Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle

Detalhes bibliográficos
Autor(a) principal: Pereira, R. J.
Data de Publicação: 2019
Outros Autores: Schenkel, F. S., Ventura, R. V., Ayres, D. R., El Faro, L., Machado, C. H. C., Albuquerque, L. G. [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1071/AN17551
http://hdl.handle.net/11449/186731
Resumo: In the present study, different random regression models, focussed on the nature of the effect of the contemporary group, fixed or random, were compared for genetic evaluation of test-day milk yield in dairy Gir breed, whose herds are characterised by relatively reduced numbers of cows. Cows were assigned to the same contemporary group if they were tested in the same herd, year and month. In one of the evaluated models, the contemporary group was investigated as a fixed effect and a clustering procedure was adopted to group herd-year subclasses in order to, at the end of the process, all contemporary groups contained at least three cows. The models were compared by the quality of fit, the accuracy of the predicted breeding values and their estimates of genetic parameters. The clustering procedure did not significantly improve the accuracy of predicted breeding values. Moreover, the fit to the data for this model was negatively affected. Therefore, this strategy should not be further implemented. The model including the herd-calving period effect and contemporary group treated as random effect showed similar characteristics to its equivalent, where the contemporary group was modelled as a fixed effect. However, the fit to the data for this model was slightly worse. Thus, the results suggest a random regression model including the herd-calving period effect and the fixed effect of contemporary group for the genetic evaluations of production traits in dairy Gir cattle. These findings could be extended to small dairy cattle populations whose herds are small-sized.
id UNSP_9ca8965edbd825bec11e374c7405becc
oai_identifier_str oai:repositorio.unesp.br:11449/186731
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattleanimal breedingdairy milk productiongenetic correlationgenetic heritabilityIn the present study, different random regression models, focussed on the nature of the effect of the contemporary group, fixed or random, were compared for genetic evaluation of test-day milk yield in dairy Gir breed, whose herds are characterised by relatively reduced numbers of cows. Cows were assigned to the same contemporary group if they were tested in the same herd, year and month. In one of the evaluated models, the contemporary group was investigated as a fixed effect and a clustering procedure was adopted to group herd-year subclasses in order to, at the end of the process, all contemporary groups contained at least three cows. The models were compared by the quality of fit, the accuracy of the predicted breeding values and their estimates of genetic parameters. The clustering procedure did not significantly improve the accuracy of predicted breeding values. Moreover, the fit to the data for this model was negatively affected. Therefore, this strategy should not be further implemented. The model including the herd-calving period effect and contemporary group treated as random effect showed similar characteristics to its equivalent, where the contemporary group was modelled as a fixed effect. However, the fit to the data for this model was slightly worse. Thus, the results suggest a random regression model including the herd-calving period effect and the fixed effect of contemporary group for the genetic evaluations of production traits in dairy Gir cattle. These findings could be extended to small dairy cattle populations whose herds are small-sized.Univ Fed Mato Grosso, Inst Ciencias Agr & Tecnol, Grp Melhoramento Anim Mato Grosso GMAT, Campus Univ Rondonopolis, BR-78735901 Rondonopolis, MT, BrazilUniv Guelph, Anim & Poultry Sci Dept, Ctr Genet Improvement Livestock, Guelph, ON N1G 2W1, CanadaBeef Improvement Opportun, Guelph, ON, CanadaAgencia Paulista Tecnol Agronegocios, Inst Zootecnia, BR-14160900 Sertaozinho, SP, BrazilAssoc Brasileira Criadores Zebu, BR-38022330 Uberaba, MG, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, BR-14870000 Jaboticabal, SP, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, BR-14870000 Jaboticabal, SP, BrazilCsiro PublishingUniversidade Federal de Mato Grosso do Sul (UFMS)Univ GuelphBeef Improvement OpportunAgencia Paulista Tecnol AgronegociosAssoc Brasileira Criadores ZebuUniversidade Estadual Paulista (Unesp)Pereira, R. J.Schenkel, F. S.Ventura, R. V.Ayres, D. R.El Faro, L.Machado, C. H. C.Albuquerque, L. G. [UNESP]2019-10-06T00:01:23Z2019-10-06T00:01:23Z2019-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article1022-1030http://dx.doi.org/10.1071/AN17551Animal Production Science. Clayton: Csiro Publishing, v. 59, n. 6, p. 1022-1030, 2019.1836-0939http://hdl.handle.net/11449/18673110.1071/AN17551WOS:000466540400003Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengAnimal Production Scienceinfo:eu-repo/semantics/openAccess2021-10-23T20:17:59Zoai:repositorio.unesp.br:11449/186731Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462021-10-23T20:17:59Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
title Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
spellingShingle Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
Pereira, R. J.
animal breeding
dairy milk production
genetic correlation
genetic heritability
title_short Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
title_full Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
title_fullStr Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
title_full_unstemmed Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
title_sort Contemporary group alternatives for genetic evaluation of milk yield in small populations of dairy cattle
author Pereira, R. J.
author_facet Pereira, R. J.
Schenkel, F. S.
Ventura, R. V.
Ayres, D. R.
El Faro, L.
Machado, C. H. C.
Albuquerque, L. G. [UNESP]
author_role author
author2 Schenkel, F. S.
Ventura, R. V.
Ayres, D. R.
El Faro, L.
Machado, C. H. C.
Albuquerque, L. G. [UNESP]
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de Mato Grosso do Sul (UFMS)
Univ Guelph
Beef Improvement Opportun
Agencia Paulista Tecnol Agronegocios
Assoc Brasileira Criadores Zebu
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Pereira, R. J.
Schenkel, F. S.
Ventura, R. V.
Ayres, D. R.
El Faro, L.
Machado, C. H. C.
Albuquerque, L. G. [UNESP]
dc.subject.por.fl_str_mv animal breeding
dairy milk production
genetic correlation
genetic heritability
topic animal breeding
dairy milk production
genetic correlation
genetic heritability
description In the present study, different random regression models, focussed on the nature of the effect of the contemporary group, fixed or random, were compared for genetic evaluation of test-day milk yield in dairy Gir breed, whose herds are characterised by relatively reduced numbers of cows. Cows were assigned to the same contemporary group if they were tested in the same herd, year and month. In one of the evaluated models, the contemporary group was investigated as a fixed effect and a clustering procedure was adopted to group herd-year subclasses in order to, at the end of the process, all contemporary groups contained at least three cows. The models were compared by the quality of fit, the accuracy of the predicted breeding values and their estimates of genetic parameters. The clustering procedure did not significantly improve the accuracy of predicted breeding values. Moreover, the fit to the data for this model was negatively affected. Therefore, this strategy should not be further implemented. The model including the herd-calving period effect and contemporary group treated as random effect showed similar characteristics to its equivalent, where the contemporary group was modelled as a fixed effect. However, the fit to the data for this model was slightly worse. Thus, the results suggest a random regression model including the herd-calving period effect and the fixed effect of contemporary group for the genetic evaluations of production traits in dairy Gir cattle. These findings could be extended to small dairy cattle populations whose herds are small-sized.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T00:01:23Z
2019-10-06T00:01:23Z
2019-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1071/AN17551
Animal Production Science. Clayton: Csiro Publishing, v. 59, n. 6, p. 1022-1030, 2019.
1836-0939
http://hdl.handle.net/11449/186731
10.1071/AN17551
WOS:000466540400003
url http://dx.doi.org/10.1071/AN17551
http://hdl.handle.net/11449/186731
identifier_str_mv Animal Production Science. Clayton: Csiro Publishing, v. 59, n. 6, p. 1022-1030, 2019.
1836-0939
10.1071/AN17551
WOS:000466540400003
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Animal Production Science
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 1022-1030
dc.publisher.none.fl_str_mv Csiro Publishing
publisher.none.fl_str_mv Csiro Publishing
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1799965433496862720