Genetic diversity of Brazilian Brahman cattle by pedigree analysis

Detalhes bibliográficos
Autor(a) principal: Cavani, Ligia [UNESP]
Data de Publicação: 2018
Outros Autores: Silva, Rafael Medeiros de Oliveira [UNESP], Carreño, Luis Orlando Duitama [UNESP], Ono, Rafael Keith [UNESP], Bertipaglia, Tássia Souza [UNESP], Farah, Michel Marques [UNESP], Millen, Danilo Domingues [UNESP], da Fonseca, Ricardo [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/S0100-204X2018000100008
http://hdl.handle.net/11449/179616
Resumo: The objective of this work was to evaluate the genetic diversity of Brahman cattle in Brazil with pedigree analysis. Genealogical records of a subpopulation were used considering all pedigree information (Pt) and the pedigree information divided into two periods (P1, from 1994 to 2004; and P2, from 2005 to 2012) or according to the raising system (Ppt, animals on pasture; or Pst, on stable). Estimates were obtained for average inbreeding coefficients, generation intervals (GI), number of equivalent known generation (CGE), number of founders (Nf), effective number of founders (fe), effective number of ancestors (fa), and founder genome equivalents (fg). The average inbreeding coefficients were 11.97, 7.79, 11.95, 11.74, and 11.31% for Pt, P1, P2, Ppt, and Pst, respectively. Average GI was 4.4 years, whereas CGE was 3.18. The fe values were similar to those of fa, which were greater than those of fg. The fe/fa and fg/fe ratios were close to 1, which indicates no genetic bottleneck and small losses by genetic drift. The genetic diversity in the Brazilian population of Brahman breed is not significantly reduced.
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spelling Genetic diversity of Brazilian Brahman cattle by pedigree analysisBeef cattleFoundersGenetic bottleneckInbreedingThe objective of this work was to evaluate the genetic diversity of Brahman cattle in Brazil with pedigree analysis. Genealogical records of a subpopulation were used considering all pedigree information (Pt) and the pedigree information divided into two periods (P1, from 1994 to 2004; and P2, from 2005 to 2012) or according to the raising system (Ppt, animals on pasture; or Pst, on stable). Estimates were obtained for average inbreeding coefficients, generation intervals (GI), number of equivalent known generation (CGE), number of founders (Nf), effective number of founders (fe), effective number of ancestors (fa), and founder genome equivalents (fg). The average inbreeding coefficients were 11.97, 7.79, 11.95, 11.74, and 11.31% for Pt, P1, P2, Ppt, and Pst, respectively. Average GI was 4.4 years, whereas CGE was 3.18. The fe values were similar to those of fa, which were greater than those of fg. The fe/fa and fg/fe ratios were close to 1, which indicates no genetic bottleneck and small losses by genetic drift. The genetic diversity in the Brazilian population of Brahman breed is not significantly reduced.Universidade Estadual Paulista (Unesp), Rodovia Comandante João Ribeiro de Barros, Km 651Unesp, Via de Acesso Professor Paulo Donato Castellane, s/noUniversidade Estadual Paulista (Unesp), Rodovia Comandante João Ribeiro de Barros, Km 651Unesp, Via de Acesso Professor Paulo Donato Castellane, s/noUniversidade Estadual Paulista (Unesp)Cavani, Ligia [UNESP]Silva, Rafael Medeiros de Oliveira [UNESP]Carreño, Luis Orlando Duitama [UNESP]Ono, Rafael Keith [UNESP]Bertipaglia, Tássia Souza [UNESP]Farah, Michel Marques [UNESP]Millen, Danilo Domingues [UNESP]da Fonseca, Ricardo [UNESP]2018-12-11T17:36:02Z2018-12-11T17:36:02Z2018-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article74-79application/pdfhttp://dx.doi.org/10.1590/S0100-204X2018000100008Pesquisa Agropecuaria Brasileira, v. 53, n. 1, p. 74-79, 2018.1678-39210100-204Xhttp://hdl.handle.net/11449/17961610.1590/S0100-204X2018000100008S0100-204X20180001000742-s2.0-85042583212S0100-204X2018000100074.pdf03083523735455580000-0002-1163-6296Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengPesquisa Agropecuaria Brasileira0,469info:eu-repo/semantics/openAccess2024-05-07T13:47:23Zoai:repositorio.unesp.br:11449/179616Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:26:48.235961Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Genetic diversity of Brazilian Brahman cattle by pedigree analysis
title Genetic diversity of Brazilian Brahman cattle by pedigree analysis
spellingShingle Genetic diversity of Brazilian Brahman cattle by pedigree analysis
Cavani, Ligia [UNESP]
Beef cattle
Founders
Genetic bottleneck
Inbreeding
title_short Genetic diversity of Brazilian Brahman cattle by pedigree analysis
title_full Genetic diversity of Brazilian Brahman cattle by pedigree analysis
title_fullStr Genetic diversity of Brazilian Brahman cattle by pedigree analysis
title_full_unstemmed Genetic diversity of Brazilian Brahman cattle by pedigree analysis
title_sort Genetic diversity of Brazilian Brahman cattle by pedigree analysis
author Cavani, Ligia [UNESP]
author_facet Cavani, Ligia [UNESP]
Silva, Rafael Medeiros de Oliveira [UNESP]
Carreño, Luis Orlando Duitama [UNESP]
Ono, Rafael Keith [UNESP]
Bertipaglia, Tássia Souza [UNESP]
Farah, Michel Marques [UNESP]
Millen, Danilo Domingues [UNESP]
da Fonseca, Ricardo [UNESP]
author_role author
author2 Silva, Rafael Medeiros de Oliveira [UNESP]
Carreño, Luis Orlando Duitama [UNESP]
Ono, Rafael Keith [UNESP]
Bertipaglia, Tássia Souza [UNESP]
Farah, Michel Marques [UNESP]
Millen, Danilo Domingues [UNESP]
da Fonseca, Ricardo [UNESP]
author2_role author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Cavani, Ligia [UNESP]
Silva, Rafael Medeiros de Oliveira [UNESP]
Carreño, Luis Orlando Duitama [UNESP]
Ono, Rafael Keith [UNESP]
Bertipaglia, Tássia Souza [UNESP]
Farah, Michel Marques [UNESP]
Millen, Danilo Domingues [UNESP]
da Fonseca, Ricardo [UNESP]
dc.subject.por.fl_str_mv Beef cattle
Founders
Genetic bottleneck
Inbreeding
topic Beef cattle
Founders
Genetic bottleneck
Inbreeding
description The objective of this work was to evaluate the genetic diversity of Brahman cattle in Brazil with pedigree analysis. Genealogical records of a subpopulation were used considering all pedigree information (Pt) and the pedigree information divided into two periods (P1, from 1994 to 2004; and P2, from 2005 to 2012) or according to the raising system (Ppt, animals on pasture; or Pst, on stable). Estimates were obtained for average inbreeding coefficients, generation intervals (GI), number of equivalent known generation (CGE), number of founders (Nf), effective number of founders (fe), effective number of ancestors (fa), and founder genome equivalents (fg). The average inbreeding coefficients were 11.97, 7.79, 11.95, 11.74, and 11.31% for Pt, P1, P2, Ppt, and Pst, respectively. Average GI was 4.4 years, whereas CGE was 3.18. The fe values were similar to those of fa, which were greater than those of fg. The fe/fa and fg/fe ratios were close to 1, which indicates no genetic bottleneck and small losses by genetic drift. The genetic diversity in the Brazilian population of Brahman breed is not significantly reduced.
publishDate 2018
dc.date.none.fl_str_mv 2018-12-11T17:36:02Z
2018-12-11T17:36:02Z
2018-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S0100-204X2018000100008
Pesquisa Agropecuaria Brasileira, v. 53, n. 1, p. 74-79, 2018.
1678-3921
0100-204X
http://hdl.handle.net/11449/179616
10.1590/S0100-204X2018000100008
S0100-204X2018000100074
2-s2.0-85042583212
S0100-204X2018000100074.pdf
0308352373545558
0000-0002-1163-6296
url http://dx.doi.org/10.1590/S0100-204X2018000100008
http://hdl.handle.net/11449/179616
identifier_str_mv Pesquisa Agropecuaria Brasileira, v. 53, n. 1, p. 74-79, 2018.
1678-3921
0100-204X
10.1590/S0100-204X2018000100008
S0100-204X2018000100074
2-s2.0-85042583212
S0100-204X2018000100074.pdf
0308352373545558
0000-0002-1163-6296
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Pesquisa Agropecuaria Brasileira
0,469
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 74-79
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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