Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum
Autor(a) principal: | |
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Data de Publicação: | 2012 |
Outros Autores: | , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
DOI: | 10.1016/j.bjid.2012.08.009 |
Texto Completo: | http://dx.doi.org/10.1016/j.bjid.2012.08.009 http://hdl.handle.net/11449/7515 |
Resumo: | Introduction: Rhodococcus equi is an opportunistic pathogen, causing rhodococcosis, a condition that can be confused with tuberculosis. Often, without identifying M. tuberculosis, physicians initiate empiric treatment for tuberculosis. R. equi and M. tuberculosis have different susceptibility to drugs. Identification of R. equi is based on a variety of phenotypic, chromatographic, and genotypic characteristics.Objective: This study aimed to characterize bacterial isolates from sputum samples suggestive of R. equi.Methods: The phenotypic identification included biochemical assays; thin-layer chromatography (TLC) and polymerase chain reaction (PCR) were used for genotypic identification.Results: Among 78 Gram-positive and partially acid-fast bacilli isolated from the sputum of tuberculosis-suspected patients, 51 were phenotypically and genotypically characterized as R. equi based on literature data. Mycolic acid analysis showed that all suspected R. equi had compounds with a retention factor (R-f) between 0.4-0.5. Genotypic characterization indicated the presence of the choE gene 959 bp fragments in 51 isolates CAMP test positive. Twenty-two CAMP test negative isolates were negative for the choE gene. Five isolates presumptively identified as R. equi, CAMP test positive, were choE gene negative, and probably belonged to other bacterial species.Conclusions: The phenotypic and molecular techniques used constitute a good methodological tool to identify R. equi. (C) 2012 Elsevier Editora All rights reserved. |
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Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputumPolymerase chain reactionRhodococcus equiMycolic acidsIntroduction: Rhodococcus equi is an opportunistic pathogen, causing rhodococcosis, a condition that can be confused with tuberculosis. Often, without identifying M. tuberculosis, physicians initiate empiric treatment for tuberculosis. R. equi and M. tuberculosis have different susceptibility to drugs. Identification of R. equi is based on a variety of phenotypic, chromatographic, and genotypic characteristics.Objective: This study aimed to characterize bacterial isolates from sputum samples suggestive of R. equi.Methods: The phenotypic identification included biochemical assays; thin-layer chromatography (TLC) and polymerase chain reaction (PCR) were used for genotypic identification.Results: Among 78 Gram-positive and partially acid-fast bacilli isolated from the sputum of tuberculosis-suspected patients, 51 were phenotypically and genotypically characterized as R. equi based on literature data. Mycolic acid analysis showed that all suspected R. equi had compounds with a retention factor (R-f) between 0.4-0.5. Genotypic characterization indicated the presence of the choE gene 959 bp fragments in 51 isolates CAMP test positive. Twenty-two CAMP test negative isolates were negative for the choE gene. Five isolates presumptively identified as R. equi, CAMP test positive, were choE gene negative, and probably belonged to other bacterial species.Conclusions: The phenotypic and molecular techniques used constitute a good methodological tool to identify R. equi. (C) 2012 Elsevier Editora All rights reserved.Adolfo Lutz Inst, Nucleo Ciencias Biomed, Ctr Lab Reg IAL NCB CLR 6, BR-14085410 Ribeirao Preto, SP, BrazilUniv Estadual Paulista Julio Mesquita Filho UNESP, Sch Pharmaceut Sci, Lab Micobacterias Prof Dr Hugo David, Araraquara, SP, BrazilUniv Estadual Paulista Julio Mesquita Filho UNESP, Sch Pharmaceut Sci, Lab Micobacterias Prof Dr Hugo David, Araraquara, SP, BrazilContextoInstituto Adolfo Lutz (IAL)Universidade Estadual Paulista (Unesp)da Silva, PauloBarreto Santos, Adolfo Carlos [UNESP]Sato, Daisy NakamuraSilva, Jaqueline OteroCazentini Medeiros, Marta InesMachado Carneiro, Ana Mariade Andrade Leite, Sergio RobertoLeite, Clarice Queico Fujimura [UNESP]2014-05-20T13:24:21Z2014-05-20T13:24:21Z2012-09-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article409-415application/pdfhttp://dx.doi.org/10.1016/j.bjid.2012.08.009Brazilian Journal of Infectious Diseases. Salvador: Contexto, v. 16, n. 5, p. 409-415, 2012.1413-8670http://hdl.handle.net/11449/751510.1016/j.bjid.2012.08.009WOS:000310088400001WOS000310088400001.pdf2114570774349859Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Journal of Infectious Diseases2.0830,817info:eu-repo/semantics/openAccess2024-06-24T13:08:01Zoai:repositorio.unesp.br:11449/7515Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:42:32.169648Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum |
title |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum |
spellingShingle |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum da Silva, Paulo Polymerase chain reaction Rhodococcus equi Mycolic acids da Silva, Paulo Polymerase chain reaction Rhodococcus equi Mycolic acids |
title_short |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum |
title_full |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum |
title_fullStr |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum |
title_full_unstemmed |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum |
title_sort |
Phenotypic and genotypic characterization of Rhodococcus equi isolated from sputum |
author |
da Silva, Paulo |
author_facet |
da Silva, Paulo da Silva, Paulo Barreto Santos, Adolfo Carlos [UNESP] Sato, Daisy Nakamura Silva, Jaqueline Otero Cazentini Medeiros, Marta Ines Machado Carneiro, Ana Maria de Andrade Leite, Sergio Roberto Leite, Clarice Queico Fujimura [UNESP] Barreto Santos, Adolfo Carlos [UNESP] Sato, Daisy Nakamura Silva, Jaqueline Otero Cazentini Medeiros, Marta Ines Machado Carneiro, Ana Maria de Andrade Leite, Sergio Roberto Leite, Clarice Queico Fujimura [UNESP] |
author_role |
author |
author2 |
Barreto Santos, Adolfo Carlos [UNESP] Sato, Daisy Nakamura Silva, Jaqueline Otero Cazentini Medeiros, Marta Ines Machado Carneiro, Ana Maria de Andrade Leite, Sergio Roberto Leite, Clarice Queico Fujimura [UNESP] |
author2_role |
author author author author author author author |
dc.contributor.none.fl_str_mv |
Instituto Adolfo Lutz (IAL) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
da Silva, Paulo Barreto Santos, Adolfo Carlos [UNESP] Sato, Daisy Nakamura Silva, Jaqueline Otero Cazentini Medeiros, Marta Ines Machado Carneiro, Ana Maria de Andrade Leite, Sergio Roberto Leite, Clarice Queico Fujimura [UNESP] |
dc.subject.por.fl_str_mv |
Polymerase chain reaction Rhodococcus equi Mycolic acids |
topic |
Polymerase chain reaction Rhodococcus equi Mycolic acids |
description |
Introduction: Rhodococcus equi is an opportunistic pathogen, causing rhodococcosis, a condition that can be confused with tuberculosis. Often, without identifying M. tuberculosis, physicians initiate empiric treatment for tuberculosis. R. equi and M. tuberculosis have different susceptibility to drugs. Identification of R. equi is based on a variety of phenotypic, chromatographic, and genotypic characteristics.Objective: This study aimed to characterize bacterial isolates from sputum samples suggestive of R. equi.Methods: The phenotypic identification included biochemical assays; thin-layer chromatography (TLC) and polymerase chain reaction (PCR) were used for genotypic identification.Results: Among 78 Gram-positive and partially acid-fast bacilli isolated from the sputum of tuberculosis-suspected patients, 51 were phenotypically and genotypically characterized as R. equi based on literature data. Mycolic acid analysis showed that all suspected R. equi had compounds with a retention factor (R-f) between 0.4-0.5. Genotypic characterization indicated the presence of the choE gene 959 bp fragments in 51 isolates CAMP test positive. Twenty-two CAMP test negative isolates were negative for the choE gene. Five isolates presumptively identified as R. equi, CAMP test positive, were choE gene negative, and probably belonged to other bacterial species.Conclusions: The phenotypic and molecular techniques used constitute a good methodological tool to identify R. equi. (C) 2012 Elsevier Editora All rights reserved. |
publishDate |
2012 |
dc.date.none.fl_str_mv |
2012-09-01 2014-05-20T13:24:21Z 2014-05-20T13:24:21Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.bjid.2012.08.009 Brazilian Journal of Infectious Diseases. Salvador: Contexto, v. 16, n. 5, p. 409-415, 2012. 1413-8670 http://hdl.handle.net/11449/7515 10.1016/j.bjid.2012.08.009 WOS:000310088400001 WOS000310088400001.pdf 2114570774349859 |
url |
http://dx.doi.org/10.1016/j.bjid.2012.08.009 http://hdl.handle.net/11449/7515 |
identifier_str_mv |
Brazilian Journal of Infectious Diseases. Salvador: Contexto, v. 16, n. 5, p. 409-415, 2012. 1413-8670 10.1016/j.bjid.2012.08.009 WOS:000310088400001 WOS000310088400001.pdf 2114570774349859 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Brazilian Journal of Infectious Diseases 2.083 0,817 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
409-415 application/pdf |
dc.publisher.none.fl_str_mv |
Contexto |
publisher.none.fl_str_mv |
Contexto |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1822229024506642432 |
dc.identifier.doi.none.fl_str_mv |
10.1016/j.bjid.2012.08.009 |