Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)

Detalhes bibliográficos
Autor(a) principal: Oliveira, Maria Lígia Marques De [UNESP]
Data de Publicação: 2021
Outros Autores: Paim, Fabilene Gomes [UNESP], Freitas, Érica Alves Serrano De, Oliveira, Claudio [UNESP], Foresti, Fausto [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/1982-0224-2020-0045
http://hdl.handle.net/11449/213105
Resumo: Characidium sp. aff. C. vidali is a species found in coastal streams in southeastern Brazil, which has karyotypic explanatory elements as the occurrence of microstructural variations, keeping the chromosomal macrostructure of the genus. The objective of this study was to apply cytomolecular tools in the chromosomes of Characidium sp. aff. C. vidali to identify characteristics in their karyotype contributing to cytogenetic definition of this species, adding information about the evolution of the chromosomal structure of the group. The species showed 2n = 50 chromosomes and from 1 to 4 additional B microchromosomes. FISH technique showed histone H3 and H4 genes in the short arm of pair 10, and microsatellites (CA)15, (CG)15, (GA)15 and (TTA)10 clustered in the subtelomeric portions of all A chromosomes, with total accumulation by supernumerary. The telomeric probe marked terminal regions of all chromosomes, in addition to the interstitial portion of four pairs, called ITS sites, with these markings being duplicated in two pairs, hence the double-ITS classification. C-banding revealed that supernumerary chromosomes are completely heterochromatic, that ITS sites are C-banding positive, but double-ITS sites are C-banding negative. So, throughout the evolution to Characidium, genomic events are occurring and restructuring chromosomes in populations.
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spelling Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)Fish cytogeneticsCrenuchidaeRepetitive DNAMolecular markersCitogenética de peixesCrenuchidaeDNA repetitivoMarcadores molecularesCharacidium sp. aff. C. vidali is a species found in coastal streams in southeastern Brazil, which has karyotypic explanatory elements as the occurrence of microstructural variations, keeping the chromosomal macrostructure of the genus. The objective of this study was to apply cytomolecular tools in the chromosomes of Characidium sp. aff. C. vidali to identify characteristics in their karyotype contributing to cytogenetic definition of this species, adding information about the evolution of the chromosomal structure of the group. The species showed 2n = 50 chromosomes and from 1 to 4 additional B microchromosomes. FISH technique showed histone H3 and H4 genes in the short arm of pair 10, and microsatellites (CA)15, (CG)15, (GA)15 and (TTA)10 clustered in the subtelomeric portions of all A chromosomes, with total accumulation by supernumerary. The telomeric probe marked terminal regions of all chromosomes, in addition to the interstitial portion of four pairs, called ITS sites, with these markings being duplicated in two pairs, hence the double-ITS classification. C-banding revealed that supernumerary chromosomes are completely heterochromatic, that ITS sites are C-banding positive, but double-ITS sites are C-banding negative. So, throughout the evolution to Characidium, genomic events are occurring and restructuring chromosomes in populations.Characidium sp. aff. C. vidali é uma espécie encontrada em riachos costeiros do sudeste do Brasil, que apresenta elementos cariotípicos elucidativos quanto à ocorrência de variações microestruturais, conservando a macroestrutura cromossômica do gênero. O objetivo deste estudo foi aplicar ferramentas citomoleculares para identificar características no cariótipo de Characidium sp. aff. C. vidali, que contribuam para a definição citogenética desta espécie, agregando informações quanto à evolução da estruturação cromossômica do grupo. A espécie apresentou 2n = 50 cromossomos, além de 1 a 4 microcromossomos B por célula. A FISH mostrou os genes de histona H3 e H4 sintênicos no braço curto do par 10, e os microssatélites (CA)15, (CG)15, (GA)15 e (TTA)10 clusterizados nas porções subteloméricas de todos os cromossomos do complemento A, com grande acúmulo nos supranumerários. A sonda telomérica identificou marcações terminais em todos os cromossomos, além de quatro pares marcados intersticialmente, chamados de sítios ITS, e dois pares com duas marcações intersticiais, chamados de double-ITS. O bandamento C revelou que os cromossomos supranumerários são completamente heterocromáticos, que os sítios ITS são banda C positivos, mas os sítios double-ITS são banda C negativos. Então, ao longo da evolução de Characidium, eventos genômicos estão ocorrendo e reestruturando cromossomos nas populações.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Departamento de Biologia Estrutural e FuncionalFundação Educacional de PenápolisUniversidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Departamento de Biologia Estrutural e FuncionalFAPESP: 2018/20610–1FAPESP: 2016/09204–6FAPESP: 2014/26508–3CNPq: 306054/2006–0Sociedade Brasileira de IctiologiaUniversidade Estadual Paulista (Unesp)Fundação Educacional de PenápolisOliveira, Maria Lígia Marques De [UNESP]Paim, Fabilene Gomes [UNESP]Freitas, Érica Alves Serrano DeOliveira, Claudio [UNESP]Foresti, Fausto [UNESP]2021-07-14T10:50:08Z2021-07-14T10:50:08Z2021-6-11info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article-application/pdfhttp://dx.doi.org/10.1590/1982-0224-2020-0045Neotropical Ichthyology. Sociedade Brasileira de Ictiologia, v. 19, n. 02, p. -, 2021.1679-62251982-0224http://hdl.handle.net/11449/21310510.1590/1982-0224-2020-0045S1679-62252021000200201S1679-62252021000200201.pdfSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengNeotropical Ichthyologyinfo:eu-repo/semantics/openAccess2024-01-25T06:32:09Zoai:repositorio.unesp.br:11449/213105Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:57:01.069099Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
title Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
spellingShingle Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
Oliveira, Maria Lígia Marques De [UNESP]
Fish cytogenetics
Crenuchidae
Repetitive DNA
Molecular markers
Citogenética de peixes
Crenuchidae
DNA repetitivo
Marcadores moleculares
title_short Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
title_full Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
title_fullStr Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
title_full_unstemmed Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
title_sort Cytomolecular investigations using repetitive DNA probes contribute to the identification and characterization of Characidium sp. aff. C. vidali (Teleostei: Characiformes)
author Oliveira, Maria Lígia Marques De [UNESP]
author_facet Oliveira, Maria Lígia Marques De [UNESP]
Paim, Fabilene Gomes [UNESP]
Freitas, Érica Alves Serrano De
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
author_role author
author2 Paim, Fabilene Gomes [UNESP]
Freitas, Érica Alves Serrano De
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Fundação Educacional de Penápolis
dc.contributor.author.fl_str_mv Oliveira, Maria Lígia Marques De [UNESP]
Paim, Fabilene Gomes [UNESP]
Freitas, Érica Alves Serrano De
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
dc.subject.por.fl_str_mv Fish cytogenetics
Crenuchidae
Repetitive DNA
Molecular markers
Citogenética de peixes
Crenuchidae
DNA repetitivo
Marcadores moleculares
topic Fish cytogenetics
Crenuchidae
Repetitive DNA
Molecular markers
Citogenética de peixes
Crenuchidae
DNA repetitivo
Marcadores moleculares
description Characidium sp. aff. C. vidali is a species found in coastal streams in southeastern Brazil, which has karyotypic explanatory elements as the occurrence of microstructural variations, keeping the chromosomal macrostructure of the genus. The objective of this study was to apply cytomolecular tools in the chromosomes of Characidium sp. aff. C. vidali to identify characteristics in their karyotype contributing to cytogenetic definition of this species, adding information about the evolution of the chromosomal structure of the group. The species showed 2n = 50 chromosomes and from 1 to 4 additional B microchromosomes. FISH technique showed histone H3 and H4 genes in the short arm of pair 10, and microsatellites (CA)15, (CG)15, (GA)15 and (TTA)10 clustered in the subtelomeric portions of all A chromosomes, with total accumulation by supernumerary. The telomeric probe marked terminal regions of all chromosomes, in addition to the interstitial portion of four pairs, called ITS sites, with these markings being duplicated in two pairs, hence the double-ITS classification. C-banding revealed that supernumerary chromosomes are completely heterochromatic, that ITS sites are C-banding positive, but double-ITS sites are C-banding negative. So, throughout the evolution to Characidium, genomic events are occurring and restructuring chromosomes in populations.
publishDate 2021
dc.date.none.fl_str_mv 2021-07-14T10:50:08Z
2021-07-14T10:50:08Z
2021-6-11
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1982-0224-2020-0045
Neotropical Ichthyology. Sociedade Brasileira de Ictiologia, v. 19, n. 02, p. -, 2021.
1679-6225
1982-0224
http://hdl.handle.net/11449/213105
10.1590/1982-0224-2020-0045
S1679-62252021000200201
S1679-62252021000200201.pdf
url http://dx.doi.org/10.1590/1982-0224-2020-0045
http://hdl.handle.net/11449/213105
identifier_str_mv Neotropical Ichthyology. Sociedade Brasileira de Ictiologia, v. 19, n. 02, p. -, 2021.
1679-6225
1982-0224
10.1590/1982-0224-2020-0045
S1679-62252021000200201
S1679-62252021000200201.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Neotropical Ichthyology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv -
application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira de Ictiologia
publisher.none.fl_str_mv Sociedade Brasileira de Ictiologia
dc.source.none.fl_str_mv SciELO
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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