Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.3390/jof7010054 http://hdl.handle.net/11449/207177 |
Resumo: | Paracoccidioidomycosis is an endemic fungal disease to Latin America caused by at least five species-level genotypes of Paracoccidioides, named P. lutzii, P. brasiliensis (S1a and S1b populations), P. americana, P. restrepiensis, and P. venezuelensis. In this manuscript, we report on Paracoccidioides sp. sampling efforts in armadillos from two different areas in Brazil. We sequenced the genomes of seven Paracoccidioides isolates and used phylogenomics and populations genetics for genotyping. We found that P. brasiliensis and P. lutzii are both present in the Amazon region. Additionally, we identified two Paracoccidioides isolates that seem to be the result of admixture between divergent populations within P. brasiliensis sensu stricto. Both of these isolates were recovered from armadillos in a P. lutzii endemic area in Midwestern Brazil. Additionally, two isolates from human patients also show evidence of resulting from admixture. Our results suggest that the populations of P. brasiliensis sensu stricto exchange genes in nature. More generally, they suggest that population structure and admixture within species is an important source of variation for pathogenic fungi. |
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Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basinAdmixtureAmazonArmadillosParacoccidioidesParacoccidioidomycosisParacoccidioidomycosis is an endemic fungal disease to Latin America caused by at least five species-level genotypes of Paracoccidioides, named P. lutzii, P. brasiliensis (S1a and S1b populations), P. americana, P. restrepiensis, and P. venezuelensis. In this manuscript, we report on Paracoccidioides sp. sampling efforts in armadillos from two different areas in Brazil. We sequenced the genomes of seven Paracoccidioides isolates and used phylogenomics and populations genetics for genotyping. We found that P. brasiliensis and P. lutzii are both present in the Amazon region. Additionally, we identified two Paracoccidioides isolates that seem to be the result of admixture between divergent populations within P. brasiliensis sensu stricto. Both of these isolates were recovered from armadillos in a P. lutzii endemic area in Midwestern Brazil. Additionally, two isolates from human patients also show evidence of resulting from admixture. Our results suggest that the populations of P. brasiliensis sensu stricto exchange genes in nature. More generally, they suggest that population structure and admixture within species is an important source of variation for pathogenic fungi.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)National Institute of Allergy and Infectious DiseasesNational Institutes of HealthNational Institute of General Medical SciencesDepartamento de Microbiologia e Imunologia Instituto de Biociências de Botucatu Universidade Estadual Paulista/UNESPDepartment of Biology University of North CarolinaFaculdade de Medicina Universidade de Brasília, DFFaculdade de Ciências Biológicas e Agrárias Universidade do Estado de Mato Grosso, Campus de Alta FlorestaPathogen and Microbiome Institute Northern Arizona UniversityDepartamento de Microbiologia e Imunologia Instituto de Biociências de Botucatu Universidade Estadual Paulista/UNESPFAPESP: 2018/06390-9CNPq: 460999/2014-1National Institute of Allergy and Infectious Diseases: ADHS16-162415National Institutes of Health: ADHS16-162415National Institute of Allergy and Infectious Diseases: ADHS17-0007403National Institutes of Health: ADHS17-0007403National Institute of General Medical Sciences: R01GM121750National Institutes of Health: R01GM121750National Institute of Allergy and Infectious Diseases: R21AI28536National Institutes of Health: R21AI28536Universidade Estadual Paulista (Unesp)University of North CarolinaUniversidade de Brasília (UnB)Universidade do Estado de Mato GrossoNorthern Arizona UniversityBagagli, Eduardo [UNESP]Matute, Daniel RicardoGarces, Hans Garcia [UNESP]Tenório, Bernardo GuerraGarces, Adalberto Garcia [UNESP]Alves, Lucas Gomes de BritoYamauchi, Danielle Hamae [UNESP]Hrycyk, Marluce FranciscaBarker, Bridget MarieTeixeira, Marcus de Melo2021-06-25T10:50:15Z2021-06-25T10:50:15Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-11http://dx.doi.org/10.3390/jof7010054Journal of Fungi, v. 7, n. 1, p. 1-11, 2021.2309-608Xhttp://hdl.handle.net/11449/20717710.3390/jof70100542-s2.0-85099845653Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Fungiinfo:eu-repo/semantics/openAccess2021-10-23T16:22:57Zoai:repositorio.unesp.br:11449/207177Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:31:10.404013Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin |
title |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin |
spellingShingle |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin Bagagli, Eduardo [UNESP] Admixture Amazon Armadillos Paracoccidioides Paracoccidioidomycosis |
title_short |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin |
title_full |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin |
title_fullStr |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin |
title_full_unstemmed |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin |
title_sort |
Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin |
author |
Bagagli, Eduardo [UNESP] |
author_facet |
Bagagli, Eduardo [UNESP] Matute, Daniel Ricardo Garces, Hans Garcia [UNESP] Tenório, Bernardo Guerra Garces, Adalberto Garcia [UNESP] Alves, Lucas Gomes de Brito Yamauchi, Danielle Hamae [UNESP] Hrycyk, Marluce Francisca Barker, Bridget Marie Teixeira, Marcus de Melo |
author_role |
author |
author2 |
Matute, Daniel Ricardo Garces, Hans Garcia [UNESP] Tenório, Bernardo Guerra Garces, Adalberto Garcia [UNESP] Alves, Lucas Gomes de Brito Yamauchi, Danielle Hamae [UNESP] Hrycyk, Marluce Francisca Barker, Bridget Marie Teixeira, Marcus de Melo |
author2_role |
author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) University of North Carolina Universidade de Brasília (UnB) Universidade do Estado de Mato Grosso Northern Arizona University |
dc.contributor.author.fl_str_mv |
Bagagli, Eduardo [UNESP] Matute, Daniel Ricardo Garces, Hans Garcia [UNESP] Tenório, Bernardo Guerra Garces, Adalberto Garcia [UNESP] Alves, Lucas Gomes de Brito Yamauchi, Danielle Hamae [UNESP] Hrycyk, Marluce Francisca Barker, Bridget Marie Teixeira, Marcus de Melo |
dc.subject.por.fl_str_mv |
Admixture Amazon Armadillos Paracoccidioides Paracoccidioidomycosis |
topic |
Admixture Amazon Armadillos Paracoccidioides Paracoccidioidomycosis |
description |
Paracoccidioidomycosis is an endemic fungal disease to Latin America caused by at least five species-level genotypes of Paracoccidioides, named P. lutzii, P. brasiliensis (S1a and S1b populations), P. americana, P. restrepiensis, and P. venezuelensis. In this manuscript, we report on Paracoccidioides sp. sampling efforts in armadillos from two different areas in Brazil. We sequenced the genomes of seven Paracoccidioides isolates and used phylogenomics and populations genetics for genotyping. We found that P. brasiliensis and P. lutzii are both present in the Amazon region. Additionally, we identified two Paracoccidioides isolates that seem to be the result of admixture between divergent populations within P. brasiliensis sensu stricto. Both of these isolates were recovered from armadillos in a P. lutzii endemic area in Midwestern Brazil. Additionally, two isolates from human patients also show evidence of resulting from admixture. Our results suggest that the populations of P. brasiliensis sensu stricto exchange genes in nature. More generally, they suggest that population structure and admixture within species is an important source of variation for pathogenic fungi. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06-25T10:50:15Z 2021-06-25T10:50:15Z 2021-01-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.3390/jof7010054 Journal of Fungi, v. 7, n. 1, p. 1-11, 2021. 2309-608X http://hdl.handle.net/11449/207177 10.3390/jof7010054 2-s2.0-85099845653 |
url |
http://dx.doi.org/10.3390/jof7010054 http://hdl.handle.net/11449/207177 |
identifier_str_mv |
Journal of Fungi, v. 7, n. 1, p. 1-11, 2021. 2309-608X 10.3390/jof7010054 2-s2.0-85099845653 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of Fungi |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
1-11 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
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UNESP |
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UNESP |
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Repositório Institucional da UNESP |
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Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808129080271306752 |