Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation

Detalhes bibliográficos
Autor(a) principal: Presti, Flavia T.
Data de Publicação: 2011
Outros Autores: Oliveira-Marques, Adriana R., Caparroz, Renato, Biondo, Cibele [UNESP], Miyaki, Cristina Y.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/S1415-47572011005000012
http://hdl.handle.net/11449/20483
Resumo: Cross-amplification was tested and variability in microsatellite primers (designed for Neotropical parrots) compared, in five macaw species, viz., three endangered blue macaws (Cyanopsitta spixii [extinct in the wild], Anodorhynchus leari [endangered] and Anodorhynchus hyacinthinus [vulnerable]), and two unthreatened red macaws (Ara chloropterus and Ara macao). Among the primers tested, 84.6% successfully amplified products in C. spixii, 83.3% in A. leari, 76.4% in A. hyacinthinus, 78.6% in A. chloropterus and 71.4% in A. macao. The mean expected heterozygosity estimated for each species, and based on loci analyzed in all the five, ranged from 0.33 (A. hyacinthinus) to 0.85 (A. macao). As expected, the results revealed lower levels of genetic variability in threatened macaw species than in unthreatened. The low combined probability of genetic identity and the moderate to high potential for paternity exclusion, indicate the utility of the microsatellite loci set selected for each macaw species in kinship and population studies, thus constituting an aid in planning in-situ and ex-situ conservation.
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spelling Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservationconservationcross-amplificationmacawmicrosatellitePsittaciformesCross-amplification was tested and variability in microsatellite primers (designed for Neotropical parrots) compared, in five macaw species, viz., three endangered blue macaws (Cyanopsitta spixii [extinct in the wild], Anodorhynchus leari [endangered] and Anodorhynchus hyacinthinus [vulnerable]), and two unthreatened red macaws (Ara chloropterus and Ara macao). Among the primers tested, 84.6% successfully amplified products in C. spixii, 83.3% in A. leari, 76.4% in A. hyacinthinus, 78.6% in A. chloropterus and 71.4% in A. macao. The mean expected heterozygosity estimated for each species, and based on loci analyzed in all the five, ranged from 0.33 (A. hyacinthinus) to 0.85 (A. macao). As expected, the results revealed lower levels of genetic variability in threatened macaw species than in unthreatened. The low combined probability of genetic identity and the moderate to high potential for paternity exclusion, indicate the utility of the microsatellite loci set selected for each macaw species in kinship and population studies, thus constituting an aid in planning in-situ and ex-situ conservation.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Universidade de São Paulo Instituto de Biociências Departamento de Genética e Biologia EvolutivaUniversidade Federal de Goiás (UFG) Instituto de Ciências Biológicas Departamento de Biologia GeralUniversidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Departamento de EcologiaUniversidade Estadual Paulista Júlio de Mesquita Filho Instituto de Biociências Departamento de EcologiaSociedade Brasileira de GenéticaUniversidade de São Paulo (USP)Universidade Federal de Goiás (UFG)Universidade Estadual Paulista (Unesp)Presti, Flavia T.Oliveira-Marques, Adriana R.Caparroz, RenatoBiondo, Cibele [UNESP]Miyaki, Cristina Y.2013-09-30T20:08:47Z2014-05-20T13:57:26Z2013-09-30T20:08:47Z2014-05-20T13:57:26Z2011-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article348-352application/pdfhttp://dx.doi.org/10.1590/S1415-47572011005000012Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 34, n. 2, p. 348-352, 2011.1415-4757http://hdl.handle.net/11449/2048310.1590/S1415-47572011005000012S1415-47572011000200030WOS:000290865300030S1415-47572011000200030.pdfSciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biology1.4930,638info:eu-repo/semantics/openAccess2023-11-21T06:08:13Zoai:repositorio.unesp.br:11449/20483Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-11-21T06:08:13Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
title Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
spellingShingle Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
Presti, Flavia T.
conservation
cross-amplification
macaw
microsatellite
Psittaciformes
title_short Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
title_full Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
title_fullStr Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
title_full_unstemmed Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
title_sort Comparative analysis of microsatellite variability in five macaw species (Psittaciformes, Psittacidae): application for conservation
author Presti, Flavia T.
author_facet Presti, Flavia T.
Oliveira-Marques, Adriana R.
Caparroz, Renato
Biondo, Cibele [UNESP]
Miyaki, Cristina Y.
author_role author
author2 Oliveira-Marques, Adriana R.
Caparroz, Renato
Biondo, Cibele [UNESP]
Miyaki, Cristina Y.
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade de São Paulo (USP)
Universidade Federal de Goiás (UFG)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Presti, Flavia T.
Oliveira-Marques, Adriana R.
Caparroz, Renato
Biondo, Cibele [UNESP]
Miyaki, Cristina Y.
dc.subject.por.fl_str_mv conservation
cross-amplification
macaw
microsatellite
Psittaciformes
topic conservation
cross-amplification
macaw
microsatellite
Psittaciformes
description Cross-amplification was tested and variability in microsatellite primers (designed for Neotropical parrots) compared, in five macaw species, viz., three endangered blue macaws (Cyanopsitta spixii [extinct in the wild], Anodorhynchus leari [endangered] and Anodorhynchus hyacinthinus [vulnerable]), and two unthreatened red macaws (Ara chloropterus and Ara macao). Among the primers tested, 84.6% successfully amplified products in C. spixii, 83.3% in A. leari, 76.4% in A. hyacinthinus, 78.6% in A. chloropterus and 71.4% in A. macao. The mean expected heterozygosity estimated for each species, and based on loci analyzed in all the five, ranged from 0.33 (A. hyacinthinus) to 0.85 (A. macao). As expected, the results revealed lower levels of genetic variability in threatened macaw species than in unthreatened. The low combined probability of genetic identity and the moderate to high potential for paternity exclusion, indicate the utility of the microsatellite loci set selected for each macaw species in kinship and population studies, thus constituting an aid in planning in-situ and ex-situ conservation.
publishDate 2011
dc.date.none.fl_str_mv 2011-01-01
2013-09-30T20:08:47Z
2013-09-30T20:08:47Z
2014-05-20T13:57:26Z
2014-05-20T13:57:26Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/S1415-47572011005000012
Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 34, n. 2, p. 348-352, 2011.
1415-4757
http://hdl.handle.net/11449/20483
10.1590/S1415-47572011005000012
S1415-47572011000200030
WOS:000290865300030
S1415-47572011000200030.pdf
url http://dx.doi.org/10.1590/S1415-47572011005000012
http://hdl.handle.net/11449/20483
identifier_str_mv Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 34, n. 2, p. 348-352, 2011.
1415-4757
10.1590/S1415-47572011005000012
S1415-47572011000200030
WOS:000290865300030
S1415-47572011000200030.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Genetics and Molecular Biology
1.493
0,638
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 348-352
application/pdf
dc.publisher.none.fl_str_mv Sociedade Brasileira de Genética
publisher.none.fl_str_mv Sociedade Brasileira de Genética
dc.source.none.fl_str_mv SciELO
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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