Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
DOI: | 10.1139/gen-2015-0112 |
Texto Completo: | http://dx.doi.org/10.1139/gen-2015-0112 http://hdl.handle.net/11449/168469 |
Resumo: | The genus Astyanax is widely distributed from the southern United States to northern Patagonia, Argentina. While cytogenetic studies have been performed for this genus, little is known about the histone gene families. The aim of this study was to examine the chromosomal relationships among the different species of Astyanax. The chromosomal locations of the 5S rRNA and H3 histone genes were determined in A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, A. mexicanus (all 2n = 50), A. fasciatus (2n = 46), and A. schubarti (2n = 36). All eight species exhibited H3 histone clusters on two chromosome pairs. In six species (A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, and A. fasciatus), syntenic clusters of H3 histone and 5S rDNA were observed on metacentric (m) or submetacentric (sm) chromosomes. In seven species, clusters of 5S rDNA sequences were located on one or two chromosome pairs. In A. mexicanus, 5S rDNA clusters were located on four chromosome pairs. This study demonstrates that H3 histone clusters are conserved on two chromosome pairs in the genus Astyanax, and specific chromosomal features may contribute to the genomic organization of the H3 histone and 5S rRNA genes. |
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Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genesAstyanax schubartiFISHKaryotype evolutionMexican blind cavefishRepetitive DNAsThe genus Astyanax is widely distributed from the southern United States to northern Patagonia, Argentina. While cytogenetic studies have been performed for this genus, little is known about the histone gene families. The aim of this study was to examine the chromosomal relationships among the different species of Astyanax. The chromosomal locations of the 5S rRNA and H3 histone genes were determined in A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, A. mexicanus (all 2n = 50), A. fasciatus (2n = 46), and A. schubarti (2n = 36). All eight species exhibited H3 histone clusters on two chromosome pairs. In six species (A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, and A. fasciatus), syntenic clusters of H3 histone and 5S rDNA were observed on metacentric (m) or submetacentric (sm) chromosomes. In seven species, clusters of 5S rDNA sequences were located on one or two chromosome pairs. In A. mexicanus, 5S rDNA clusters were located on four chromosome pairs. This study demonstrates that H3 histone clusters are conserved on two chromosome pairs in the genus Astyanax, and specific chromosomal features may contribute to the genomic organization of the H3 histone and 5S rRNA genes.Instituto de Biociências Departamento de Biologia Laboratório de Citogenética Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Av. 24A, 1515Instituto de Biociências Departamento de Biologia Laboratório de Citogenética Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Av. 24A, 1515Universidade Estadual Paulista (Unesp)Piscor, Diovani [UNESP]Parise-Maltempi, Patricia Pasquali [UNESP]2018-12-11T16:41:24Z2018-12-11T16:41:24Z2016-01-17info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article167-172application/pdfhttp://dx.doi.org/10.1139/gen-2015-0112Genome, v. 59, n. 3, p. 167-172, 2016.0831-2796http://hdl.handle.net/11449/16846910.1139/gen-2015-01122-s2.0-849603988222-s2.0-84960398822.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenome0,655info:eu-repo/semantics/openAccess2023-12-10T06:15:55Zoai:repositorio.unesp.br:11449/168469Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:53:44.064415Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes |
title |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes |
spellingShingle |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes Piscor, Diovani [UNESP] Astyanax schubarti FISH Karyotype evolution Mexican blind cavefish Repetitive DNAs Piscor, Diovani [UNESP] Astyanax schubarti FISH Karyotype evolution Mexican blind cavefish Repetitive DNAs |
title_short |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes |
title_full |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes |
title_fullStr |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes |
title_full_unstemmed |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes |
title_sort |
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes |
author |
Piscor, Diovani [UNESP] |
author_facet |
Piscor, Diovani [UNESP] Piscor, Diovani [UNESP] Parise-Maltempi, Patricia Pasquali [UNESP] Parise-Maltempi, Patricia Pasquali [UNESP] |
author_role |
author |
author2 |
Parise-Maltempi, Patricia Pasquali [UNESP] |
author2_role |
author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Piscor, Diovani [UNESP] Parise-Maltempi, Patricia Pasquali [UNESP] |
dc.subject.por.fl_str_mv |
Astyanax schubarti FISH Karyotype evolution Mexican blind cavefish Repetitive DNAs |
topic |
Astyanax schubarti FISH Karyotype evolution Mexican blind cavefish Repetitive DNAs |
description |
The genus Astyanax is widely distributed from the southern United States to northern Patagonia, Argentina. While cytogenetic studies have been performed for this genus, little is known about the histone gene families. The aim of this study was to examine the chromosomal relationships among the different species of Astyanax. The chromosomal locations of the 5S rRNA and H3 histone genes were determined in A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, A. mexicanus (all 2n = 50), A. fasciatus (2n = 46), and A. schubarti (2n = 36). All eight species exhibited H3 histone clusters on two chromosome pairs. In six species (A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, and A. fasciatus), syntenic clusters of H3 histone and 5S rDNA were observed on metacentric (m) or submetacentric (sm) chromosomes. In seven species, clusters of 5S rDNA sequences were located on one or two chromosome pairs. In A. mexicanus, 5S rDNA clusters were located on four chromosome pairs. This study demonstrates that H3 histone clusters are conserved on two chromosome pairs in the genus Astyanax, and specific chromosomal features may contribute to the genomic organization of the H3 histone and 5S rRNA genes. |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-01-17 2018-12-11T16:41:24Z 2018-12-11T16:41:24Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1139/gen-2015-0112 Genome, v. 59, n. 3, p. 167-172, 2016. 0831-2796 http://hdl.handle.net/11449/168469 10.1139/gen-2015-0112 2-s2.0-84960398822 2-s2.0-84960398822.pdf |
url |
http://dx.doi.org/10.1139/gen-2015-0112 http://hdl.handle.net/11449/168469 |
identifier_str_mv |
Genome, v. 59, n. 3, p. 167-172, 2016. 0831-2796 10.1139/gen-2015-0112 2-s2.0-84960398822 2-s2.0-84960398822.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genome 0,655 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
167-172 application/pdf |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1822182365803315200 |
dc.identifier.doi.none.fl_str_mv |
10.1139/gen-2015-0112 |