Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
Autor(a) principal: | |
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Data de Publicação: | 2011 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/S1415-47572011005000012 http://hdl.handle.net/11449/20483 |
Resumo: | Cross-amplification was tested and variability in microsatellite primers (designed for Neotropical parrots) compared, in five macaw species, viz., three endangered blue macaws (Cyanopsitta spixii [extinct in the wild], Anodorhynchus leari [endangered] and Anodorhynchus hyacinthinus [vulnerable]), and two unthreatened red macaws (Ara chloropterus and Ara macao). Among the primers tested, 84.6% successfully amplified products in C. spixii, 83.3% in A. leari, 76.4% in A. hyacinthinus, 78.6% in A. chloropterus and 71.4% in A. macao. The mean expected heterozygosity estimated for each species, and based on loci analyzed in all the five, ranged from 0.33 (A. hyacinthinus) to 0.85 (A. macao). As expected, the results revealed lower levels of genetic variability in threatened macaw species than in unthreatened. The low combined probability of genetic identity and the moderate to high potential for paternity exclusion, indicate the utility of the microsatellite loci set selected for each macaw species in kinship and population studies, thus constituting an aid in planning in-situ and ex-situ conservation. |
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Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservationconservationcross-amplificationmacawmicrosatellitePsittaciformesCross-amplification was tested and variability in microsatellite primers (designed for Neotropical parrots) compared, in five macaw species, viz., three endangered blue macaws (Cyanopsitta spixii [extinct in the wild], Anodorhynchus leari [endangered] and Anodorhynchus hyacinthinus [vulnerable]), and two unthreatened red macaws (Ara chloropterus and Ara macao). Among the primers tested, 84.6% successfully amplified products in C. spixii, 83.3% in A. leari, 76.4% in A. hyacinthinus, 78.6% in A. chloropterus and 71.4% in A. macao. The mean expected heterozygosity estimated for each species, and based on loci analyzed in all the five, ranged from 0.33 (A. hyacinthinus) to 0.85 (A. macao). As expected, the results revealed lower levels of genetic variability in threatened macaw species than in unthreatened. The low combined probability of genetic identity and the moderate to high potential for paternity exclusion, indicate the utility of the microsatellite loci set selected for each macaw species in kinship and population studies, thus constituting an aid in planning in-situ and ex-situ conservation.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Universidade de São Paulo Instituto de Biociências Departamento de Genética e Biologia EvolutivaUniversidade Federal de Goiás (UFG) Instituto de Ciências Biológicas Departamento de Biologia GeralUniversidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Departamento de EcologiaUniversidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Departamento de EcologiaSociedade Brasileira de GenéticaUniversidade de São Paulo (USP)Universidade Federal de Goiás (UFG)Universidade Estadual Paulista (Unesp)Presti, Flavia T.Oliveira-Marques, Adriana R.Caparroz, RenatoBiondo, Cibele [UNESP]Miyaki, Cristina Y.2013-09-30T20:08:47Z2014-05-20T13:57:26Z2013-09-30T20:08:47Z2014-05-20T13:57:26Z2011-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article348-352application/pdfhttp://dx.doi.org/10.1590/S1415-47572011005000012Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 34, n. 2, p. 348-352, 2011.1415-4757http://hdl.handle.net/11449/2048310.1590/S1415-47572011005000012S1415-47572011000200030WOS:000290865300030S1415-47572011000200030.pdfSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biology1.4930,638info:eu-repo/semantics/openAccess2023-11-21T06:08:13Zoai:repositorio.unesp.br:11449/20483Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:17:00.210653Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation |
title |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation |
spellingShingle |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation Presti, Flavia T. conservation cross-amplification macaw microsatellite Psittaciformes |
title_short |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation |
title_full |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation |
title_fullStr |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation |
title_full_unstemmed |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation |
title_sort |
Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation |
author |
Presti, Flavia T. |
author_facet |
Presti, Flavia T. Oliveira-Marques, Adriana R. Caparroz, Renato Biondo, Cibele [UNESP] Miyaki, Cristina Y. |
author_role |
author |
author2 |
Oliveira-Marques, Adriana R. Caparroz, Renato Biondo, Cibele [UNESP] Miyaki, Cristina Y. |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade de São Paulo (USP) Universidade Federal de Goiás (UFG) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Presti, Flavia T. Oliveira-Marques, Adriana R. Caparroz, Renato Biondo, Cibele [UNESP] Miyaki, Cristina Y. |
dc.subject.por.fl_str_mv |
conservation cross-amplification macaw microsatellite Psittaciformes |
topic |
conservation cross-amplification macaw microsatellite Psittaciformes |
description |
Cross-amplification was tested and variability in microsatellite primers (designed for Neotropical parrots) compared, in five macaw species, viz., three endangered blue macaws (Cyanopsitta spixii [extinct in the wild], Anodorhynchus leari [endangered] and Anodorhynchus hyacinthinus [vulnerable]), and two unthreatened red macaws (Ara chloropterus and Ara macao). Among the primers tested, 84.6% successfully amplified products in C. spixii, 83.3% in A. leari, 76.4% in A. hyacinthinus, 78.6% in A. chloropterus and 71.4% in A. macao. The mean expected heterozygosity estimated for each species, and based on loci analyzed in all the five, ranged from 0.33 (A. hyacinthinus) to 0.85 (A. macao). As expected, the results revealed lower levels of genetic variability in threatened macaw species than in unthreatened. The low combined probability of genetic identity and the moderate to high potential for paternity exclusion, indicate the utility of the microsatellite loci set selected for each macaw species in kinship and population studies, thus constituting an aid in planning in-situ and ex-situ conservation. |
publishDate |
2011 |
dc.date.none.fl_str_mv |
2011-01-01 2013-09-30T20:08:47Z 2013-09-30T20:08:47Z 2014-05-20T13:57:26Z 2014-05-20T13:57:26Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S1415-47572011005000012 Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 34, n. 2, p. 348-352, 2011. 1415-4757 http://hdl.handle.net/11449/20483 10.1590/S1415-47572011005000012 S1415-47572011000200030 WOS:000290865300030 S1415-47572011000200030.pdf |
url |
http://dx.doi.org/10.1590/S1415-47572011005000012 http://hdl.handle.net/11449/20483 |
identifier_str_mv |
Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 34, n. 2, p. 348-352, 2011. 1415-4757 10.1590/S1415-47572011005000012 S1415-47572011000200030 WOS:000290865300030 S1415-47572011000200030.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Biology 1.493 0,638 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
348-352 application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
SciELO reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128227396288512 |