Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.molstruc.2019.07.045 http://hdl.handle.net/11449/187896 |
Resumo: | The aim of this study was to provide a crystallographic and electronic analysis of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand. The characterization was performed by single-crystal X-ray diffraction, elemental analysis and FT-IR spectroscopy. This compound showed a distorted square-planar structure and its crystal structure was in the triclinic space group P1¯ with Z = 2. Based on the Hirshfeld surface analysis, the van der Waals forces, N⋅⋅⋅H hydrogen bonds and C–H⋅⋅⋅π are the main intermolecular interactions that stabilize the crystal packing assembly. In addition, the Density Functional Theory (DFT) was used to predict the electronic properties. DFT calculations estimated interaction energy of −12.6 kcal mol−1 required to form the dimer structure. Nevertheless, based on a Natural Bond Orbital (NBO) analysis, two hydrogen bonds between nitrogen atoms of the azide group and the hydrogen atom of the amine one (N–H⋅⋅⋅N) are the main interactions responsible for the stabilization of the dimer structure studied. In addition, we were also able to characterize other important intermolecular interactions as the Sulfur⋅⋅⋅Sulfur and the C–H⋅⋅⋅N formed between the azide groups and the aromatic rings performed with the Quantum Theory of Atoms in Molecules (QTAIM). |
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Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational studyChalcogen-chalcogen interactionPseudo-halide ligandSulfur-sulfurThiosemicarbazoneThe aim of this study was to provide a crystallographic and electronic analysis of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand. The characterization was performed by single-crystal X-ray diffraction, elemental analysis and FT-IR spectroscopy. This compound showed a distorted square-planar structure and its crystal structure was in the triclinic space group P1¯ with Z = 2. Based on the Hirshfeld surface analysis, the van der Waals forces, N⋅⋅⋅H hydrogen bonds and C–H⋅⋅⋅π are the main intermolecular interactions that stabilize the crystal packing assembly. In addition, the Density Functional Theory (DFT) was used to predict the electronic properties. DFT calculations estimated interaction energy of −12.6 kcal mol−1 required to form the dimer structure. Nevertheless, based on a Natural Bond Orbital (NBO) analysis, two hydrogen bonds between nitrogen atoms of the azide group and the hydrogen atom of the amine one (N–H⋅⋅⋅N) are the main interactions responsible for the stabilization of the dimer structure studied. In addition, we were also able to characterize other important intermolecular interactions as the Sulfur⋅⋅⋅Sulfur and the C–H⋅⋅⋅N formed between the azide groups and the aromatic rings performed with the Quantum Theory of Atoms in Molecules (QTAIM).Universidade Estadual PaulistaInstituto de Química de São Carlos Universidade de São Paulo (USP)Unidade de Estudos de Medicina Veterinária Universidade Estadual do Maranhão (UEMA)Escola de Artes Ciências e Humanidades Universidade de São Paulo (USP)Department of Chemistry Faculty of Science University of MaraghehYoung Researchers and Elite Club Tabriz Branch Islamic Azad UniversityUniversidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Instituto de Química Universidade de Alfenas (Unifal)Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP)Universidade de São Paulo (USP)Universidade Estadual de Maringá (UEM)University of MaraghehIslamic Azad UniversityUniversidade Estadual Paulista (Unesp)Universidade de Alfenas (Unifal)dos Santos, Sinara F.F.Oliveira, Aline A.R. Santos, GenissonMahmoudi, GhodratAfkhami, Farhad A.Santiago, Patrícia S. [UNESP]Viana, Rommel B.da Silva, Albérico B.F.Santos, Regina H.A.2019-10-06T15:50:38Z2019-10-06T15:50:38Z2019-12-05info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article393-400http://dx.doi.org/10.1016/j.molstruc.2019.07.045Journal of Molecular Structure, v. 1197, p. 393-400.0022-2860http://hdl.handle.net/11449/18789610.1016/j.molstruc.2019.07.0452-s2.0-8506963915167053670106620870000-0002-6205-9441Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Molecular Structureinfo:eu-repo/semantics/openAccess2021-10-23T09:26:38Zoai:repositorio.unesp.br:11449/187896Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T13:41:27.510375Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study |
title |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study |
spellingShingle |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study dos Santos, Sinara F.F. Chalcogen-chalcogen interaction Pseudo-halide ligand Sulfur-sulfur Thiosemicarbazone |
title_short |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study |
title_full |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study |
title_fullStr |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study |
title_full_unstemmed |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study |
title_sort |
Crystal packing of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand: An experimental and computational study |
author |
dos Santos, Sinara F.F. |
author_facet |
dos Santos, Sinara F.F. Oliveira, Aline A. R. Santos, Genisson Mahmoudi, Ghodrat Afkhami, Farhad A. Santiago, Patrícia S. [UNESP] Viana, Rommel B. da Silva, Albérico B.F. Santos, Regina H.A. |
author_role |
author |
author2 |
Oliveira, Aline A. R. Santos, Genisson Mahmoudi, Ghodrat Afkhami, Farhad A. Santiago, Patrícia S. [UNESP] Viana, Rommel B. da Silva, Albérico B.F. Santos, Regina H.A. |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade de São Paulo (USP) Universidade Estadual de Maringá (UEM) University of Maragheh Islamic Azad University Universidade Estadual Paulista (Unesp) Universidade de Alfenas (Unifal) |
dc.contributor.author.fl_str_mv |
dos Santos, Sinara F.F. Oliveira, Aline A. R. Santos, Genisson Mahmoudi, Ghodrat Afkhami, Farhad A. Santiago, Patrícia S. [UNESP] Viana, Rommel B. da Silva, Albérico B.F. Santos, Regina H.A. |
dc.subject.por.fl_str_mv |
Chalcogen-chalcogen interaction Pseudo-halide ligand Sulfur-sulfur Thiosemicarbazone |
topic |
Chalcogen-chalcogen interaction Pseudo-halide ligand Sulfur-sulfur Thiosemicarbazone |
description |
The aim of this study was to provide a crystallographic and electronic analysis of a zinc(II)-azide complex with a N,N,S-tridentate thiosemicarbazone ligand. The characterization was performed by single-crystal X-ray diffraction, elemental analysis and FT-IR spectroscopy. This compound showed a distorted square-planar structure and its crystal structure was in the triclinic space group P1¯ with Z = 2. Based on the Hirshfeld surface analysis, the van der Waals forces, N⋅⋅⋅H hydrogen bonds and C–H⋅⋅⋅π are the main intermolecular interactions that stabilize the crystal packing assembly. In addition, the Density Functional Theory (DFT) was used to predict the electronic properties. DFT calculations estimated interaction energy of −12.6 kcal mol−1 required to form the dimer structure. Nevertheless, based on a Natural Bond Orbital (NBO) analysis, two hydrogen bonds between nitrogen atoms of the azide group and the hydrogen atom of the amine one (N–H⋅⋅⋅N) are the main interactions responsible for the stabilization of the dimer structure studied. In addition, we were also able to characterize other important intermolecular interactions as the Sulfur⋅⋅⋅Sulfur and the C–H⋅⋅⋅N formed between the azide groups and the aromatic rings performed with the Quantum Theory of Atoms in Molecules (QTAIM). |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T15:50:38Z 2019-10-06T15:50:38Z 2019-12-05 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.molstruc.2019.07.045 Journal of Molecular Structure, v. 1197, p. 393-400. 0022-2860 http://hdl.handle.net/11449/187896 10.1016/j.molstruc.2019.07.045 2-s2.0-85069639151 6705367010662087 0000-0002-6205-9441 |
url |
http://dx.doi.org/10.1016/j.molstruc.2019.07.045 http://hdl.handle.net/11449/187896 |
identifier_str_mv |
Journal of Molecular Structure, v. 1197, p. 393-400. 0022-2860 10.1016/j.molstruc.2019.07.045 2-s2.0-85069639151 6705367010662087 0000-0002-6205-9441 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal of Molecular Structure |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
393-400 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128265864347648 |