Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1007/s42770-021-00491-6 http://hdl.handle.net/11449/210337 |
Resumo: | There is increasing evidence showing positive association between changes in oral microbiome and the occurrence of oral squamous cell carcinoma (OSCC). Alcohol- and nicotine-related products can induce microbial changes but are still unknown if these changes are related to cancerous lesion sites. In an attempt to understand how these changes can influence the OSCC development and maintenance, the aim of this study was to investigate the oral microbiome linked with OSCC as well as to identify functional signatures and associate them with healthy or precancerous and cancerous sites. Our group used data of oral microbiomes available in public repositories. The analysis included data of oral microbiomes from electronic cigarette users, alcohol consumers, and precancerous and OSCC samples. An R-based pipeline was used for taxonomic and functional prediction analysis. The Streptococcus spp. genus was the main class identified in the healthy group. Haemophilus spp. predominated in precancerous lesions. OSCC samples revealed a higher relative abundance compared with the other groups, represented by an increased proportion of Fusobacterium spp., Prevotella spp., Haemophilus spp., and Campylobacter spp. Venn diagram analysis showed 52 genera exclusive of OSCC samples. Both precancerous and OSCC samples seemed to present a specific associated functional pattern. They were menaquinone-dependent protoporphyrinogen oxidase pattern enhanced in the former and both 3 ',5 '-cyclic-nucleotide phosphodiesterase (purine metabolism) and iron(III) transport system ATP-binding protein enhanced in the latter. We conclude that although precancerous and OSCC samples present some differences on microbial profile, both microbiomes act as iron chelators-like potentially contributing to tumor growth. |
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Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironmentMicrobiomeOral squamous cell carcinomaAlcoholCigaretteFunctional pathways predictionIron(III) transport systemThere is increasing evidence showing positive association between changes in oral microbiome and the occurrence of oral squamous cell carcinoma (OSCC). Alcohol- and nicotine-related products can induce microbial changes but are still unknown if these changes are related to cancerous lesion sites. In an attempt to understand how these changes can influence the OSCC development and maintenance, the aim of this study was to investigate the oral microbiome linked with OSCC as well as to identify functional signatures and associate them with healthy or precancerous and cancerous sites. Our group used data of oral microbiomes available in public repositories. The analysis included data of oral microbiomes from electronic cigarette users, alcohol consumers, and precancerous and OSCC samples. An R-based pipeline was used for taxonomic and functional prediction analysis. The Streptococcus spp. genus was the main class identified in the healthy group. Haemophilus spp. predominated in precancerous lesions. OSCC samples revealed a higher relative abundance compared with the other groups, represented by an increased proportion of Fusobacterium spp., Prevotella spp., Haemophilus spp., and Campylobacter spp. Venn diagram analysis showed 52 genera exclusive of OSCC samples. Both precancerous and OSCC samples seemed to present a specific associated functional pattern. They were menaquinone-dependent protoporphyrinogen oxidase pattern enhanced in the former and both 3 ',5 '-cyclic-nucleotide phosphodiesterase (purine metabolism) and iron(III) transport system ATP-binding protein enhanced in the latter. We conclude that although precancerous and OSCC samples present some differences on microbial profile, both microbiomes act as iron chelators-like potentially contributing to tumor growth.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Fed Rio Grande do Sul, Fac Dent, Prevent & Community Dent Dept, BR-90035003 Porto Alegre, RS, BrazilUniv Sao Paulo, Fac Med Ribeirao Preto, Postgrad Program Clin Oncol Stem Cells & Cell The, BR-14049900 Ribeirao Preto, SP, BrazilReg Blood Ctr Ribeirao Preto, Natl Inst Sci & Technol Stem Cell & Cell Therapy, Ctr Cell Based Therapy CEPID FAPESP, Mol Genet & Bioinfonnat Lab MGBL, Rua Tenente Catao Roxo 2501, BR-14049900 Ribeirao Preto, SP, BrazilUniv Sao Paulo, Ribeirio Preto Med Sch, Dept Genet, BR-14049900 Ribeirao Preto, SP, BrazilUniv Sao Paulo, Luiz de Queiroz Coll Agr, Dept Entomol & Acarol, BR-13418900 Piracicaba, SP, BrazilUniv Sao Paulo, Ribeirao Preto Med Sch, BR-14049900 Ribeirao Preto, SP, BrazilUniv Sao Paulo, Sch Publ Hlth, Dept Nutr, BR-01246904 Sao Paulo, SP, BrazilUniv Sao Paulo, Sao Carlos Sch Engn, Dept Hydraul & Sanitat, BR-13563120 Sao Carlos, SP, BrazilInst Canc Res IPEC, BR-85015430 Guarapuava, PR, BrazilUniv Estadual Centro Oeste, Dept Med, BR-85015430 Guarapuava, PR, BrazilSao Paulo State Univ, Sch Pharmaceut Sci, Dept Food & Nutr, Araraquara, SP, BrazilUniv Sao Paulo, Ribeirao Preto Med Sch, Dept Biochem & Immunol, Ribeirao Preto, SP, BrazilUniv Paulista, Inst Hlth Sci, Undergrad Biol Sci, Ribeirao Preto, SP, BrazilUniv Fed Parana, Grad Program Bioinformat Profess & Technol Educ S, Curitiba, Parana, BrazilUniv Fed Amapa, Dept Biol Sci & Hlth, Macapa, AP, BrazilEmbrapa Southeast Livestock EMBRAPA, Sao Paulo, BrazilFARVET, Labs Invest & Desarrollo, Chincha Alta, Ica, PeruUniv San Martin de Porres, Ctr Invest Genet & Biol Mol CIGBM, Lima, PeruPara State Univ, Grad Program Parasit Biol Amazon, Belem, Para, BrazilPara State Univ, Inst Technol, Dept Elect & Biomed Engn, Belem, Para, BrazilFundacao Ctr Controle Oncol Estado Amazonas, Dept Educ & Res, Manaus, Amazonas, BrazilUniv Fed Goias, Inst Pathol Trop & Publ Hlth, Goiania, Go, BrazilUniv Sao Paulo, Sch Dent Ribeirao Preto, Dept Oral Maxillofacial Surg & Periodontol, Ribeirao Preto, SP, BrazilUniv Sao Paulo, Sch Arts Sci & Humanities, Sao Paulo, BrazilBlood Ctr Ribeirao Preto, Ctr Cell Based Therapy CEPID FAPESP, Mol Genet & Bioinformat Lab MGBL, Rua Tenente Catao Roxo 2501, BR-14051140 Ribeirao Preto, SP, BrazilSao Paulo State Univ, Sch Pharmaceut Sci, Dept Food & Nutr, Araraquara, SP, BrazilCNPq: 465539/2014-9FAPESP: 2013/08135-2FAPESP: 17/23205-8FAPESP: 19/08528-0SpringerUniv Fed Rio Grande do SulUniversidade de São Paulo (USP)Reg Blood Ctr Ribeirao PretoInst Canc Res IPECUniv Estadual Centro OesteUniversidade Estadual Paulista (Unesp)Univ PaulistaUniv Fed ParanaUniv Fed AmapaEmpresa Brasileira de Pesquisa Agropecuária (EMBRAPA)FARVETUniv San Martin de PorresPara State UnivFundacao Ctr Controle Oncol Estado AmazonasUniversidade Federal de Goiás (UFG)Blood Ctr Ribeirao PretoArthur, Rodrigo AlexBezerra, Rafael dos SantosBianchi Ximenez, Joao PauloMerlin, Bruna LaisMorraye, Raphael de AndradeNeto, Joao ValentiniNasser Fava, Natalia MeloAlves Figueiredo, David LivingstoneOliveira de Biagi Jr, Carlos AlbertoMontibeller, Maria Jara [UNESP]Guimaraes, Jhefferson BarbosaAlves, Ellen GomesSchreiner, MoniqueCosta, Tiago Silva daLiberati da Silva, Charlie FelipeMalheiros, Jessica MoraesBurda da Silva, Luan HenriqueRibas, Guilherme TabordaAchallma, Daisy ObispoBraga, Camila MargalhoAssis Andrade, Karen FlavianeAlves Martins, Valquiria do CarmoNestor dos Santos, Glauco ViniciusGranatto, Caroline FabianeTerin, Ulisses CostaSanches, Igor HenriqueRamos, Diana EstefaniaGaray-Malpartida, Humberto MiguelPereira de Souza, Gabriela MarcelinoSlavov, Svetoslav NanevSilva Jr, Wilson AraujoSummer Course 20202021-06-25T15:05:21Z2021-06-25T15:05:21Z2021-05-18info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article16http://dx.doi.org/10.1007/s42770-021-00491-6Brazilian Journal Of Microbiology. New York: Springer, 16 p., 2021.1517-8382http://hdl.handle.net/11449/21033710.1007/s42770-021-00491-6WOS:000651339000001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Journal Of Microbiologyinfo:eu-repo/semantics/openAccess2024-06-21T12:47:11Zoai:repositorio.unesp.br:11449/210337Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T21:05:03.997231Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment |
title |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment |
spellingShingle |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment Arthur, Rodrigo Alex Microbiome Oral squamous cell carcinoma Alcohol Cigarette Functional pathways prediction Iron(III) transport system |
title_short |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment |
title_full |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment |
title_fullStr |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment |
title_full_unstemmed |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment |
title_sort |
Microbiome and oral squamous cell carcinoma: a possible interplay on iron metabolism and its impact on tumor microenvironment |
author |
Arthur, Rodrigo Alex |
author_facet |
Arthur, Rodrigo Alex Bezerra, Rafael dos Santos Bianchi Ximenez, Joao Paulo Merlin, Bruna Lais Morraye, Raphael de Andrade Neto, Joao Valentini Nasser Fava, Natalia Melo Alves Figueiredo, David Livingstone Oliveira de Biagi Jr, Carlos Alberto Montibeller, Maria Jara [UNESP] Guimaraes, Jhefferson Barbosa Alves, Ellen Gomes Schreiner, Monique Costa, Tiago Silva da Liberati da Silva, Charlie Felipe Malheiros, Jessica Moraes Burda da Silva, Luan Henrique Ribas, Guilherme Taborda Achallma, Daisy Obispo Braga, Camila Margalho Assis Andrade, Karen Flaviane Alves Martins, Valquiria do Carmo Nestor dos Santos, Glauco Vinicius Granatto, Caroline Fabiane Terin, Ulisses Costa Sanches, Igor Henrique Ramos, Diana Estefania Garay-Malpartida, Humberto Miguel Pereira de Souza, Gabriela Marcelino Slavov, Svetoslav Nanev Silva Jr, Wilson Araujo Summer Course 2020 |
author_role |
author |
author2 |
Bezerra, Rafael dos Santos Bianchi Ximenez, Joao Paulo Merlin, Bruna Lais Morraye, Raphael de Andrade Neto, Joao Valentini Nasser Fava, Natalia Melo Alves Figueiredo, David Livingstone Oliveira de Biagi Jr, Carlos Alberto Montibeller, Maria Jara [UNESP] Guimaraes, Jhefferson Barbosa Alves, Ellen Gomes Schreiner, Monique Costa, Tiago Silva da Liberati da Silva, Charlie Felipe Malheiros, Jessica Moraes Burda da Silva, Luan Henrique Ribas, Guilherme Taborda Achallma, Daisy Obispo Braga, Camila Margalho Assis Andrade, Karen Flaviane Alves Martins, Valquiria do Carmo Nestor dos Santos, Glauco Vinicius Granatto, Caroline Fabiane Terin, Ulisses Costa Sanches, Igor Henrique Ramos, Diana Estefania Garay-Malpartida, Humberto Miguel Pereira de Souza, Gabriela Marcelino Slavov, Svetoslav Nanev Silva Jr, Wilson Araujo Summer Course 2020 |
author2_role |
author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Univ Fed Rio Grande do Sul Universidade de São Paulo (USP) Reg Blood Ctr Ribeirao Preto Inst Canc Res IPEC Univ Estadual Centro Oeste Universidade Estadual Paulista (Unesp) Univ Paulista Univ Fed Parana Univ Fed Amapa Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA) FARVET Univ San Martin de Porres Para State Univ Fundacao Ctr Controle Oncol Estado Amazonas Universidade Federal de Goiás (UFG) Blood Ctr Ribeirao Preto |
dc.contributor.author.fl_str_mv |
Arthur, Rodrigo Alex Bezerra, Rafael dos Santos Bianchi Ximenez, Joao Paulo Merlin, Bruna Lais Morraye, Raphael de Andrade Neto, Joao Valentini Nasser Fava, Natalia Melo Alves Figueiredo, David Livingstone Oliveira de Biagi Jr, Carlos Alberto Montibeller, Maria Jara [UNESP] Guimaraes, Jhefferson Barbosa Alves, Ellen Gomes Schreiner, Monique Costa, Tiago Silva da Liberati da Silva, Charlie Felipe Malheiros, Jessica Moraes Burda da Silva, Luan Henrique Ribas, Guilherme Taborda Achallma, Daisy Obispo Braga, Camila Margalho Assis Andrade, Karen Flaviane Alves Martins, Valquiria do Carmo Nestor dos Santos, Glauco Vinicius Granatto, Caroline Fabiane Terin, Ulisses Costa Sanches, Igor Henrique Ramos, Diana Estefania Garay-Malpartida, Humberto Miguel Pereira de Souza, Gabriela Marcelino Slavov, Svetoslav Nanev Silva Jr, Wilson Araujo Summer Course 2020 |
dc.subject.por.fl_str_mv |
Microbiome Oral squamous cell carcinoma Alcohol Cigarette Functional pathways prediction Iron(III) transport system |
topic |
Microbiome Oral squamous cell carcinoma Alcohol Cigarette Functional pathways prediction Iron(III) transport system |
description |
There is increasing evidence showing positive association between changes in oral microbiome and the occurrence of oral squamous cell carcinoma (OSCC). Alcohol- and nicotine-related products can induce microbial changes but are still unknown if these changes are related to cancerous lesion sites. In an attempt to understand how these changes can influence the OSCC development and maintenance, the aim of this study was to investigate the oral microbiome linked with OSCC as well as to identify functional signatures and associate them with healthy or precancerous and cancerous sites. Our group used data of oral microbiomes available in public repositories. The analysis included data of oral microbiomes from electronic cigarette users, alcohol consumers, and precancerous and OSCC samples. An R-based pipeline was used for taxonomic and functional prediction analysis. The Streptococcus spp. genus was the main class identified in the healthy group. Haemophilus spp. predominated in precancerous lesions. OSCC samples revealed a higher relative abundance compared with the other groups, represented by an increased proportion of Fusobacterium spp., Prevotella spp., Haemophilus spp., and Campylobacter spp. Venn diagram analysis showed 52 genera exclusive of OSCC samples. Both precancerous and OSCC samples seemed to present a specific associated functional pattern. They were menaquinone-dependent protoporphyrinogen oxidase pattern enhanced in the former and both 3 ',5 '-cyclic-nucleotide phosphodiesterase (purine metabolism) and iron(III) transport system ATP-binding protein enhanced in the latter. We conclude that although precancerous and OSCC samples present some differences on microbial profile, both microbiomes act as iron chelators-like potentially contributing to tumor growth. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06-25T15:05:21Z 2021-06-25T15:05:21Z 2021-05-18 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1007/s42770-021-00491-6 Brazilian Journal Of Microbiology. New York: Springer, 16 p., 2021. 1517-8382 http://hdl.handle.net/11449/210337 10.1007/s42770-021-00491-6 WOS:000651339000001 |
url |
http://dx.doi.org/10.1007/s42770-021-00491-6 http://hdl.handle.net/11449/210337 |
identifier_str_mv |
Brazilian Journal Of Microbiology. New York: Springer, 16 p., 2021. 1517-8382 10.1007/s42770-021-00491-6 WOS:000651339000001 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Brazilian Journal Of Microbiology |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
16 |
dc.publisher.none.fl_str_mv |
Springer |
publisher.none.fl_str_mv |
Springer |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808129281719533568 |