Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing

Detalhes bibliográficos
Autor(a) principal: Mesquita, F. S.
Data de Publicação: 2016
Outros Autores: Ramos, R. S., Pugliesi, G., Andrade, S. C. S., Van Hoeck, V., Langbeen, A., Oliveira, M. L., Gonella-Diaza, A. M., Gasparin, G., Fukumasu, H., Pulz, L. H., Membrive, C. M. [UNESP], Coutinho, L. L., Binelli, M.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.gdata.2015.11.008
http://hdl.handle.net/11449/164730
Resumo: Studying the multitude of molecular networks and pathways that are potentially involved in a complex trait such as fertility requires an equally complex and broad strategy. Here, we used Next-Generation Sequencing for the characterization of the transcriptional signature of the bovine endometrial tissue. Periovulatory endocrine environments were manipulated to generate two distinctly different fertility phenotypes. Cycling, non-lactating, multiparous Nelore cows were manipulated to ovulate larger (>13 mm; LF group; high fertility phenotype) or smaller (<12 mm; SF group) follicles. As a result, greater proestrus estrogen concentrations, corpora lutea and early diestrus progesterone concentrations were also observed in LF group in comparison to SF group. Endometrial cell proliferation was estimated by the protein marker MKI67 on tissues collected 4 (D4) and 7 (D7) days after induction of ovulation. Total RNA extracts from D7 were sequenced and compared according to the transcriptional profile of each experimental group (LF versus SF). Functional enrichment analysis revealed that LF and SF endometria were asynchronous in regards to their phenotype manifestation. Major findings indicated an LF endometrium that was switching phenotypes earlier than the SF one. More specifically, a proliferating SF endometrium was observed on D7, whereas the LF tissue, which expressed a proliferative phenotype earlier at D4, seemed to have already shifted towards a biosynthetically and metabolically active endometrium on D7. Data on MKI67 support the transcriptomic results. RNA-Seq-derived transcriptional profile of the endometrial tissue indicated a temporal effect of the periovulatory endocrine environment, suggesting that the moment of the endometrial exposure to the ovarian steroids, E2 and P4, regulates the timing of phenotype manifestation. Gene expression profiling revealed molecules that may be targeted to elucidate ovarian steroid-dependent mechanisms that regulate endometrial tissue receptivity. Data was deposited in the SRA database from NCBI (SRA Experiment SRP051330) and are associated with the Bio-Project (PRJNA270391). An overview of the gene expression data has been deposited in NCBI's Gene Expression Omnibus (GEO) and is accessible through GEO Series accession number GSE65450. Further assessment of the data in combination with other data sets exploring the transcriptional profile of the endometrial tissue during early diestrus may potentially identify novel molecular mechanisms and/or markers of the uterine receptivity. (c) 2015 The Authors. Published by Elsevier Inc.
id UNSP_a718eeb421e5dbe03c1ae87883090053
oai_identifier_str oai:repositorio.unesp.br:11449/164730
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Endometrial transcriptional profiling of a bovine fertility model by Next-Generation SequencingBovineEndometriumFollicleOvarian steroidsTranscriptomicStudying the multitude of molecular networks and pathways that are potentially involved in a complex trait such as fertility requires an equally complex and broad strategy. Here, we used Next-Generation Sequencing for the characterization of the transcriptional signature of the bovine endometrial tissue. Periovulatory endocrine environments were manipulated to generate two distinctly different fertility phenotypes. Cycling, non-lactating, multiparous Nelore cows were manipulated to ovulate larger (>13 mm; LF group; high fertility phenotype) or smaller (<12 mm; SF group) follicles. As a result, greater proestrus estrogen concentrations, corpora lutea and early diestrus progesterone concentrations were also observed in LF group in comparison to SF group. Endometrial cell proliferation was estimated by the protein marker MKI67 on tissues collected 4 (D4) and 7 (D7) days after induction of ovulation. Total RNA extracts from D7 were sequenced and compared according to the transcriptional profile of each experimental group (LF versus SF). Functional enrichment analysis revealed that LF and SF endometria were asynchronous in regards to their phenotype manifestation. Major findings indicated an LF endometrium that was switching phenotypes earlier than the SF one. More specifically, a proliferating SF endometrium was observed on D7, whereas the LF tissue, which expressed a proliferative phenotype earlier at D4, seemed to have already shifted towards a biosynthetically and metabolically active endometrium on D7. Data on MKI67 support the transcriptomic results. RNA-Seq-derived transcriptional profile of the endometrial tissue indicated a temporal effect of the periovulatory endocrine environment, suggesting that the moment of the endometrial exposure to the ovarian steroids, E2 and P4, regulates the timing of phenotype manifestation. Gene expression profiling revealed molecules that may be targeted to elucidate ovarian steroid-dependent mechanisms that regulate endometrial tissue receptivity. Data was deposited in the SRA database from NCBI (SRA Experiment SRP051330) and are associated with the Bio-Project (PRJNA270391). An overview of the gene expression data has been deposited in NCBI's Gene Expression Omnibus (GEO) and is accessible through GEO Series accession number GSE65450. Further assessment of the data in combination with other data sets exploring the transcriptional profile of the endometrial tissue during early diestrus may potentially identify novel molecular mechanisms and/or markers of the uterine receptivity. (c) 2015 The Authors. Published by Elsevier Inc.Univ Fed Pampa, Curso Med Vet, Uruguaiana, RS, BrazilUniv Sao Paulo, Fac Med Vet & Zootecnia, Dept Anim Reprod, Pirassununga, SP, BrazilUniv Sao Paulo, Escola Super Agr Luiz de Queiroz, Dept Zootecnia, Piracicaba, SP, BrazilUniv Sao Paulo, Fac Zootecnia & Engn Alimentos, Pirassununga, SP, BrazilUniv Estadual Paulista, Campus Expt Dracena, Dracena, SP, BrazilUniv Antwerp, Fac Pharmaceut Biomed & Vet Sci, Antwerp, BelgiumUniv Estadual Paulista, Campus Expt Dracena, Dracena, SP, BrazilElsevier B.V.Univ Fed PampaUniversidade de São Paulo (USP)Universidade Estadual Paulista (Unesp)Univ AntwerpMesquita, F. S.Ramos, R. S.Pugliesi, G.Andrade, S. C. S.Van Hoeck, V.Langbeen, A.Oliveira, M. L.Gonella-Diaza, A. M.Gasparin, G.Fukumasu, H.Pulz, L. H.Membrive, C. M. [UNESP]Coutinho, L. L.Binelli, M.2018-11-26T17:55:52Z2018-11-26T17:55:52Z2016-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article26-28application/pdfhttp://dx.doi.org/10.1016/j.gdata.2015.11.008Genomics Data. Amsterdam: Elsevier Science Bv, v. 7, p. 26-28, 2016.2213-5960http://hdl.handle.net/11449/16473010.1016/j.gdata.2015.11.008WOS:000377761100008WOS000377761100008.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenomics Data0,584info:eu-repo/semantics/openAccess2024-09-09T14:01:19Zoai:repositorio.unesp.br:11449/164730Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-09-09T14:01:19Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
title Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
spellingShingle Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
Mesquita, F. S.
Bovine
Endometrium
Follicle
Ovarian steroids
Transcriptomic
title_short Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
title_full Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
title_fullStr Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
title_full_unstemmed Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
title_sort Endometrial transcriptional profiling of a bovine fertility model by Next-Generation Sequencing
author Mesquita, F. S.
author_facet Mesquita, F. S.
Ramos, R. S.
Pugliesi, G.
Andrade, S. C. S.
Van Hoeck, V.
Langbeen, A.
Oliveira, M. L.
Gonella-Diaza, A. M.
Gasparin, G.
Fukumasu, H.
Pulz, L. H.
Membrive, C. M. [UNESP]
Coutinho, L. L.
Binelli, M.
author_role author
author2 Ramos, R. S.
Pugliesi, G.
Andrade, S. C. S.
Van Hoeck, V.
Langbeen, A.
Oliveira, M. L.
Gonella-Diaza, A. M.
Gasparin, G.
Fukumasu, H.
Pulz, L. H.
Membrive, C. M. [UNESP]
Coutinho, L. L.
Binelli, M.
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Univ Fed Pampa
Universidade de São Paulo (USP)
Universidade Estadual Paulista (Unesp)
Univ Antwerp
dc.contributor.author.fl_str_mv Mesquita, F. S.
Ramos, R. S.
Pugliesi, G.
Andrade, S. C. S.
Van Hoeck, V.
Langbeen, A.
Oliveira, M. L.
Gonella-Diaza, A. M.
Gasparin, G.
Fukumasu, H.
Pulz, L. H.
Membrive, C. M. [UNESP]
Coutinho, L. L.
Binelli, M.
dc.subject.por.fl_str_mv Bovine
Endometrium
Follicle
Ovarian steroids
Transcriptomic
topic Bovine
Endometrium
Follicle
Ovarian steroids
Transcriptomic
description Studying the multitude of molecular networks and pathways that are potentially involved in a complex trait such as fertility requires an equally complex and broad strategy. Here, we used Next-Generation Sequencing for the characterization of the transcriptional signature of the bovine endometrial tissue. Periovulatory endocrine environments were manipulated to generate two distinctly different fertility phenotypes. Cycling, non-lactating, multiparous Nelore cows were manipulated to ovulate larger (>13 mm; LF group; high fertility phenotype) or smaller (<12 mm; SF group) follicles. As a result, greater proestrus estrogen concentrations, corpora lutea and early diestrus progesterone concentrations were also observed in LF group in comparison to SF group. Endometrial cell proliferation was estimated by the protein marker MKI67 on tissues collected 4 (D4) and 7 (D7) days after induction of ovulation. Total RNA extracts from D7 were sequenced and compared according to the transcriptional profile of each experimental group (LF versus SF). Functional enrichment analysis revealed that LF and SF endometria were asynchronous in regards to their phenotype manifestation. Major findings indicated an LF endometrium that was switching phenotypes earlier than the SF one. More specifically, a proliferating SF endometrium was observed on D7, whereas the LF tissue, which expressed a proliferative phenotype earlier at D4, seemed to have already shifted towards a biosynthetically and metabolically active endometrium on D7. Data on MKI67 support the transcriptomic results. RNA-Seq-derived transcriptional profile of the endometrial tissue indicated a temporal effect of the periovulatory endocrine environment, suggesting that the moment of the endometrial exposure to the ovarian steroids, E2 and P4, regulates the timing of phenotype manifestation. Gene expression profiling revealed molecules that may be targeted to elucidate ovarian steroid-dependent mechanisms that regulate endometrial tissue receptivity. Data was deposited in the SRA database from NCBI (SRA Experiment SRP051330) and are associated with the Bio-Project (PRJNA270391). An overview of the gene expression data has been deposited in NCBI's Gene Expression Omnibus (GEO) and is accessible through GEO Series accession number GSE65450. Further assessment of the data in combination with other data sets exploring the transcriptional profile of the endometrial tissue during early diestrus may potentially identify novel molecular mechanisms and/or markers of the uterine receptivity. (c) 2015 The Authors. Published by Elsevier Inc.
publishDate 2016
dc.date.none.fl_str_mv 2016-03-01
2018-11-26T17:55:52Z
2018-11-26T17:55:52Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.gdata.2015.11.008
Genomics Data. Amsterdam: Elsevier Science Bv, v. 7, p. 26-28, 2016.
2213-5960
http://hdl.handle.net/11449/164730
10.1016/j.gdata.2015.11.008
WOS:000377761100008
WOS000377761100008.pdf
url http://dx.doi.org/10.1016/j.gdata.2015.11.008
http://hdl.handle.net/11449/164730
identifier_str_mv Genomics Data. Amsterdam: Elsevier Science Bv, v. 7, p. 26-28, 2016.
2213-5960
10.1016/j.gdata.2015.11.008
WOS:000377761100008
WOS000377761100008.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genomics Data
0,584
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 26-28
application/pdf
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
_version_ 1813546574650802176