Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values

Detalhes bibliográficos
Autor(a) principal: Freitas, Luara Afonso de [UNESP]
Data de Publicação: 2018
Outros Autores: Savegnago, Rodrigo Pelicioni [UNESP], Grupioni, Natalia Vinhal [UNESP], Ramos, Salvador Boccaletti, Stafuzza, Nedenia Bonvino [UNESP], Pereira de Figueiredo, Elsio Antonio, Schmidt, Gilberto Silber, Ledur, Monica Correa, Munari, Danisio Prado [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1080/09064702.2019.1580308
http://hdl.handle.net/11449/185827
Resumo: The aims of this study were to compare the suitability of the multi-trait (MUT) model to estimate genetic parameters with that of 13 reduced-rank principal component models (PC1 to PC13), and then to explore the additive genetic patterns of the breeding values obtained from these using clustering analyses of egg production traits. A total of 1,212 records were used to estimate genetic parameters using the MUT and PC models. The PC4 model was the best representation of the data since it had a lower AIC value and was more parsimonious than the MUT model. The estimated heritability of the age at the first egg (AFE) trait from this model was 0.28 +/- 0.06, and the estimated genetic correlation between AFE and total egg production (TP) was -0.52 +/- 0.23. Potentially animals from cluster 2 are more likely to be in the selected group to help improve the egg production.
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spelling Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding valuesGenetic correlationheritabilityk-meanslaying hensWard clusteringThe aims of this study were to compare the suitability of the multi-trait (MUT) model to estimate genetic parameters with that of 13 reduced-rank principal component models (PC1 to PC13), and then to explore the additive genetic patterns of the breeding values obtained from these using clustering analyses of egg production traits. A total of 1,212 records were used to estimate genetic parameters using the MUT and PC models. The PC4 model was the best representation of the data since it had a lower AIC value and was more parsimonious than the MUT model. The estimated heritability of the age at the first egg (AFE) trait from this model was 0.28 +/- 0.06, and the estimated genetic correlation between AFE and total egg production (TP) was -0.52 +/- 0.23. Potentially animals from cluster 2 are more likely to be in the selected group to help improve the egg production.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Univ Estadual Paulista, Fac Ciencias Agr & Vet, Dept Ciencias Exatas, Via Acesso Prof Paulo Donato Castellane S-N, BR-14884900 Jaboticabal, SP, BrazilUniv Franca, Programa Posgrad Promocao Saude, Franca, BrazilEmbrapa Suinos & Aves, Concordia, BrazilUniv Sao Paulo, Fac Med Ribeirao Preto, Dept Genet, Ribeirao Preto, BrazilCtr Pesquisa Bovinos Corte, Inst Zootecnia, Sertaozinho, BrazilUniv Estadual Paulista, Fac Ciencias Agr & Vet, Dept Ciencias Exatas, Via Acesso Prof Paulo Donato Castellane S-N, BR-14884900 Jaboticabal, SP, BrazilFAPESP: 2012/16087-5FAPESP: 2013/20091-0FAPESP: 2013/15422-4FAPESP: 2016/10583-1Taylor & Francis AsUniversidade Estadual Paulista (Unesp)Univ FrancaEmpresa Brasileira de Pesquisa Agropecuária (EMBRAPA)Universidade de São Paulo (USP)Ctr Pesquisa Bovinos CorteFreitas, Luara Afonso de [UNESP]Savegnago, Rodrigo Pelicioni [UNESP]Grupioni, Natalia Vinhal [UNESP]Ramos, Salvador BoccalettiStafuzza, Nedenia Bonvino [UNESP]Pereira de Figueiredo, Elsio AntonioSchmidt, Gilberto SilberLedur, Monica CorreaMunari, Danisio Prado [UNESP]2019-10-04T12:38:49Z2019-10-04T12:38:49Z2018-04-03info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article81-86http://dx.doi.org/10.1080/09064702.2019.1580308Acta Agriculturae Scandinavica Section A-animal Science. Oslo: Taylor & Francis As, v. 68, n. 2, p. 81-86, 2018.0906-4702http://hdl.handle.net/11449/18582710.1080/09064702.2019.1580308WOS:000472191800002Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengActa Agriculturae Scandinavica Section A-animal Scienceinfo:eu-repo/semantics/openAccess2024-06-06T13:44:11Zoai:repositorio.unesp.br:11449/185827Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T23:54:18.923271Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
title Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
spellingShingle Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
Freitas, Luara Afonso de [UNESP]
Genetic correlation
heritability
k-means
laying hens
Ward clustering
title_short Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
title_full Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
title_fullStr Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
title_full_unstemmed Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
title_sort Reduced-rank estimation of genetic parameters for egg production traits and cluster analyses with predicted breeding values
author Freitas, Luara Afonso de [UNESP]
author_facet Freitas, Luara Afonso de [UNESP]
Savegnago, Rodrigo Pelicioni [UNESP]
Grupioni, Natalia Vinhal [UNESP]
Ramos, Salvador Boccaletti
Stafuzza, Nedenia Bonvino [UNESP]
Pereira de Figueiredo, Elsio Antonio
Schmidt, Gilberto Silber
Ledur, Monica Correa
Munari, Danisio Prado [UNESP]
author_role author
author2 Savegnago, Rodrigo Pelicioni [UNESP]
Grupioni, Natalia Vinhal [UNESP]
Ramos, Salvador Boccaletti
Stafuzza, Nedenia Bonvino [UNESP]
Pereira de Figueiredo, Elsio Antonio
Schmidt, Gilberto Silber
Ledur, Monica Correa
Munari, Danisio Prado [UNESP]
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Univ Franca
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
Universidade de São Paulo (USP)
Ctr Pesquisa Bovinos Corte
dc.contributor.author.fl_str_mv Freitas, Luara Afonso de [UNESP]
Savegnago, Rodrigo Pelicioni [UNESP]
Grupioni, Natalia Vinhal [UNESP]
Ramos, Salvador Boccaletti
Stafuzza, Nedenia Bonvino [UNESP]
Pereira de Figueiredo, Elsio Antonio
Schmidt, Gilberto Silber
Ledur, Monica Correa
Munari, Danisio Prado [UNESP]
dc.subject.por.fl_str_mv Genetic correlation
heritability
k-means
laying hens
Ward clustering
topic Genetic correlation
heritability
k-means
laying hens
Ward clustering
description The aims of this study were to compare the suitability of the multi-trait (MUT) model to estimate genetic parameters with that of 13 reduced-rank principal component models (PC1 to PC13), and then to explore the additive genetic patterns of the breeding values obtained from these using clustering analyses of egg production traits. A total of 1,212 records were used to estimate genetic parameters using the MUT and PC models. The PC4 model was the best representation of the data since it had a lower AIC value and was more parsimonious than the MUT model. The estimated heritability of the age at the first egg (AFE) trait from this model was 0.28 +/- 0.06, and the estimated genetic correlation between AFE and total egg production (TP) was -0.52 +/- 0.23. Potentially animals from cluster 2 are more likely to be in the selected group to help improve the egg production.
publishDate 2018
dc.date.none.fl_str_mv 2018-04-03
2019-10-04T12:38:49Z
2019-10-04T12:38:49Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1080/09064702.2019.1580308
Acta Agriculturae Scandinavica Section A-animal Science. Oslo: Taylor & Francis As, v. 68, n. 2, p. 81-86, 2018.
0906-4702
http://hdl.handle.net/11449/185827
10.1080/09064702.2019.1580308
WOS:000472191800002
url http://dx.doi.org/10.1080/09064702.2019.1580308
http://hdl.handle.net/11449/185827
identifier_str_mv Acta Agriculturae Scandinavica Section A-animal Science. Oslo: Taylor & Francis As, v. 68, n. 2, p. 81-86, 2018.
0906-4702
10.1080/09064702.2019.1580308
WOS:000472191800002
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Acta Agriculturae Scandinavica Section A-animal Science
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 81-86
dc.publisher.none.fl_str_mv Taylor & Francis As
publisher.none.fl_str_mv Taylor & Francis As
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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