Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt
Autor(a) principal: | |
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Data de Publicação: | 2005 |
Outros Autores: | , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/S1415-47572005000400017 http://hdl.handle.net/11449/17960 |
Resumo: | Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus. |
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Repositório Institucional da UNESP |
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spelling |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalyptEucalyptusboronxylem loadingExpressed Sequence Tag (EST)BOR1Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Universidade Estadual Paulista Instituto de Biociências Departamento de GenéticaUniversidade Estadual Paulista Faculdade de Ciências AgronômicasUniversidade Estadual Paulista Instituto de Biociências Departamento de GenéticaUniversidade Estadual Paulista Faculdade de Ciências AgronômicasSociedade Brasileira de GenéticaUniversidade Estadual Paulista (Unesp)Domingues, Douglas Silva [UNESP]Leite, Susi Meire Maximino [UNESP]Farro, Ana Paula Cazerta [UNESP]Coscrato, Virgínia Elias [UNESP]Mori, Edson Seizo [UNESP]Furtado, Edson Luiz [UNESP]Wilcken, Carlos Frederico [UNESP]Velini, Edivaldo Domingues [UNESP]Guerrini, Iraê Amaral [UNESP]Maia, Ivan de Godoy [UNESP]Marino, Celso Luis [UNESP]2014-05-20T13:50:20Z2014-05-20T13:50:20Z2005-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article625-629application/pdfhttp://dx.doi.org/10.1590/S1415-47572005000400017Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 28, n. 3, p. 625-629, 2005.1415-4757http://hdl.handle.net/11449/1796010.1590/S1415-47572005000400017S1415-47572005000400017S1415-47572005000400017.pdf86492220991761620165348738208319985549344816170238459894858333950000-0003-0431-59420000-0002-6924-835X0000-0003-4524-954XSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biology1.4930,638info:eu-repo/semantics/openAccess2024-04-30T15:58:34Zoai:repositorio.unesp.br:11449/17960Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:02:01.714572Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
spellingShingle |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt Domingues, Douglas Silva [UNESP] Eucalyptus boron xylem loading Expressed Sequence Tag (EST) BOR1 |
title_short |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_full |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_fullStr |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_full_unstemmed |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
title_sort |
Boron transport in Eucalyptus. 2. Identification in silico of a putative boron transporter for xylem loading in eucalypt |
author |
Domingues, Douglas Silva [UNESP] |
author_facet |
Domingues, Douglas Silva [UNESP] Leite, Susi Meire Maximino [UNESP] Farro, Ana Paula Cazerta [UNESP] Coscrato, Virgínia Elias [UNESP] Mori, Edson Seizo [UNESP] Furtado, Edson Luiz [UNESP] Wilcken, Carlos Frederico [UNESP] Velini, Edivaldo Domingues [UNESP] Guerrini, Iraê Amaral [UNESP] Maia, Ivan de Godoy [UNESP] Marino, Celso Luis [UNESP] |
author_role |
author |
author2 |
Leite, Susi Meire Maximino [UNESP] Farro, Ana Paula Cazerta [UNESP] Coscrato, Virgínia Elias [UNESP] Mori, Edson Seizo [UNESP] Furtado, Edson Luiz [UNESP] Wilcken, Carlos Frederico [UNESP] Velini, Edivaldo Domingues [UNESP] Guerrini, Iraê Amaral [UNESP] Maia, Ivan de Godoy [UNESP] Marino, Celso Luis [UNESP] |
author2_role |
author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Domingues, Douglas Silva [UNESP] Leite, Susi Meire Maximino [UNESP] Farro, Ana Paula Cazerta [UNESP] Coscrato, Virgínia Elias [UNESP] Mori, Edson Seizo [UNESP] Furtado, Edson Luiz [UNESP] Wilcken, Carlos Frederico [UNESP] Velini, Edivaldo Domingues [UNESP] Guerrini, Iraê Amaral [UNESP] Maia, Ivan de Godoy [UNESP] Marino, Celso Luis [UNESP] |
dc.subject.por.fl_str_mv |
Eucalyptus boron xylem loading Expressed Sequence Tag (EST) BOR1 |
topic |
Eucalyptus boron xylem loading Expressed Sequence Tag (EST) BOR1 |
description |
Boron (B) is a low mobility plant micronutrient whose molecular mechanisms of absorption and translocation are still controversial. Many factors are involved in tolerance to Boron excess or deficiency. Recently, the first protein linked to boron transport in biological systems, BOR1, was characterized in Arabidopsis thaliana. This protein is involved in boron xylem loading and is similar to bicarbonate transporters found in animals. There are indications that BOR1 is a member of a conserved protein family in plants. In this work, FORESTS database was used to identify sequences similar to this protein family, looking for a probable BOR1 homolog in eucalypt. We found five consensus sequences similar to BOR1; three of them were then used in multiple alignment analysis. Based on amino acid similarity and in silico expression patterns, a consensus sequence was identified as a candidate BOR1 homolog, helping deeper experimental assays that could identify the function of this protein family in Eucalyptus. |
publishDate |
2005 |
dc.date.none.fl_str_mv |
2005-01-01 2014-05-20T13:50:20Z 2014-05-20T13:50:20Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S1415-47572005000400017 Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 28, n. 3, p. 625-629, 2005. 1415-4757 http://hdl.handle.net/11449/17960 10.1590/S1415-47572005000400017 S1415-47572005000400017 S1415-47572005000400017.pdf 8649222099176162 0165348738208319 9855493448161702 3845989485833395 0000-0003-0431-5942 0000-0002-6924-835X 0000-0003-4524-954X |
url |
http://dx.doi.org/10.1590/S1415-47572005000400017 http://hdl.handle.net/11449/17960 |
identifier_str_mv |
Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 28, n. 3, p. 625-629, 2005. 1415-4757 10.1590/S1415-47572005000400017 S1415-47572005000400017 S1415-47572005000400017.pdf 8649222099176162 0165348738208319 9855493448161702 3845989485833395 0000-0003-0431-5942 0000-0002-6924-835X 0000-0003-4524-954X |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Biology 1.493 0,638 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
625-629 application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
SciELO reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129384956035072 |