Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil

Detalhes bibliográficos
Autor(a) principal: Chakraborty, S.
Data de Publicação: 2002
Outros Autores: Fernandes, C. D. [UNESP], Charchar, M. J. D., Thomas, M. R.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1094/PHYTO.2002.92.5.553
http://hdl.handle.net/11449/31345
Resumo: Pathogenic variation in Colletotrichum gloeosporioides infecting species of the tropical pasture legume Stylosanthes at its center of diversity was determined from 296 isolates collected from wild host population and selected germ plasm of S. capitata, S. guianensis, S. scabra, and S. macrocephala in Brazil. A putative host differential set comprising 11 accessions was selected from a bioassay of 18 isolates on 19 host accessions using principal component analysis. A similar analysis of anthracnose severity data for a subset of 195 isolates on the 11 differentials indicated that an adequate summary of pathogenic variation could be obtained using only five of these differentials. of the five differentials, S. seabrana 'Primar' was resistant and S. scabra 'Fitzroy' was susceptible to most isolates. A cluster analysis was used to determine eight natural race clusters using the 195 isolates. Linear discriminant functions were developed for eight race clusters using the 195 isolates as the training data set, and these were applied to classify a test data set of the remaining 101 isolates. All except 11 isolates of the test data set were classified into one of the eight race clusters. Over 10% of the 296 isolates were weakly pathogenic to all five differentials and another 40% were virulent on just one differential. The unclassified isolates represent six new races with unique virulence combinations, of which one isolate is virulent on all five differentials. The majority of isolates came from six field sites, and Shannon's index of diversity indicated considerable variation between sites. Pathogenic diversity was extensive at three sites where selected germ plasm were under evaluation, and complex race clusters and unclassified isolates representing new races were more prevalent at these sites compared with sites containing wild Stylosanthes populations.
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spelling Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazilgeographical distributionpathogen diversityrace compositionvirulence analysisPathogenic variation in Colletotrichum gloeosporioides infecting species of the tropical pasture legume Stylosanthes at its center of diversity was determined from 296 isolates collected from wild host population and selected germ plasm of S. capitata, S. guianensis, S. scabra, and S. macrocephala in Brazil. A putative host differential set comprising 11 accessions was selected from a bioassay of 18 isolates on 19 host accessions using principal component analysis. A similar analysis of anthracnose severity data for a subset of 195 isolates on the 11 differentials indicated that an adequate summary of pathogenic variation could be obtained using only five of these differentials. of the five differentials, S. seabrana 'Primar' was resistant and S. scabra 'Fitzroy' was susceptible to most isolates. A cluster analysis was used to determine eight natural race clusters using the 195 isolates. Linear discriminant functions were developed for eight race clusters using the 195 isolates as the training data set, and these were applied to classify a test data set of the remaining 101 isolates. All except 11 isolates of the test data set were classified into one of the eight race clusters. Over 10% of the 296 isolates were weakly pathogenic to all five differentials and another 40% were virulent on just one differential. The unclassified isolates represent six new races with unique virulence combinations, of which one isolate is virulent on all five differentials. The majority of isolates came from six field sites, and Shannon's index of diversity indicated considerable variation between sites. Pathogenic diversity was extensive at three sites where selected germ plasm were under evaluation, and complex race clusters and unclassified isolates representing new races were more prevalent at these sites compared with sites containing wild Stylosanthes populations.CSIRO, Long Pocket Labs, Indooroopilly, Qld, AustraliaUniv Queensland, CRCTPP, Brisbane, Qld 4072, AustraliaUniv Estadual Paulista Julio Mesquita Filho, FCA, EMBRAPA, CNPGC, BR-18609490 Botucatu, SP, BrazilEMBRAPA, CPAC, BR-73301970 Planaltina, DF, BrazilCSIRO, Cleveland, Qld 4163, AustraliaUniv Estadual Paulista Julio Mesquita Filho, FCA, EMBRAPA, CNPGC, BR-18609490 Botucatu, SP, BrazilAmer Phytopathological SocCSIROUniv QueenslandUniversidade Estadual Paulista (Unesp)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Chakraborty, S.Fernandes, C. D. [UNESP]Charchar, M. J. D.Thomas, M. R.2014-05-20T15:19:58Z2014-05-20T15:19:58Z2002-05-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article553-562http://dx.doi.org/10.1094/PHYTO.2002.92.5.553Phytopathology. St Paul: Amer Phytopathological Soc, v. 92, n. 5, p. 553-562, 2002.0031-949Xhttp://hdl.handle.net/11449/3134510.1094/PHYTO.2002.92.5.553WOS:000175140800013Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPhytopathology3.036info:eu-repo/semantics/openAccess2021-10-22T18:33:53Zoai:repositorio.unesp.br:11449/31345Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-22T18:33:53Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
title Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
spellingShingle Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
Chakraborty, S.
geographical distribution
pathogen diversity
race composition
virulence analysis
title_short Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
title_full Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
title_fullStr Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
title_full_unstemmed Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
title_sort Pathogenic variation in Colletotrichum gloeosporioides infecting Stylosanthes spp. in a center of diversity in Brazil
author Chakraborty, S.
author_facet Chakraborty, S.
Fernandes, C. D. [UNESP]
Charchar, M. J. D.
Thomas, M. R.
author_role author
author2 Fernandes, C. D. [UNESP]
Charchar, M. J. D.
Thomas, M. R.
author2_role author
author
author
dc.contributor.none.fl_str_mv CSIRO
Univ Queensland
Universidade Estadual Paulista (Unesp)
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
dc.contributor.author.fl_str_mv Chakraborty, S.
Fernandes, C. D. [UNESP]
Charchar, M. J. D.
Thomas, M. R.
dc.subject.por.fl_str_mv geographical distribution
pathogen diversity
race composition
virulence analysis
topic geographical distribution
pathogen diversity
race composition
virulence analysis
description Pathogenic variation in Colletotrichum gloeosporioides infecting species of the tropical pasture legume Stylosanthes at its center of diversity was determined from 296 isolates collected from wild host population and selected germ plasm of S. capitata, S. guianensis, S. scabra, and S. macrocephala in Brazil. A putative host differential set comprising 11 accessions was selected from a bioassay of 18 isolates on 19 host accessions using principal component analysis. A similar analysis of anthracnose severity data for a subset of 195 isolates on the 11 differentials indicated that an adequate summary of pathogenic variation could be obtained using only five of these differentials. of the five differentials, S. seabrana 'Primar' was resistant and S. scabra 'Fitzroy' was susceptible to most isolates. A cluster analysis was used to determine eight natural race clusters using the 195 isolates. Linear discriminant functions were developed for eight race clusters using the 195 isolates as the training data set, and these were applied to classify a test data set of the remaining 101 isolates. All except 11 isolates of the test data set were classified into one of the eight race clusters. Over 10% of the 296 isolates were weakly pathogenic to all five differentials and another 40% were virulent on just one differential. The unclassified isolates represent six new races with unique virulence combinations, of which one isolate is virulent on all five differentials. The majority of isolates came from six field sites, and Shannon's index of diversity indicated considerable variation between sites. Pathogenic diversity was extensive at three sites where selected germ plasm were under evaluation, and complex race clusters and unclassified isolates representing new races were more prevalent at these sites compared with sites containing wild Stylosanthes populations.
publishDate 2002
dc.date.none.fl_str_mv 2002-05-01
2014-05-20T15:19:58Z
2014-05-20T15:19:58Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1094/PHYTO.2002.92.5.553
Phytopathology. St Paul: Amer Phytopathological Soc, v. 92, n. 5, p. 553-562, 2002.
0031-949X
http://hdl.handle.net/11449/31345
10.1094/PHYTO.2002.92.5.553
WOS:000175140800013
url http://dx.doi.org/10.1094/PHYTO.2002.92.5.553
http://hdl.handle.net/11449/31345
identifier_str_mv Phytopathology. St Paul: Amer Phytopathological Soc, v. 92, n. 5, p. 553-562, 2002.
0031-949X
10.1094/PHYTO.2002.92.5.553
WOS:000175140800013
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Phytopathology
3.036
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 553-562
dc.publisher.none.fl_str_mv Amer Phytopathological Soc
publisher.none.fl_str_mv Amer Phytopathological Soc
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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