Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like

Detalhes bibliográficos
Autor(a) principal: Salvador, Guilherme H.M. [UNESP]
Data de Publicação: 2013
Outros Autores: Cavalcante, Walter L.G. [UNESP], dos Santos, Juliana I. [UNESP], Gallacci, Márcia [UNESP], Soares, Andreimar M., Fontes, Marcos R.M. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.toxicon.2013.06.013
http://hdl.handle.net/11449/76562
Resumo: Lys49-phospholipases A2 (Lys49-PLA2s) are proteins found in bothropic snake venoms (Viperidae family) and belong to a class of proteins which presents a phospholipase A2 scaffold but are catalytically inactive. These proteins (also known as PLA2s-like toxins) exert a pronounced local myotoxic effect and are not neutralized by antivenom, being their study relevant in terms of medical and scientific interest. Despite of the several studies reported in the literature for this class of proteins only a partial consensus has been achieved concerning their functional-structural relationships. In this work, we present a comprehensive structural and functional study with the MjTX-II, a dimeric Lys49-PLA2 from Bothrops moojeni venom which includes: (i) high-resolution crystal structure; (ii) dynamic light scattering and bioinformatics studies in order to confirm its biological assembly; (iii) myographic and electrophysiological studies and, (iv) comparative studies with other Lys49-PLA2s. These comparative analyses let us to get important insights into the role of Lys122 amino acid, previously indicated as responsible for Lys49-PLA2s catalytic inactivity and added important elements to establish the correct biological assembly for this class of proteins. Furthermore, we show two unique sequential features of MjTX-II (an amino acid insertion and a mutation) in comparison to all bothropic Lys49-PLA2s that lead to a distinct way of ligand binding at the toxin's hydrophobic channel and also, allowed the presence of an additional ligand molecule in this region. These facts suggest a possible particular mode of binding for long-chain ligands that interacts with MjTX-II hydrophobic channel, a feature that may directly affect the design of structure-based ligands for Lys49-PLA2s. © 2013 Elsevier Ltd.
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spelling Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-likeBothrops moojeni venomLys49-phospholipase A2Myographic studiesOligomeric assemblyX-ray crystallographyamino acidmyotoxin 2phospholipase A2snake venomunclassified druganimal experimentanimal tissuebioinformaticsBothropsbothrops moojenicatalysiscontrolled studycrystal structurecrystallizationelectrophysiologyhydrophobicityligand bindinglight scatteringmalemousemyographynonhumanpriority journalprotein functionX ray diffractionLys49-phospholipases A2 (Lys49-PLA2s) are proteins found in bothropic snake venoms (Viperidae family) and belong to a class of proteins which presents a phospholipase A2 scaffold but are catalytically inactive. These proteins (also known as PLA2s-like toxins) exert a pronounced local myotoxic effect and are not neutralized by antivenom, being their study relevant in terms of medical and scientific interest. Despite of the several studies reported in the literature for this class of proteins only a partial consensus has been achieved concerning their functional-structural relationships. In this work, we present a comprehensive structural and functional study with the MjTX-II, a dimeric Lys49-PLA2 from Bothrops moojeni venom which includes: (i) high-resolution crystal structure; (ii) dynamic light scattering and bioinformatics studies in order to confirm its biological assembly; (iii) myographic and electrophysiological studies and, (iv) comparative studies with other Lys49-PLA2s. These comparative analyses let us to get important insights into the role of Lys122 amino acid, previously indicated as responsible for Lys49-PLA2s catalytic inactivity and added important elements to establish the correct biological assembly for this class of proteins. Furthermore, we show two unique sequential features of MjTX-II (an amino acid insertion and a mutation) in comparison to all bothropic Lys49-PLA2s that lead to a distinct way of ligand binding at the toxin's hydrophobic channel and also, allowed the presence of an additional ligand molecule in this region. These facts suggest a possible particular mode of binding for long-chain ligands that interacts with MjTX-II hydrophobic channel, a feature that may directly affect the design of structure-based ligands for Lys49-PLA2s. © 2013 Elsevier Ltd.Depto. de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPDepto. de Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPCentro de Estudos de Biomoléculas Aplicadas à Saúde, CEBio Fundação Oswaldo Cruz, FIOCRUZ RondÔnia e Departamento de Medicina Universidade Federal de RondÔnia, UNIR, Porto Velho, RODepto. de Física e Biofísica Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPDepto. de Farmacologia Instituto de Biociências Universidade Estadual Paulista (UNESP), Botucatu, SPUniversidade Estadual Paulista (Unesp)Universidade Federal de Rondônia (UNIR)Salvador, Guilherme H.M. [UNESP]Cavalcante, Walter L.G. [UNESP]dos Santos, Juliana I. [UNESP]Gallacci, Márcia [UNESP]Soares, Andreimar M.Fontes, Marcos R.M. [UNESP]2014-05-27T11:30:41Z2014-05-27T11:30:41Z2013-09-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article52-63application/pdfhttp://dx.doi.org/10.1016/j.toxicon.2013.06.013Toxicon, v. 72, p. 52-63.0041-01011879-3150http://hdl.handle.net/11449/7656210.1016/j.toxicon.2013.06.013WOS:0003238575000082-s2.0-848802621602-s2.0-84880262160.pdf9353490382598257Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengToxicon2.3520,692info:eu-repo/semantics/openAccess2023-11-29T06:17:02Zoai:repositorio.unesp.br:11449/76562Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-11-29T06:17:02Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
title Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
spellingShingle Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
Salvador, Guilherme H.M. [UNESP]
Bothrops moojeni venom
Lys49-phospholipase A2
Myographic studies
Oligomeric assembly
X-ray crystallography
amino acid
myotoxin 2
phospholipase A2
snake venom
unclassified drug
animal experiment
animal tissue
bioinformatics
Bothrops
bothrops moojeni
catalysis
controlled study
crystal structure
crystallization
electrophysiology
hydrophobicity
ligand binding
light scattering
male
mouse
myography
nonhuman
priority journal
protein function
X ray diffraction
title_short Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
title_full Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
title_fullStr Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
title_full_unstemmed Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
title_sort Structural and functional studies with mytoxin II from Bothrops moojeni reveal remarkable similarities and differences compared to other catalytically inactive phospholipases A2-like
author Salvador, Guilherme H.M. [UNESP]
author_facet Salvador, Guilherme H.M. [UNESP]
Cavalcante, Walter L.G. [UNESP]
dos Santos, Juliana I. [UNESP]
Gallacci, Márcia [UNESP]
Soares, Andreimar M.
Fontes, Marcos R.M. [UNESP]
author_role author
author2 Cavalcante, Walter L.G. [UNESP]
dos Santos, Juliana I. [UNESP]
Gallacci, Márcia [UNESP]
Soares, Andreimar M.
Fontes, Marcos R.M. [UNESP]
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Universidade Federal de Rondônia (UNIR)
dc.contributor.author.fl_str_mv Salvador, Guilherme H.M. [UNESP]
Cavalcante, Walter L.G. [UNESP]
dos Santos, Juliana I. [UNESP]
Gallacci, Márcia [UNESP]
Soares, Andreimar M.
Fontes, Marcos R.M. [UNESP]
dc.subject.por.fl_str_mv Bothrops moojeni venom
Lys49-phospholipase A2
Myographic studies
Oligomeric assembly
X-ray crystallography
amino acid
myotoxin 2
phospholipase A2
snake venom
unclassified drug
animal experiment
animal tissue
bioinformatics
Bothrops
bothrops moojeni
catalysis
controlled study
crystal structure
crystallization
electrophysiology
hydrophobicity
ligand binding
light scattering
male
mouse
myography
nonhuman
priority journal
protein function
X ray diffraction
topic Bothrops moojeni venom
Lys49-phospholipase A2
Myographic studies
Oligomeric assembly
X-ray crystallography
amino acid
myotoxin 2
phospholipase A2
snake venom
unclassified drug
animal experiment
animal tissue
bioinformatics
Bothrops
bothrops moojeni
catalysis
controlled study
crystal structure
crystallization
electrophysiology
hydrophobicity
ligand binding
light scattering
male
mouse
myography
nonhuman
priority journal
protein function
X ray diffraction
description Lys49-phospholipases A2 (Lys49-PLA2s) are proteins found in bothropic snake venoms (Viperidae family) and belong to a class of proteins which presents a phospholipase A2 scaffold but are catalytically inactive. These proteins (also known as PLA2s-like toxins) exert a pronounced local myotoxic effect and are not neutralized by antivenom, being their study relevant in terms of medical and scientific interest. Despite of the several studies reported in the literature for this class of proteins only a partial consensus has been achieved concerning their functional-structural relationships. In this work, we present a comprehensive structural and functional study with the MjTX-II, a dimeric Lys49-PLA2 from Bothrops moojeni venom which includes: (i) high-resolution crystal structure; (ii) dynamic light scattering and bioinformatics studies in order to confirm its biological assembly; (iii) myographic and electrophysiological studies and, (iv) comparative studies with other Lys49-PLA2s. These comparative analyses let us to get important insights into the role of Lys122 amino acid, previously indicated as responsible for Lys49-PLA2s catalytic inactivity and added important elements to establish the correct biological assembly for this class of proteins. Furthermore, we show two unique sequential features of MjTX-II (an amino acid insertion and a mutation) in comparison to all bothropic Lys49-PLA2s that lead to a distinct way of ligand binding at the toxin's hydrophobic channel and also, allowed the presence of an additional ligand molecule in this region. These facts suggest a possible particular mode of binding for long-chain ligands that interacts with MjTX-II hydrophobic channel, a feature that may directly affect the design of structure-based ligands for Lys49-PLA2s. © 2013 Elsevier Ltd.
publishDate 2013
dc.date.none.fl_str_mv 2013-09-15
2014-05-27T11:30:41Z
2014-05-27T11:30:41Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.toxicon.2013.06.013
Toxicon, v. 72, p. 52-63.
0041-0101
1879-3150
http://hdl.handle.net/11449/76562
10.1016/j.toxicon.2013.06.013
WOS:000323857500008
2-s2.0-84880262160
2-s2.0-84880262160.pdf
9353490382598257
url http://dx.doi.org/10.1016/j.toxicon.2013.06.013
http://hdl.handle.net/11449/76562
identifier_str_mv Toxicon, v. 72, p. 52-63.
0041-0101
1879-3150
10.1016/j.toxicon.2013.06.013
WOS:000323857500008
2-s2.0-84880262160
2-s2.0-84880262160.pdf
9353490382598257
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Toxicon
2.352
0,692
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 52-63
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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