Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin

Detalhes bibliográficos
Autor(a) principal: Bagagli, Eduardo [UNESP]
Data de Publicação: 2021
Outros Autores: Matute, Daniel Ricardo, Garces, Hans Garcia [UNESP], Tenório, Bernardo Guerra, Garces, Adalberto Garcia [UNESP], Alves, Lucas Gomes de Brito, Yamauchi, Danielle Hamae [UNESP], Hrycyk, Marluce Francisca, Barker, Bridget Marie, Teixeira, Marcus de Melo
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3390/jof7010054
http://hdl.handle.net/11449/207177
Resumo: Paracoccidioidomycosis is an endemic fungal disease to Latin America caused by at least five species-level genotypes of Paracoccidioides, named P. lutzii, P. brasiliensis (S1a and S1b populations), P. americana, P. restrepiensis, and P. venezuelensis. In this manuscript, we report on Paracoccidioides sp. sampling efforts in armadillos from two different areas in Brazil. We sequenced the genomes of seven Paracoccidioides isolates and used phylogenomics and populations genetics for genotyping. We found that P. brasiliensis and P. lutzii are both present in the Amazon region. Additionally, we identified two Paracoccidioides isolates that seem to be the result of admixture between divergent populations within P. brasiliensis sensu stricto. Both of these isolates were recovered from armadillos in a P. lutzii endemic area in Midwestern Brazil. Additionally, two isolates from human patients also show evidence of resulting from admixture. Our results suggest that the populations of P. brasiliensis sensu stricto exchange genes in nature. More generally, they suggest that population structure and admixture within species is an important source of variation for pathogenic fungi.
id UNSP_99bbadf64635e99d11d087f45b143eb3
oai_identifier_str oai:repositorio.unesp.br:11449/207177
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basinAdmixtureAmazonArmadillosParacoccidioidesParacoccidioidomycosisParacoccidioidomycosis is an endemic fungal disease to Latin America caused by at least five species-level genotypes of Paracoccidioides, named P. lutzii, P. brasiliensis (S1a and S1b populations), P. americana, P. restrepiensis, and P. venezuelensis. In this manuscript, we report on Paracoccidioides sp. sampling efforts in armadillos from two different areas in Brazil. We sequenced the genomes of seven Paracoccidioides isolates and used phylogenomics and populations genetics for genotyping. We found that P. brasiliensis and P. lutzii are both present in the Amazon region. Additionally, we identified two Paracoccidioides isolates that seem to be the result of admixture between divergent populations within P. brasiliensis sensu stricto. Both of these isolates were recovered from armadillos in a P. lutzii endemic area in Midwestern Brazil. Additionally, two isolates from human patients also show evidence of resulting from admixture. Our results suggest that the populations of P. brasiliensis sensu stricto exchange genes in nature. More generally, they suggest that population structure and admixture within species is an important source of variation for pathogenic fungi.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)National Institute of Allergy and Infectious DiseasesNational Institutes of HealthNational Institute of General Medical SciencesDepartamento de Microbiologia e Imunologia Instituto de Biociências de Botucatu Universidade Estadual Paulista/UNESPDepartment of Biology University of North CarolinaFaculdade de Medicina Universidade de Brasília, DFFaculdade de Ciências Biológicas e Agrárias Universidade do Estado de Mato Grosso, Campus de Alta FlorestaPathogen and Microbiome Institute Northern Arizona UniversityDepartamento de Microbiologia e Imunologia Instituto de Biociências de Botucatu Universidade Estadual Paulista/UNESPFAPESP: 2018/06390-9CNPq: 460999/2014-1National Institute of Allergy and Infectious Diseases: ADHS16-162415National Institutes of Health: ADHS16-162415National Institute of Allergy and Infectious Diseases: ADHS17-0007403National Institutes of Health: ADHS17-0007403National Institute of General Medical Sciences: R01GM121750National Institutes of Health: R01GM121750National Institute of Allergy and Infectious Diseases: R21AI28536National Institutes of Health: R21AI28536Universidade Estadual Paulista (Unesp)University of North CarolinaUniversidade de Brasília (UnB)Universidade do Estado de Mato GrossoNorthern Arizona UniversityBagagli, Eduardo [UNESP]Matute, Daniel RicardoGarces, Hans Garcia [UNESP]Tenório, Bernardo GuerraGarces, Adalberto Garcia [UNESP]Alves, Lucas Gomes de BritoYamauchi, Danielle Hamae [UNESP]Hrycyk, Marluce FranciscaBarker, Bridget MarieTeixeira, Marcus de Melo2021-06-25T10:50:15Z2021-06-25T10:50:15Z2021-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1-11http://dx.doi.org/10.3390/jof7010054Journal of Fungi, v. 7, n. 1, p. 1-11, 2021.2309-608Xhttp://hdl.handle.net/11449/20717710.3390/jof70100542-s2.0-85099845653Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Fungiinfo:eu-repo/semantics/openAccess2021-10-23T16:22:57Zoai:repositorio.unesp.br:11449/207177Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:31:10.404013Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
title Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
spellingShingle Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
Bagagli, Eduardo [UNESP]
Admixture
Amazon
Armadillos
Paracoccidioides
Paracoccidioidomycosis
title_short Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
title_full Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
title_fullStr Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
title_full_unstemmed Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
title_sort Paracoccidioides brasiliensis isolated from nine-banded armadillos (Dasypus novemcinctus) reveal population structure and admixture in the amazon basin
author Bagagli, Eduardo [UNESP]
author_facet Bagagli, Eduardo [UNESP]
Matute, Daniel Ricardo
Garces, Hans Garcia [UNESP]
Tenório, Bernardo Guerra
Garces, Adalberto Garcia [UNESP]
Alves, Lucas Gomes de Brito
Yamauchi, Danielle Hamae [UNESP]
Hrycyk, Marluce Francisca
Barker, Bridget Marie
Teixeira, Marcus de Melo
author_role author
author2 Matute, Daniel Ricardo
Garces, Hans Garcia [UNESP]
Tenório, Bernardo Guerra
Garces, Adalberto Garcia [UNESP]
Alves, Lucas Gomes de Brito
Yamauchi, Danielle Hamae [UNESP]
Hrycyk, Marluce Francisca
Barker, Bridget Marie
Teixeira, Marcus de Melo
author2_role author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
University of North Carolina
Universidade de Brasília (UnB)
Universidade do Estado de Mato Grosso
Northern Arizona University
dc.contributor.author.fl_str_mv Bagagli, Eduardo [UNESP]
Matute, Daniel Ricardo
Garces, Hans Garcia [UNESP]
Tenório, Bernardo Guerra
Garces, Adalberto Garcia [UNESP]
Alves, Lucas Gomes de Brito
Yamauchi, Danielle Hamae [UNESP]
Hrycyk, Marluce Francisca
Barker, Bridget Marie
Teixeira, Marcus de Melo
dc.subject.por.fl_str_mv Admixture
Amazon
Armadillos
Paracoccidioides
Paracoccidioidomycosis
topic Admixture
Amazon
Armadillos
Paracoccidioides
Paracoccidioidomycosis
description Paracoccidioidomycosis is an endemic fungal disease to Latin America caused by at least five species-level genotypes of Paracoccidioides, named P. lutzii, P. brasiliensis (S1a and S1b populations), P. americana, P. restrepiensis, and P. venezuelensis. In this manuscript, we report on Paracoccidioides sp. sampling efforts in armadillos from two different areas in Brazil. We sequenced the genomes of seven Paracoccidioides isolates and used phylogenomics and populations genetics for genotyping. We found that P. brasiliensis and P. lutzii are both present in the Amazon region. Additionally, we identified two Paracoccidioides isolates that seem to be the result of admixture between divergent populations within P. brasiliensis sensu stricto. Both of these isolates were recovered from armadillos in a P. lutzii endemic area in Midwestern Brazil. Additionally, two isolates from human patients also show evidence of resulting from admixture. Our results suggest that the populations of P. brasiliensis sensu stricto exchange genes in nature. More generally, they suggest that population structure and admixture within species is an important source of variation for pathogenic fungi.
publishDate 2021
dc.date.none.fl_str_mv 2021-06-25T10:50:15Z
2021-06-25T10:50:15Z
2021-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3390/jof7010054
Journal of Fungi, v. 7, n. 1, p. 1-11, 2021.
2309-608X
http://hdl.handle.net/11449/207177
10.3390/jof7010054
2-s2.0-85099845653
url http://dx.doi.org/10.3390/jof7010054
http://hdl.handle.net/11449/207177
identifier_str_mv Journal of Fungi, v. 7, n. 1, p. 1-11, 2021.
2309-608X
10.3390/jof7010054
2-s2.0-85099845653
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Fungi
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1-11
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129080271306752