Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.3354/dao03066 http://hdl.handle.net/11449/228337 |
Resumo: | Cyprinid herpesvirus 1 (CyHV1) infects all scaled and color varieties of common carp Cyprinus carpio, including koi. While it is most often associated with unsightly growths known as 'carp pox,' the underlying lesion (epidermal hyperplasia) can arise from a variety of disease processes. CyHV1-induced epidermal hyperplasia may occur transiently in response to water temperature, and thus histopathology cannot be used in isolation to assess CyHV1 infection status. To address this problem, here we describe a PCR assay targeted to the putative thymidine kinase gene of CyHV1. The PCR assay generates a 141 bp amplicon and reliably detects down to 10 copies of control plasmid DNA sequence (analytic sensitivity). The PCR does not cross-detect genomic DNA from cyprinid herpesvirus 2 and 3 (analytic specificity). The CyHV1 PCR effectively detected viral DNA in koi and common carp sampled from various locations in the UK, USA, Brazil, and Japan. Viral DNA was detected in both normal appearing and grossly affected epidermal tissues from koi experiencing natural epizootics. The new CyHV1 PCR provides an additional approach to histopathology for the rapid detection of CyHV1. Analysis of the thymidine kinase gene sequences determined for 7 PCR-positive carp originating from disparate geographical regions identified 3 sequence types, with 1 type occurring in both koi and common carp. |
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Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carpCyprinus carpioSensitivitySpecificityCyprinid herpesvirus 1 (CyHV1) infects all scaled and color varieties of common carp Cyprinus carpio, including koi. While it is most often associated with unsightly growths known as 'carp pox,' the underlying lesion (epidermal hyperplasia) can arise from a variety of disease processes. CyHV1-induced epidermal hyperplasia may occur transiently in response to water temperature, and thus histopathology cannot be used in isolation to assess CyHV1 infection status. To address this problem, here we describe a PCR assay targeted to the putative thymidine kinase gene of CyHV1. The PCR assay generates a 141 bp amplicon and reliably detects down to 10 copies of control plasmid DNA sequence (analytic sensitivity). The PCR does not cross-detect genomic DNA from cyprinid herpesvirus 2 and 3 (analytic specificity). The CyHV1 PCR effectively detected viral DNA in koi and common carp sampled from various locations in the UK, USA, Brazil, and Japan. Viral DNA was detected in both normal appearing and grossly affected epidermal tissues from koi experiencing natural epizootics. The new CyHV1 PCR provides an additional approach to histopathology for the rapid detection of CyHV1. Analysis of the thymidine kinase gene sequences determined for 7 PCR-positive carp originating from disparate geographical regions identified 3 sequence types, with 1 type occurring in both koi and common carp.Department of Infectious Diseases and Pathology College of Veterinary Medicine University of FloridaDepartment of Biomedical Sciences College of Veterinary Medicine Oregon State UniversityCentre for Environment Fisheries and Aquaculture Science, Barrack RoadAnimal Health Centre Ministry of Agriculture, 1767 Angus Campbell Rd.Aquaculture Center CAUNESP Pathology of Aquatic Organism Laboratory, Rod. Paulo Donato Castellane s/nDepartment of Medicine and Epidemiology School of Veterinary Medicine University of CaliforniaAquaculture Center CAUNESP Pathology of Aquatic Organism Laboratory, Rod. Paulo Donato Castellane s/nUniversity of FloridaOregon State UniversityFisheries and Aquaculture ScienceMinistry of AgricultureUniversidade Estadual Paulista (UNESP)University of CaliforniaViadanna, Pedro H. O. [UNESP]Miller-Morgan, TimPeterson, TraceWay, KeithStone, David M.Marty, Gary D.Pilarski, Fabiana [UNESP]Hedrick, Ronald P.Waltzek, Thomas B.2022-04-29T08:05:42Z2022-04-29T08:05:42Z2017-02-08info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article19-27http://dx.doi.org/10.3354/dao03066Diseases of Aquatic Organisms, v. 123, n. 1, p. 19-27, 2017.1616-15800177-5103http://hdl.handle.net/11449/22833710.3354/dao030662-s2.0-85020380724Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengDiseases of Aquatic Organismsinfo:eu-repo/semantics/openAccess2024-04-09T15:29:58Zoai:repositorio.unesp.br:11449/228337Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T18:29:01.002732Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp |
title |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp |
spellingShingle |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp Viadanna, Pedro H. O. [UNESP] Cyprinus carpio Sensitivity Specificity |
title_short |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp |
title_full |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp |
title_fullStr |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp |
title_full_unstemmed |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp |
title_sort |
Development of a PCR assay to detect cyprinid herpesvirus 1 in koi and common carp |
author |
Viadanna, Pedro H. O. [UNESP] |
author_facet |
Viadanna, Pedro H. O. [UNESP] Miller-Morgan, Tim Peterson, Trace Way, Keith Stone, David M. Marty, Gary D. Pilarski, Fabiana [UNESP] Hedrick, Ronald P. Waltzek, Thomas B. |
author_role |
author |
author2 |
Miller-Morgan, Tim Peterson, Trace Way, Keith Stone, David M. Marty, Gary D. Pilarski, Fabiana [UNESP] Hedrick, Ronald P. Waltzek, Thomas B. |
author2_role |
author author author author author author author author |
dc.contributor.none.fl_str_mv |
University of Florida Oregon State University Fisheries and Aquaculture Science Ministry of Agriculture Universidade Estadual Paulista (UNESP) University of California |
dc.contributor.author.fl_str_mv |
Viadanna, Pedro H. O. [UNESP] Miller-Morgan, Tim Peterson, Trace Way, Keith Stone, David M. Marty, Gary D. Pilarski, Fabiana [UNESP] Hedrick, Ronald P. Waltzek, Thomas B. |
dc.subject.por.fl_str_mv |
Cyprinus carpio Sensitivity Specificity |
topic |
Cyprinus carpio Sensitivity Specificity |
description |
Cyprinid herpesvirus 1 (CyHV1) infects all scaled and color varieties of common carp Cyprinus carpio, including koi. While it is most often associated with unsightly growths known as 'carp pox,' the underlying lesion (epidermal hyperplasia) can arise from a variety of disease processes. CyHV1-induced epidermal hyperplasia may occur transiently in response to water temperature, and thus histopathology cannot be used in isolation to assess CyHV1 infection status. To address this problem, here we describe a PCR assay targeted to the putative thymidine kinase gene of CyHV1. The PCR assay generates a 141 bp amplicon and reliably detects down to 10 copies of control plasmid DNA sequence (analytic sensitivity). The PCR does not cross-detect genomic DNA from cyprinid herpesvirus 2 and 3 (analytic specificity). The CyHV1 PCR effectively detected viral DNA in koi and common carp sampled from various locations in the UK, USA, Brazil, and Japan. Viral DNA was detected in both normal appearing and grossly affected epidermal tissues from koi experiencing natural epizootics. The new CyHV1 PCR provides an additional approach to histopathology for the rapid detection of CyHV1. Analysis of the thymidine kinase gene sequences determined for 7 PCR-positive carp originating from disparate geographical regions identified 3 sequence types, with 1 type occurring in both koi and common carp. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-02-08 2022-04-29T08:05:42Z 2022-04-29T08:05:42Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.3354/dao03066 Diseases of Aquatic Organisms, v. 123, n. 1, p. 19-27, 2017. 1616-1580 0177-5103 http://hdl.handle.net/11449/228337 10.3354/dao03066 2-s2.0-85020380724 |
url |
http://dx.doi.org/10.3354/dao03066 http://hdl.handle.net/11449/228337 |
identifier_str_mv |
Diseases of Aquatic Organisms, v. 123, n. 1, p. 19-27, 2017. 1616-1580 0177-5103 10.3354/dao03066 2-s2.0-85020380724 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Diseases of Aquatic Organisms |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
19-27 |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128938040360960 |