Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes
Autor(a) principal: | |
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Data de Publicação: | 2020 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
DOI: | 10.1007/s10577-020-09642-1 |
Texto Completo: | http://dx.doi.org/10.1007/s10577-020-09642-1 http://hdl.handle.net/11449/206527 |
Resumo: | Satellite DNAs (satDNA) are fast-evolving repetitive sequences organized in large tandem arrays, with characteristic enrichment in heterochromatin. Knowledge about evolutionary dynamics of this genome fraction is mostly restricted to its characterization in species with monocentric chromosomes, i.e., localized centromeres. In holocentric species, with non-localized centromeres, satDNAs have been largely ignored. Here we advance the understanding of satDNA evolution among holocentric species by characterization of the most abundant satDNAs in the hemipteran Holhymenia histrio, integrating genomic and chromosomal analyses. High plasticity at chromosomal and molecular levels was noticed for 34 satDNAs populating H. histrio genome. One satDNA family in particular (HhiSat01-184) was highly amplified on multiple chromosomes and also highly polymorphic. Our data support the emergence of a new satDNA family from this abundant satDNA, confined to a single chromosome. Moreover, we present new information about composition of a peculiar chromosome in Coreidae, the m-chromosome, and of the X chromosome. Overall, the molecular and chromosomal patterns for satDNAs in the holocentric species H. histrio seem to be similar to those observed in monocentric species. |
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Repositório Institucional da UNESP |
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spelling |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomesCoreidaeHemipteraheterochromatinrepetitive DNAsSatellite DNAs (satDNA) are fast-evolving repetitive sequences organized in large tandem arrays, with characteristic enrichment in heterochromatin. Knowledge about evolutionary dynamics of this genome fraction is mostly restricted to its characterization in species with monocentric chromosomes, i.e., localized centromeres. In holocentric species, with non-localized centromeres, satDNAs have been largely ignored. Here we advance the understanding of satDNA evolution among holocentric species by characterization of the most abundant satDNAs in the hemipteran Holhymenia histrio, integrating genomic and chromosomal analyses. High plasticity at chromosomal and molecular levels was noticed for 34 satDNAs populating H. histrio genome. One satDNA family in particular (HhiSat01-184) was highly amplified on multiple chromosomes and also highly polymorphic. Our data support the emergence of a new satDNA family from this abundant satDNA, confined to a single chromosome. Moreover, we present new information about composition of a peculiar chromosome in Coreidae, the m-chromosome, and of the X chromosome. Overall, the molecular and chromosomal patterns for satDNAs in the holocentric species H. histrio seem to be similar to those observed in monocentric species.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Departamento de Biologia Geral e Aplicada Instituto de Biociências/IB UNESP - Universidade Estadual Paulista, Rio ClaroDepartamento de Biologia Geral e Aplicada Instituto de Biociências/IB UNESP - Universidade Estadual Paulista, Rio ClaroFAPESP: 2018/21772-5FAPESP: 2019/19069-7Universidade Estadual Paulista (Unesp)Bardella, Vanessa Bellini [UNESP]Milani, Diogo [UNESP]Cabral-de-Mello, Diogo Cavalcanti [UNESP]2021-06-25T10:33:44Z2021-06-25T10:33:44Z2020-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article369-380http://dx.doi.org/10.1007/s10577-020-09642-1Chromosome Research, v. 28, n. 3-4, p. 369-380, 2020.1573-68490967-3849http://hdl.handle.net/11449/20652710.1007/s10577-020-09642-12-s2.0-85091187505Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengChromosome Researchinfo:eu-repo/semantics/openAccess2021-10-23T07:14:21Zoai:repositorio.unesp.br:11449/206527Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:15:42.477431Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes |
title |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes |
spellingShingle |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes Bardella, Vanessa Bellini [UNESP] Coreidae Hemiptera heterochromatin repetitive DNAs Bardella, Vanessa Bellini [UNESP] Coreidae Hemiptera heterochromatin repetitive DNAs |
title_short |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes |
title_full |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes |
title_fullStr |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes |
title_full_unstemmed |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes |
title_sort |
Analysis of Holhymenia histrio genome provides insight into the satDNA evolution in an insect with holocentric chromosomes |
author |
Bardella, Vanessa Bellini [UNESP] |
author_facet |
Bardella, Vanessa Bellini [UNESP] Bardella, Vanessa Bellini [UNESP] Milani, Diogo [UNESP] Cabral-de-Mello, Diogo Cavalcanti [UNESP] Milani, Diogo [UNESP] Cabral-de-Mello, Diogo Cavalcanti [UNESP] |
author_role |
author |
author2 |
Milani, Diogo [UNESP] Cabral-de-Mello, Diogo Cavalcanti [UNESP] |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Bardella, Vanessa Bellini [UNESP] Milani, Diogo [UNESP] Cabral-de-Mello, Diogo Cavalcanti [UNESP] |
dc.subject.por.fl_str_mv |
Coreidae Hemiptera heterochromatin repetitive DNAs |
topic |
Coreidae Hemiptera heterochromatin repetitive DNAs |
description |
Satellite DNAs (satDNA) are fast-evolving repetitive sequences organized in large tandem arrays, with characteristic enrichment in heterochromatin. Knowledge about evolutionary dynamics of this genome fraction is mostly restricted to its characterization in species with monocentric chromosomes, i.e., localized centromeres. In holocentric species, with non-localized centromeres, satDNAs have been largely ignored. Here we advance the understanding of satDNA evolution among holocentric species by characterization of the most abundant satDNAs in the hemipteran Holhymenia histrio, integrating genomic and chromosomal analyses. High plasticity at chromosomal and molecular levels was noticed for 34 satDNAs populating H. histrio genome. One satDNA family in particular (HhiSat01-184) was highly amplified on multiple chromosomes and also highly polymorphic. Our data support the emergence of a new satDNA family from this abundant satDNA, confined to a single chromosome. Moreover, we present new information about composition of a peculiar chromosome in Coreidae, the m-chromosome, and of the X chromosome. Overall, the molecular and chromosomal patterns for satDNAs in the holocentric species H. histrio seem to be similar to those observed in monocentric species. |
publishDate |
2020 |
dc.date.none.fl_str_mv |
2020-12-01 2021-06-25T10:33:44Z 2021-06-25T10:33:44Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s10577-020-09642-1 Chromosome Research, v. 28, n. 3-4, p. 369-380, 2020. 1573-6849 0967-3849 http://hdl.handle.net/11449/206527 10.1007/s10577-020-09642-1 2-s2.0-85091187505 |
url |
http://dx.doi.org/10.1007/s10577-020-09642-1 http://hdl.handle.net/11449/206527 |
identifier_str_mv |
Chromosome Research, v. 28, n. 3-4, p. 369-380, 2020. 1573-6849 0967-3849 10.1007/s10577-020-09642-1 2-s2.0-85091187505 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Chromosome Research |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
369-380 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1822229830537576448 |
dc.identifier.doi.none.fl_str_mv |
10.1007/s10577-020-09642-1 |