Dynamics of archaeal community in soil with application of composted tannery sludge
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1038/s41598-019-43478-y http://hdl.handle.net/11449/190338 |
Resumo: | Application of composted tannery sludge (CTS) could promote a shift in the structure of soil microbial communities. Although the effect of CTS on bacterial community has been studied, it is unclear how the composition and diversity of archaeal community respond to CTS amendment and which environmental factors drive the community over time. Here, we hypothesize that the Archaea structure and composition respond to CTS amendment over the time. CTS had been previously applied annually along 6 years and this assessment occurred for 180 days following the application in the 7 th year by using different rates (0, 2.5, 5, 10 and 20 ton ha −1 ). We used amplicon 16S rRNA sequencing to assess the changes in the structure of the archaeal community. Thaumarchaeota and Euryarchaeota were the most abundant phyla found in soils with application of CTS, with Thaumarchaeota dominating the sequences in all samples with relative abundances of >98%. We observed a decreasing trend on the archaeal diversity over the time with increasing CTS application rate, together with an increase in the community similarity. The redundancy analyses (RDA) explained 43% of the total variation in operational taxonomic units and identified Na, pH, Cr and P as the main drivers of the archaeal community over time after application of highest CTS rates. CTS application changes the structure of Archaea community, with significant increase of Thaumarchaeota and Aenigmarchaeota groups, which can be further explored for its biotechnological use in contaminated soils. |
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Dynamics of archaeal community in soil with application of composted tannery sludgeApplication of composted tannery sludge (CTS) could promote a shift in the structure of soil microbial communities. Although the effect of CTS on bacterial community has been studied, it is unclear how the composition and diversity of archaeal community respond to CTS amendment and which environmental factors drive the community over time. Here, we hypothesize that the Archaea structure and composition respond to CTS amendment over the time. CTS had been previously applied annually along 6 years and this assessment occurred for 180 days following the application in the 7 th year by using different rates (0, 2.5, 5, 10 and 20 ton ha −1 ). We used amplicon 16S rRNA sequencing to assess the changes in the structure of the archaeal community. Thaumarchaeota and Euryarchaeota were the most abundant phyla found in soils with application of CTS, with Thaumarchaeota dominating the sequences in all samples with relative abundances of >98%. We observed a decreasing trend on the archaeal diversity over the time with increasing CTS application rate, together with an increase in the community similarity. The redundancy analyses (RDA) explained 43% of the total variation in operational taxonomic units and identified Na, pH, Cr and P as the main drivers of the archaeal community over time after application of highest CTS rates. CTS application changes the structure of Archaea community, with significant increase of Thaumarchaeota and Aenigmarchaeota groups, which can be further explored for its biotechnological use in contaminated soils.Federal University of Piauí Department of Agricultural Engineering and Soil ScienceLaboratory of Molecular Ecology CENA-USPFederal University of Ceará LembiotechSão Paulo State University (Unesp) School of Agricultural and Veterinarian Sciences, Path of Access Prof. Paulo Donato Castellane, Km 5, Postal Code: 14884-900University of Brazil: University campus Descalvado - Hilário da Silva Passos Avenue, 950 - University parkWageningen University Aquatic Ecology and Water Quality Management Group, P.O. Box 47Wageningen Environmental Research, P.O. Box 47São Paulo State University (Unesp) School of Agricultural and Veterinarian Sciences, Path of Access Prof. Paulo Donato Castellane, Km 5, Postal Code: 14884-900Federal University of PiauíUniversidade de São Paulo (USP)LembiotechUniversidade Estadual Paulista (Unesp)University of Brazil: University campus Descalvado - Hilário da Silva Passos AvenueAquatic Ecology and Water Quality Management GroupWageningen Environmental ResearchMiranda, Ana Roberta LimaMendes, Lucas WilliamLemos, Leandro NascimentoAntunes, Jadson Emanuel LopesAmorim, Marineide RodriguesMelo, Vania Maria Macielde Melo, Wanderley Jose [UNESP]Van den Brink, Paul J.Araujo, Ademir Sergio Ferreira2019-10-06T17:09:57Z2019-10-06T17:09:57Z2019-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-019-43478-yScientific Reports, v. 9, n. 1, 2019.2045-2322http://hdl.handle.net/11449/19033810.1038/s41598-019-43478-y2-s2.0-85065783583Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2024-06-07T15:31:34Zoai:repositorio.unesp.br:11449/190338Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T15:54:41.376875Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Dynamics of archaeal community in soil with application of composted tannery sludge |
title |
Dynamics of archaeal community in soil with application of composted tannery sludge |
spellingShingle |
Dynamics of archaeal community in soil with application of composted tannery sludge Miranda, Ana Roberta Lima |
title_short |
Dynamics of archaeal community in soil with application of composted tannery sludge |
title_full |
Dynamics of archaeal community in soil with application of composted tannery sludge |
title_fullStr |
Dynamics of archaeal community in soil with application of composted tannery sludge |
title_full_unstemmed |
Dynamics of archaeal community in soil with application of composted tannery sludge |
title_sort |
Dynamics of archaeal community in soil with application of composted tannery sludge |
author |
Miranda, Ana Roberta Lima |
author_facet |
Miranda, Ana Roberta Lima Mendes, Lucas William Lemos, Leandro Nascimento Antunes, Jadson Emanuel Lopes Amorim, Marineide Rodrigues Melo, Vania Maria Maciel de Melo, Wanderley Jose [UNESP] Van den Brink, Paul J. Araujo, Ademir Sergio Ferreira |
author_role |
author |
author2 |
Mendes, Lucas William Lemos, Leandro Nascimento Antunes, Jadson Emanuel Lopes Amorim, Marineide Rodrigues Melo, Vania Maria Maciel de Melo, Wanderley Jose [UNESP] Van den Brink, Paul J. Araujo, Ademir Sergio Ferreira |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
Federal University of Piauí Universidade de São Paulo (USP) Lembiotech Universidade Estadual Paulista (Unesp) University of Brazil: University campus Descalvado - Hilário da Silva Passos Avenue Aquatic Ecology and Water Quality Management Group Wageningen Environmental Research |
dc.contributor.author.fl_str_mv |
Miranda, Ana Roberta Lima Mendes, Lucas William Lemos, Leandro Nascimento Antunes, Jadson Emanuel Lopes Amorim, Marineide Rodrigues Melo, Vania Maria Maciel de Melo, Wanderley Jose [UNESP] Van den Brink, Paul J. Araujo, Ademir Sergio Ferreira |
description |
Application of composted tannery sludge (CTS) could promote a shift in the structure of soil microbial communities. Although the effect of CTS on bacterial community has been studied, it is unclear how the composition and diversity of archaeal community respond to CTS amendment and which environmental factors drive the community over time. Here, we hypothesize that the Archaea structure and composition respond to CTS amendment over the time. CTS had been previously applied annually along 6 years and this assessment occurred for 180 days following the application in the 7 th year by using different rates (0, 2.5, 5, 10 and 20 ton ha −1 ). We used amplicon 16S rRNA sequencing to assess the changes in the structure of the archaeal community. Thaumarchaeota and Euryarchaeota were the most abundant phyla found in soils with application of CTS, with Thaumarchaeota dominating the sequences in all samples with relative abundances of >98%. We observed a decreasing trend on the archaeal diversity over the time with increasing CTS application rate, together with an increase in the community similarity. The redundancy analyses (RDA) explained 43% of the total variation in operational taxonomic units and identified Na, pH, Cr and P as the main drivers of the archaeal community over time after application of highest CTS rates. CTS application changes the structure of Archaea community, with significant increase of Thaumarchaeota and Aenigmarchaeota groups, which can be further explored for its biotechnological use in contaminated soils. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T17:09:57Z 2019-10-06T17:09:57Z 2019-12-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1038/s41598-019-43478-y Scientific Reports, v. 9, n. 1, 2019. 2045-2322 http://hdl.handle.net/11449/190338 10.1038/s41598-019-43478-y 2-s2.0-85065783583 |
url |
http://dx.doi.org/10.1038/s41598-019-43478-y http://hdl.handle.net/11449/190338 |
identifier_str_mv |
Scientific Reports, v. 9, n. 1, 2019. 2045-2322 10.1038/s41598-019-43478-y 2-s2.0-85065783583 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Scientific Reports |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808128581810782208 |