Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes

Detalhes bibliográficos
Autor(a) principal: Piscor, Diovani [UNESP]
Data de Publicação: 2016
Outros Autores: Parise-Maltempi, Patricia Pasquali [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
DOI: 10.1139/gen-2015-0112
Texto Completo: http://dx.doi.org/10.1139/gen-2015-0112
http://hdl.handle.net/11449/168469
Resumo: The genus Astyanax is widely distributed from the southern United States to northern Patagonia, Argentina. While cytogenetic studies have been performed for this genus, little is known about the histone gene families. The aim of this study was to examine the chromosomal relationships among the different species of Astyanax. The chromosomal locations of the 5S rRNA and H3 histone genes were determined in A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, A. mexicanus (all 2n = 50), A. fasciatus (2n = 46), and A. schubarti (2n = 36). All eight species exhibited H3 histone clusters on two chromosome pairs. In six species (A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, and A. fasciatus), syntenic clusters of H3 histone and 5S rDNA were observed on metacentric (m) or submetacentric (sm) chromosomes. In seven species, clusters of 5S rDNA sequences were located on one or two chromosome pairs. In A. mexicanus, 5S rDNA clusters were located on four chromosome pairs. This study demonstrates that H3 histone clusters are conserved on two chromosome pairs in the genus Astyanax, and specific chromosomal features may contribute to the genomic organization of the H3 histone and 5S rRNA genes.
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spelling Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genesAstyanax schubartiFISHKaryotype evolutionMexican blind cavefishRepetitive DNAsThe genus Astyanax is widely distributed from the southern United States to northern Patagonia, Argentina. While cytogenetic studies have been performed for this genus, little is known about the histone gene families. The aim of this study was to examine the chromosomal relationships among the different species of Astyanax. The chromosomal locations of the 5S rRNA and H3 histone genes were determined in A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, A. mexicanus (all 2n = 50), A. fasciatus (2n = 46), and A. schubarti (2n = 36). All eight species exhibited H3 histone clusters on two chromosome pairs. In six species (A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, and A. fasciatus), syntenic clusters of H3 histone and 5S rDNA were observed on metacentric (m) or submetacentric (sm) chromosomes. In seven species, clusters of 5S rDNA sequences were located on one or two chromosome pairs. In A. mexicanus, 5S rDNA clusters were located on four chromosome pairs. This study demonstrates that H3 histone clusters are conserved on two chromosome pairs in the genus Astyanax, and specific chromosomal features may contribute to the genomic organization of the H3 histone and 5S rRNA genes.Instituto de Biociências Departamento de Biologia Laboratório de Citogenética Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Av. 24A, 1515Instituto de Biociências Departamento de Biologia Laboratório de Citogenética Universidade Estadual Paulista Júlio de Mesquita Filho (UNESP), Av. 24A, 1515Universidade Estadual Paulista (Unesp)Piscor, Diovani [UNESP]Parise-Maltempi, Patricia Pasquali [UNESP]2018-12-11T16:41:24Z2018-12-11T16:41:24Z2016-01-17info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article167-172application/pdfhttp://dx.doi.org/10.1139/gen-2015-0112Genome, v. 59, n. 3, p. 167-172, 2016.0831-2796http://hdl.handle.net/11449/16846910.1139/gen-2015-01122-s2.0-849603988222-s2.0-84960398822.pdfScopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenome0,655info:eu-repo/semantics/openAccess2023-12-10T06:15:55Zoai:repositorio.unesp.br:11449/168469Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:53:44.064415Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
title Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
spellingShingle Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
Piscor, Diovani [UNESP]
Astyanax schubarti
FISH
Karyotype evolution
Mexican blind cavefish
Repetitive DNAs
Piscor, Diovani [UNESP]
Astyanax schubarti
FISH
Karyotype evolution
Mexican blind cavefish
Repetitive DNAs
title_short Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
title_full Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
title_fullStr Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
title_full_unstemmed Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
title_sort Chromosomal mapping of H3 histone and 5S rRNA genes in eight species of Astyanax (Pisces, Characiformes) with different diploid numbers: Syntenic conservation of repetitive genes
author Piscor, Diovani [UNESP]
author_facet Piscor, Diovani [UNESP]
Piscor, Diovani [UNESP]
Parise-Maltempi, Patricia Pasquali [UNESP]
Parise-Maltempi, Patricia Pasquali [UNESP]
author_role author
author2 Parise-Maltempi, Patricia Pasquali [UNESP]
author2_role author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Piscor, Diovani [UNESP]
Parise-Maltempi, Patricia Pasquali [UNESP]
dc.subject.por.fl_str_mv Astyanax schubarti
FISH
Karyotype evolution
Mexican blind cavefish
Repetitive DNAs
topic Astyanax schubarti
FISH
Karyotype evolution
Mexican blind cavefish
Repetitive DNAs
description The genus Astyanax is widely distributed from the southern United States to northern Patagonia, Argentina. While cytogenetic studies have been performed for this genus, little is known about the histone gene families. The aim of this study was to examine the chromosomal relationships among the different species of Astyanax. The chromosomal locations of the 5S rRNA and H3 histone genes were determined in A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, A. mexicanus (all 2n = 50), A. fasciatus (2n = 46), and A. schubarti (2n = 36). All eight species exhibited H3 histone clusters on two chromosome pairs. In six species (A. abramis, A. asuncionensis, A. altiparanae, A. bockmanni, A. eigenmanniorum, and A. fasciatus), syntenic clusters of H3 histone and 5S rDNA were observed on metacentric (m) or submetacentric (sm) chromosomes. In seven species, clusters of 5S rDNA sequences were located on one or two chromosome pairs. In A. mexicanus, 5S rDNA clusters were located on four chromosome pairs. This study demonstrates that H3 histone clusters are conserved on two chromosome pairs in the genus Astyanax, and specific chromosomal features may contribute to the genomic organization of the H3 histone and 5S rRNA genes.
publishDate 2016
dc.date.none.fl_str_mv 2016-01-17
2018-12-11T16:41:24Z
2018-12-11T16:41:24Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1139/gen-2015-0112
Genome, v. 59, n. 3, p. 167-172, 2016.
0831-2796
http://hdl.handle.net/11449/168469
10.1139/gen-2015-0112
2-s2.0-84960398822
2-s2.0-84960398822.pdf
url http://dx.doi.org/10.1139/gen-2015-0112
http://hdl.handle.net/11449/168469
identifier_str_mv Genome, v. 59, n. 3, p. 167-172, 2016.
0831-2796
10.1139/gen-2015-0112
2-s2.0-84960398822
2-s2.0-84960398822.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genome
0,655
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 167-172
application/pdf
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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dc.identifier.doi.none.fl_str_mv 10.1139/gen-2015-0112