Reactivation of multiple fetal mirnas in lung adenocarcinoma
Autor(a) principal: | |
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Data de Publicação: | 2021 |
Outros Autores: | , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.3390/cancers13112686 http://hdl.handle.net/11449/206405 |
Resumo: | MicroRNAs (miRNAs) play vital roles in the regulation of normal developmental pathways. However, cancer cells can co-opt these miRNAs, and the pathways that they regulate, to drive pro-tumourigenic phenotypes. Characterization of the miRNA transcriptomes of fetal organs is essential for identifying these oncofetal miRNAs, but it has been limited by fetal sample availability. As oncofetal miRNAs are absent from healthy adult lungs, they represent ideal targets for developing diagnostic and therapeutic strategies. We conducted small RNA sequencing of a rare collection of 25 human fetal lung (FL) samples and compared them to two independent cohorts (n = 140, n = 427), each comprised of adult non-neoplastic lung (ANL) and lung adenocarcinoma (LUAD) samples. We identified 13 oncofetal miRNAs that were expressed in FL and LUAD but not in ANL. These oncofetal miRNAs are potential biomarkers for LUAD detection (AUC = 0.963). Five of these miRNAs are derived from the imprinted C14MC miRNA cluster at the 14q32 locus, which has been associated with cancer development and abnormal fetal and placental development. Additionally, we observed the pulmonary expression of 44 previously unannotated miRNAs. The sequencing of these fetal lung samples also provides a baseline resource against which aberrant samples can be compared. |
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Repositório Institucional da UNESP |
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Reactivation of multiple fetal mirnas in lung adenocarcinomaLung adenocarcinomaMicroRNANovel microRNAOncofetalMicroRNAs (miRNAs) play vital roles in the regulation of normal developmental pathways. However, cancer cells can co-opt these miRNAs, and the pathways that they regulate, to drive pro-tumourigenic phenotypes. Characterization of the miRNA transcriptomes of fetal organs is essential for identifying these oncofetal miRNAs, but it has been limited by fetal sample availability. As oncofetal miRNAs are absent from healthy adult lungs, they represent ideal targets for developing diagnostic and therapeutic strategies. We conducted small RNA sequencing of a rare collection of 25 human fetal lung (FL) samples and compared them to two independent cohorts (n = 140, n = 427), each comprised of adult non-neoplastic lung (ANL) and lung adenocarcinoma (LUAD) samples. We identified 13 oncofetal miRNAs that were expressed in FL and LUAD but not in ANL. These oncofetal miRNAs are potential biomarkers for LUAD detection (AUC = 0.963). Five of these miRNAs are derived from the imprinted C14MC miRNA cluster at the 14q32 locus, which has been associated with cancer development and abnormal fetal and placental development. Additionally, we observed the pulmonary expression of 44 previously unannotated miRNAs. The sequencing of these fetal lung samples also provides a baseline resource against which aberrant samples can be compared.Krembil FoundationCanada Foundation for InnovationNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchBritish Columbia Cancer Research CentreInternational Research Center A.C. Camargo Cancer CenterNYU Langone Medical CenterBritish Columbia Children’s Hospital Research InstituteDepartment of Medical Genetics University of British ColumbiaDivision of Orthopedic Surgery Schroeder Arthritis Institute University Health NetworkData Science Discovery Centre for Chronic Diseases Krembil Research Institute University Health NetworkDepartment of Medical Biophysics University of TorontoDepartment of Computer Science University of TorontoFaculty of Medicine São Paulo State University (UNESP)Faculty of Medicine São Paulo State University (UNESP)Canada Foundation for Innovation: 203373Natural Sciences and Engineering Research Council of Canada: 203475Canada Foundation for Innovation: 30865Canadian Institutes of Health Research: FDN-143345British Columbia Cancer Research CentreA.C. Camargo Cancer CenterNYU Langone Medical CenterBritish Columbia Children’s Hospital Research InstituteUniversity of British ColumbiaUniversity Health NetworkUniversity of TorontoUniversidade Estadual Paulista (Unesp)Cohn, David E.Barros-Filho, Mateus C.Minatel, Brenda C.Pewarchuk, Michelle E.Marshall, Erin A.Vucic, Emily A.Sage, Adam P.Telkar, NikitaStewart, Greg L.Jurisica, IgorReis, Patricia P. [UNESP]Robinson, Wendy P.Lam, Wan L.2021-06-25T10:31:29Z2021-06-25T10:31:29Z2021-06-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.3390/cancers13112686Cancers, v. 13, n. 11, 2021.2072-6694http://hdl.handle.net/11449/20640510.3390/cancers131126862-s2.0-85106732971Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengCancersinfo:eu-repo/semantics/openAccess2021-10-22T22:24:09Zoai:repositorio.unesp.br:11449/206405Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:32:23.397847Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Reactivation of multiple fetal mirnas in lung adenocarcinoma |
title |
Reactivation of multiple fetal mirnas in lung adenocarcinoma |
spellingShingle |
Reactivation of multiple fetal mirnas in lung adenocarcinoma Cohn, David E. Lung adenocarcinoma MicroRNA Novel microRNA Oncofetal |
title_short |
Reactivation of multiple fetal mirnas in lung adenocarcinoma |
title_full |
Reactivation of multiple fetal mirnas in lung adenocarcinoma |
title_fullStr |
Reactivation of multiple fetal mirnas in lung adenocarcinoma |
title_full_unstemmed |
Reactivation of multiple fetal mirnas in lung adenocarcinoma |
title_sort |
Reactivation of multiple fetal mirnas in lung adenocarcinoma |
author |
Cohn, David E. |
author_facet |
Cohn, David E. Barros-Filho, Mateus C. Minatel, Brenda C. Pewarchuk, Michelle E. Marshall, Erin A. Vucic, Emily A. Sage, Adam P. Telkar, Nikita Stewart, Greg L. Jurisica, Igor Reis, Patricia P. [UNESP] Robinson, Wendy P. Lam, Wan L. |
author_role |
author |
author2 |
Barros-Filho, Mateus C. Minatel, Brenda C. Pewarchuk, Michelle E. Marshall, Erin A. Vucic, Emily A. Sage, Adam P. Telkar, Nikita Stewart, Greg L. Jurisica, Igor Reis, Patricia P. [UNESP] Robinson, Wendy P. Lam, Wan L. |
author2_role |
author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
British Columbia Cancer Research Centre A.C. Camargo Cancer Center NYU Langone Medical Center British Columbia Children’s Hospital Research Institute University of British Columbia University Health Network University of Toronto Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Cohn, David E. Barros-Filho, Mateus C. Minatel, Brenda C. Pewarchuk, Michelle E. Marshall, Erin A. Vucic, Emily A. Sage, Adam P. Telkar, Nikita Stewart, Greg L. Jurisica, Igor Reis, Patricia P. [UNESP] Robinson, Wendy P. Lam, Wan L. |
dc.subject.por.fl_str_mv |
Lung adenocarcinoma MicroRNA Novel microRNA Oncofetal |
topic |
Lung adenocarcinoma MicroRNA Novel microRNA Oncofetal |
description |
MicroRNAs (miRNAs) play vital roles in the regulation of normal developmental pathways. However, cancer cells can co-opt these miRNAs, and the pathways that they regulate, to drive pro-tumourigenic phenotypes. Characterization of the miRNA transcriptomes of fetal organs is essential for identifying these oncofetal miRNAs, but it has been limited by fetal sample availability. As oncofetal miRNAs are absent from healthy adult lungs, they represent ideal targets for developing diagnostic and therapeutic strategies. We conducted small RNA sequencing of a rare collection of 25 human fetal lung (FL) samples and compared them to two independent cohorts (n = 140, n = 427), each comprised of adult non-neoplastic lung (ANL) and lung adenocarcinoma (LUAD) samples. We identified 13 oncofetal miRNAs that were expressed in FL and LUAD but not in ANL. These oncofetal miRNAs are potential biomarkers for LUAD detection (AUC = 0.963). Five of these miRNAs are derived from the imprinted C14MC miRNA cluster at the 14q32 locus, which has been associated with cancer development and abnormal fetal and placental development. Additionally, we observed the pulmonary expression of 44 previously unannotated miRNAs. The sequencing of these fetal lung samples also provides a baseline resource against which aberrant samples can be compared. |
publishDate |
2021 |
dc.date.none.fl_str_mv |
2021-06-25T10:31:29Z 2021-06-25T10:31:29Z 2021-06-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.3390/cancers13112686 Cancers, v. 13, n. 11, 2021. 2072-6694 http://hdl.handle.net/11449/206405 10.3390/cancers13112686 2-s2.0-85106732971 |
url |
http://dx.doi.org/10.3390/cancers13112686 http://hdl.handle.net/11449/206405 |
identifier_str_mv |
Cancers, v. 13, n. 11, 2021. 2072-6694 10.3390/cancers13112686 2-s2.0-85106732971 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Cancers |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129082481704960 |