RondÔnia e Departamento de Medicina Universidade Federal de RondÔnia, UNIR, Porto Velho, RODepto. de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPDepto. de Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPUniversidade Estadual Paulista (Unesp)Universidade Federal de Rondônia (UNIR)Salvador, Guilherme H.M. [UNESP]Cavalcante, Walter L.G. [UNESP]dos Santos, Juliana I. [UNESP]Gallacci, Márcia [UNESP]Soares, Andreimar M.Fontes, Marcos R.M. [UNESP]2014-05-27T11:30:41Z2014-05-27T11:30:41Z2013-09-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article52-63application/pdfhttp://dx.doi.org/10.1016/j.toxicon.2013.06.013Toxicon, v. 72, p. 52-63.0041-01011879-3150http://hdl.handle.net/11449/7656210.1016/j.toxicon.2013.06.013WOS:0003238575000082-s2.0-848802621602-s2.0-84880262160.pdf9353490382598257Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengToxicon2.3520,692info:eu-repo/semantics/openAccess2023-11-29T06:17:02Zoai:repositorio.unesp.br:11449/76562Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:05:13.947443Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like |
title |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like |
spellingShingle |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like Salvador, Guilherme H.M. [UNESP] Bothrops moojeni venom Lys49-phospholipase A2 Myographic studies Oligomeric assembly X-ray crystallography amino acid myotoxin 2 phospholipase A2 snake venom unclassified drug animal experiment animal tissue bioinformatics Bothrops bothrops moojeni catalysis controlled study crystal structure crystallization electrophysiology hydrophobicity ligand binding light scattering male mouse myography nonhuman priority journal protein function X ray diffraction |
title_short |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like |
title_full |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like |
title_fullStr |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like |
title_full_unstemmed |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like |
title_sort |
Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like |
author |
Salvador, Guilherme H.M. [UNESP] |
author_facet |
Salvador, Guilherme H.M. [UNESP] Cavalcante, Walter L.G. [UNESP] dos Santos, Juliana I. [UNESP] Gallacci, Márcia [UNESP] Soares, Andreimar M. Fontes, Marcos R.M. [UNESP] |
author_role |
author |
author2 |
Cavalcante, Walter L.G. [UNESP] dos Santos, Juliana I. [UNESP] Gallacci, Márcia [UNESP] Soares, Andreimar M. Fontes, Marcos R.M. [UNESP] |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Universidade Federal de Rondônia (UNIR) |
dc.contributor.author.fl_str_mv |
Salvador, Guilherme H.M. [UNESP] Cavalcante, Walter L.G. [UNESP] dos Santos, Juliana I. [UNESP] Gallacci, Márcia [UNESP] Soares, Andreimar M. Fontes, Marcos R.M. [UNESP] |
dc.subject.por.fl_str_mv |
Bothrops moojeni venom Lys49-phospholipase A2 Myographic studies Oligomeric assembly X-ray crystallography amino acid myotoxin 2 phospholipase A2 snake venom unclassified drug animal experiment animal tissue bioinformatics Bothrops bothrops moojeni catalysis controlled study crystal structure crystallization electrophysiology hydrophobicity ligand binding light scattering male mouse myography nonhuman priority journal protein function X ray diffraction |
topic |
Bothrops moojeni venom Lys49-phospholipase A2 Myographic studies Oligomeric assembly X-ray crystallography amino acid myotoxin 2 phospholipase A2 snake venom unclassified drug animal experiment animal tissue bioinformatics Bothrops bothrops moojeni catalysis controlled study crystal structure crystallization electrophysiology hydrophobicity ligand binding light scattering male mouse myography nonhuman priority journal protein function X ray diffraction |
description |
Lys49-phospholipases A2 (Lys49-PLA2s) are proteins found in bothropic snake venoms (Viperidae family) and belong to a class of proteins which presents a phospholipase A2 scaffold but are catalytically inactive. These proteins (also known as PLA2s-like toxins) exert a pronounced local myotoxic effect and are not neutralized by antivenom, being their study relevant in terms of medical and scientific interest. Despite of the several studies reported in the literature for this class of proteins only a partial consensus has been achieved concerning their functional-structural relationships. In this work, we present a comprehensive structural and functional study with the MjTX-II, a dimeric Lys49-PLA2 from Bothrops moojeni venom which includes: (i) high-resolution crystal structure; (ii) dynamic light scattering and bioinformatics studies in order to confirm its biological assembly; (iii) myographic and electrophysiological studies and, (iv) comparative studies with other Lys49-PLA2s. These comparative analyses let us to get important insights into the role of Lys122 amino acid, previously indicated as responsible for Lys49-PLA2s catalytic inactivity and added important elements to establish the correct biological assembly for this class of proteins. Furthermore, we show two unique sequential features of MjTX-II (an amino acid insertion and a mutation) in comparison to all bothropic Lys49-PLA2s that lead to a distinct way of ligand binding at the toxin's hydrophobic channel and also, allowed the presence of an additional ligand molecule in this region. These facts suggest a possible particular mode of binding for long-chain ligands that interacts with MjTX-II hydrophobic channel, a feature that may directly affect the design of structure-based ligands for Lys49-PLA2s. © 2013 Elsevier Ltd. |
publishDate |
2013 |
dc.date.none.fl_str_mv |
2013-09-15 2014-05-27T11:30:41Z 2014-05-27T11:30:41Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.toxicon.2013.06.013 Toxicon, v. 72, p. 52-63. 0041-0101 1879-3150 http://hdl.handle.net/11449/76562 10.1016/j.toxicon.2013.06.013 WOS:000323857500008 2-s2.0-84880262160 2-s2.0-84880262160.pdf 9353490382598257 |
url |
http://dx.doi.org/10.1016/j.toxicon.2013.06.013 http://hdl.handle.net/11449/76562 |
identifier_str_mv |
Toxicon, v. 72, p. 52-63. 0041-0101 1879-3150 10.1016/j.toxicon.2013.06.013 WOS:000323857500008 2-s2.0-84880262160 2-s2.0-84880262160.pdf 9353490382598257 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Toxicon 2.352 0,692 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
52-63 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
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1808129017762545664 |