Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp

Detalhes bibliográficos
Autor(a) principal: Viadanna, Pedro H. O. [UNESP]
Data de Publicação: 2017
Outros Autores: Miller-Morgan, Tim, Peterson, Trace, Way, Keith, Stone, David M., Marty, Gary D., Pilarski, Fabiana [UNESP], Hedrick, Ronald P., Waltzek, Thomas B.
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3354/dao03066
http://hdl.handle.net/11449/228337
Resumo: Cyprinid herpesvirus 1 (CyHV1) infects all scaled and color varieties of common carp Cyprinus carpio, including koi. While it is most often associated with unsightly growths known as 'carp pox,' the underlying lesion (epidermal hyperplasia) can arise from a variety of disease processes. CyHV1-induced epidermal hyperplasia may occur transiently in response to water temperature, and thus histopathology cannot be used in isolation to assess CyHV1 infection status. To address this problem, here we describe a PCR assay targeted to the putative thymidine kinase gene of CyHV1. The PCR assay generates a 141 bp amplicon and reliably detects down to 10 copies of control plasmid DNA sequence (analytic sensitivity). The PCR does not cross-detect genomic DNA from cyprinid herpesvirus 2 and 3 (analytic specificity). The CyHV1 PCR effectively detected viral DNA in koi and common carp sampled from various locations in the UK, USA, Brazil, and Japan. Viral DNA was detected in both normal appearing and grossly affected epidermal tissues from koi experiencing natural epizootics. The new CyHV1 PCR provides an additional approach to histopathology for the rapid detection of CyHV1. Analysis of the thymidine kinase gene sequences determined for 7 PCR-positive carp originating from disparate geographical regions identified 3 sequence types, with 1 type occurring in both koi and common carp.
id UNSP_b8d4d265a2f9ac7659773ff467e654da
oai_identifier_str oai:repositorio.unesp.br:11449/228337
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carpCyprinus carpioSensitivitySpecificityCyprinid herpesvirus 1 (CyHV1) infects all scaled and color varieties of common carp Cyprinus carpio, including koi. While it is most often associated with unsightly growths known as 'carp pox,' the underlying lesion (epidermal hyperplasia) can arise from a variety of disease processes. CyHV1-induced epidermal hyperplasia may occur transiently in response to water temperature, and thus histopathology cannot be used in isolation to assess CyHV1 infection status. To address this problem, here we describe a PCR assay targeted to the putative thymidine kinase gene of CyHV1. The PCR assay generates a 141 bp amplicon and reliably detects down to 10 copies of control plasmid DNA sequence (analytic sensitivity). The PCR does not cross-detect genomic DNA from cyprinid herpesvirus 2 and 3 (analytic specificity). The CyHV1 PCR effectively detected viral DNA in koi and common carp sampled from various locations in the UK, USA, Brazil, and Japan. Viral DNA was detected in both normal appearing and grossly affected epidermal tissues from koi experiencing natural epizootics. The new CyHV1 PCR provides an additional approach to histopathology for the rapid detection of CyHV1. Analysis of the thymidine kinase gene sequences determined for 7 PCR-positive carp originating from disparate geographical regions identified 3 sequence types, with 1 type occurring in both koi and common carp.Department of Infectious Diseases and Pathology College of Veterinary Medicine University of FloridaDepartment of Biomedical Sciences College of Veterinary Medicine Oregon State UniversityCentre for Environment Fisheries and Aquaculture Science, Barrack RoadAnimal Health Centre Ministry of Agriculture, 1767 Angus Campbell Rd.Aquaculture Center CAUNESP Pathology of Aquatic Organism Laboratory, Rod. Paulo Donato Castellane s/nDepartment of Medicine and Epidemiology School of Veterinary Medicine University of CaliforniaAquaculture Center CAUNESP Pathology of Aquatic Organism Laboratory, Rod. Paulo Donato Castellane s/nUniversity of FloridaOregon State UniversityFisheries and Aquaculture ScienceMinistry of AgricultureUniversidade Estadual Paulista (UNESP)University of CaliforniaViadanna, Pedro H. O. [UNESP]Miller-Morgan, TimPeterson, TraceWay, KeithStone, David M.Marty, Gary D.Pilarski, Fabiana [UNESP]Hedrick, Ronald P.Waltzek, Thomas B.2022-04-29T08:05:42Z2022-04-29T08:05:42Z2017-02-08info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article19-27http://dx.doi.org/10.3354/dao03066Diseases of Aquatic Organisms, v. 123, n. 1, p. 19-27, 2017.1616-15800177-5103http://hdl.handle.net/11449/22833710.3354/dao030662-s2.0-85020380724Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengDiseases of Aquatic Organismsinfo:eu-repo/semantics/openAccess2024-04-09T15:29:58Zoai:repositorio.unesp.br:11449/228337Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-04-09T15:29:58Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
title Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
spellingShingle Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
Viadanna, Pedro H. O. [UNESP]
Cyprinus carpio
Sensitivity
Specificity
title_short Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
title_full Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
title_fullStr Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
title_full_unstemmed Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
title_sort Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
author Viadanna, Pedro H. O. [UNESP]
author_facet Viadanna, Pedro H. O. [UNESP]
Miller-Morgan, Tim
Peterson, Trace
Way, Keith
Stone, David M.
Marty, Gary D.
Pilarski, Fabiana [UNESP]
Hedrick, Ronald P.
Waltzek, Thomas B.
author_role author
author2 Miller-Morgan, Tim
Peterson, Trace
Way, Keith
Stone, David M.
Marty, Gary D.
Pilarski, Fabiana [UNESP]
Hedrick, Ronald P.
Waltzek, Thomas B.
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv University of Florida
Oregon State University
Fisheries and Aquaculture Science
Ministry of Agriculture
Universidade Estadual Paulista (UNESP)
University of California
dc.contributor.author.fl_str_mv Viadanna, Pedro H. O. [UNESP]
Miller-Morgan, Tim
Peterson, Trace
Way, Keith
Stone, David M.
Marty, Gary D.
Pilarski, Fabiana [UNESP]
Hedrick, Ronald P.
Waltzek, Thomas B.
dc.subject.por.fl_str_mv Cyprinus carpio
Sensitivity
Specificity
topic Cyprinus carpio
Sensitivity
Specificity
description Cyprinid herpesvirus 1 (CyHV1) infects all scaled and color varieties of common carp Cyprinus carpio, including koi. While it is most often associated with unsightly growths known as 'carp pox,' the underlying lesion (epidermal hyperplasia) can arise from a variety of disease processes. CyHV1-induced epidermal hyperplasia may occur transiently in response to water temperature, and thus histopathology cannot be used in isolation to assess CyHV1 infection status. To address this problem, here we describe a PCR assay targeted to the putative thymidine kinase gene of CyHV1. The PCR assay generates a 141 bp amplicon and reliably detects down to 10 copies of control plasmid DNA sequence (analytic sensitivity). The PCR does not cross-detect genomic DNA from cyprinid herpesvirus 2 and 3 (analytic specificity). The CyHV1 PCR effectively detected viral DNA in koi and common carp sampled from various locations in the UK, USA, Brazil, and Japan. Viral DNA was detected in both normal appearing and grossly affected epidermal tissues from koi experiencing natural epizootics. The new CyHV1 PCR provides an additional approach to histopathology for the rapid detection of CyHV1. Analysis of the thymidine kinase gene sequences determined for 7 PCR-positive carp originating from disparate geographical regions identified 3 sequence types, with 1 type occurring in both koi and common carp.
publishDate 2017
dc.date.none.fl_str_mv 2017-02-08
2022-04-29T08:05:42Z
2022-04-29T08:05:42Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3354/dao03066
Diseases of Aquatic Organisms, v. 123, n. 1, p. 19-27, 2017.
1616-1580
0177-5103
http://hdl.handle.net/11449/228337
10.3354/dao03066
2-s2.0-85020380724
url http://dx.doi.org/10.3354/dao03066
http://hdl.handle.net/11449/228337
identifier_str_mv Diseases of Aquatic Organisms, v. 123, n. 1, p. 19-27, 2017.
1616-1580
0177-5103
10.3354/dao03066
2-s2.0-85020380724
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Diseases of Aquatic Organisms
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 19-27
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1799965038290665472