Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion

Detalhes bibliográficos
Autor(a) principal: Tonelotto, Mariana
Data de Publicação: 2014
Outros Autores: Pirota, Rosangela Donizete Perpetua Buzon, Delabona, Priscila Da Silva, Barros, Georgia De Oliveira Figueiredo, Golubev, Alexander M., Polikarpov, Igor, Farinas, Cristiane Sanchez
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.3109/10242422.2013.801018
http://hdl.handle.net/11449/220044
Resumo: The selection of enzyme-producing fungi is useful to obtain enzymes required to hydrolyze lignocellulosic material and thereby contribute to biomass conversion into fuels and chemicals. Besides cellulases, the presence of accessory enzymes in enzyme cocktails is necessary to enhance hydrolysis efficiency. This study evaluates the production, purification, and biochemical-kinetic characterization of β-galactosidase produced by a new strain of Aspergillus niger (P47C3) isolated from the Amazon Forest. The A. niger (P47C3) was cultured under SmF conditions and β-galactosidase was purified in a three-step purification, using an ultrafiltration membrane, ion exchange (TSK-SP), and gel filtration (Sephacryl S-200). The calculated molecular weight of the purified enzyme was 125 kDa. Optimum pH (4.0) and temperature (55°C) of β-galactosidase activity were determined. The values of the kinetic parameters obtained from p-nitrophenyl-β-D- galactopyranoside (PNPG) hydrolysis were 2.2 mM and 0.285 mM/min for Km and Vmax, respectively. The inhibition of PNPG hydrolysis by β-galactosidase in the presence of the inhibitor galactose gave a Ki value of 5.01 mM. As a precursor to elucidating the tertiary structure using X-ray diffraction, the β-galactosidase was crystallized using 0.2 M Tris-HCl buffer, with 12% PEG 4000 as the precipitation agent; the largest crystals were formed at pH 8.6. These results provide the basis for further structural and functional studies of this accessory enzyme to evaluate its potential biotechnological applications. © 2014 Informa UK, Ltd.
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spelling Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversionAccessory enzymesAmazonAspergillus nigerBiomassβ-galactosidaseThe selection of enzyme-producing fungi is useful to obtain enzymes required to hydrolyze lignocellulosic material and thereby contribute to biomass conversion into fuels and chemicals. Besides cellulases, the presence of accessory enzymes in enzyme cocktails is necessary to enhance hydrolysis efficiency. This study evaluates the production, purification, and biochemical-kinetic characterization of β-galactosidase produced by a new strain of Aspergillus niger (P47C3) isolated from the Amazon Forest. The A. niger (P47C3) was cultured under SmF conditions and β-galactosidase was purified in a three-step purification, using an ultrafiltration membrane, ion exchange (TSK-SP), and gel filtration (Sephacryl S-200). The calculated molecular weight of the purified enzyme was 125 kDa. Optimum pH (4.0) and temperature (55°C) of β-galactosidase activity were determined. The values of the kinetic parameters obtained from p-nitrophenyl-β-D- galactopyranoside (PNPG) hydrolysis were 2.2 mM and 0.285 mM/min for Km and Vmax, respectively. The inhibition of PNPG hydrolysis by β-galactosidase in the presence of the inhibitor galactose gave a Ki value of 5.01 mM. As a precursor to elucidating the tertiary structure using X-ray diffraction, the β-galactosidase was crystallized using 0.2 M Tris-HCl buffer, with 12% PEG 4000 as the precipitation agent; the largest crystals were formed at pH 8.6. These results provide the basis for further structural and functional studies of this accessory enzyme to evaluate its potential biotechnological applications. © 2014 Informa UK, Ltd.Programa de Pós-graduação em Biotecnologia Universidade Federal de São Carlos (UFSCar), Rod. Washington Luis, Km 235, 13565-905, São Carlos/SPEmbrapa Instrumentação, Rua XV de Novembro, 1452, 13560-970, São Carlos/SPPetersburg Nuclear Physics Institute PNPI RAS Gatchina, Leningrad District 188300Universidade do Estado de São Paulo (USP), Av. Trabalhador São-Carlense 400 Arnold Schimidt, 13566-590, São Carlos/SPUniversidade Federal de São Carlos (UFSCar)Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)PNPI RAS GatchinaUniversidade de São Paulo (USP)Tonelotto, MarianaPirota, Rosangela Donizete Perpetua BuzonDelabona, Priscila Da SilvaBarros, Georgia De Oliveira FigueiredoGolubev, Alexander M.Polikarpov, IgorFarinas, Cristiane Sanchez2022-04-28T18:59:18Z2022-04-28T18:59:18Z2014-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article13-22http://dx.doi.org/10.3109/10242422.2013.801018Biocatalysis and Biotransformation, v. 32, n. 1, p. 13-22, 2014.1029-24461024-2422http://hdl.handle.net/11449/22004410.3109/10242422.2013.8010182-s2.0-84893154287Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBiocatalysis and Biotransformationinfo:eu-repo/semantics/openAccess2022-04-28T18:59:18Zoai:repositorio.unesp.br:11449/220044Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462022-04-28T18:59:18Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
title Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
spellingShingle Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
Tonelotto, Mariana
Accessory enzymes
Amazon
Aspergillus niger
Biomass
β-galactosidase
title_short Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
title_full Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
title_fullStr Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
title_full_unstemmed Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
title_sort Isolation and characterization of a β-galactosidase from a new Amazon forest strain of Aspergillus niger as a potential accessory enzyme for biomass conversion
author Tonelotto, Mariana
author_facet Tonelotto, Mariana
Pirota, Rosangela Donizete Perpetua Buzon
Delabona, Priscila Da Silva
Barros, Georgia De Oliveira Figueiredo
Golubev, Alexander M.
Polikarpov, Igor
Farinas, Cristiane Sanchez
author_role author
author2 Pirota, Rosangela Donizete Perpetua Buzon
Delabona, Priscila Da Silva
Barros, Georgia De Oliveira Figueiredo
Golubev, Alexander M.
Polikarpov, Igor
Farinas, Cristiane Sanchez
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Carlos (UFSCar)
Empresa Brasileira de Pesquisa Agropecuária (EMBRAPA)
PNPI RAS Gatchina
Universidade de São Paulo (USP)
dc.contributor.author.fl_str_mv Tonelotto, Mariana
Pirota, Rosangela Donizete Perpetua Buzon
Delabona, Priscila Da Silva
Barros, Georgia De Oliveira Figueiredo
Golubev, Alexander M.
Polikarpov, Igor
Farinas, Cristiane Sanchez
dc.subject.por.fl_str_mv Accessory enzymes
Amazon
Aspergillus niger
Biomass
β-galactosidase
topic Accessory enzymes
Amazon
Aspergillus niger
Biomass
β-galactosidase
description The selection of enzyme-producing fungi is useful to obtain enzymes required to hydrolyze lignocellulosic material and thereby contribute to biomass conversion into fuels and chemicals. Besides cellulases, the presence of accessory enzymes in enzyme cocktails is necessary to enhance hydrolysis efficiency. This study evaluates the production, purification, and biochemical-kinetic characterization of β-galactosidase produced by a new strain of Aspergillus niger (P47C3) isolated from the Amazon Forest. The A. niger (P47C3) was cultured under SmF conditions and β-galactosidase was purified in a three-step purification, using an ultrafiltration membrane, ion exchange (TSK-SP), and gel filtration (Sephacryl S-200). The calculated molecular weight of the purified enzyme was 125 kDa. Optimum pH (4.0) and temperature (55°C) of β-galactosidase activity were determined. The values of the kinetic parameters obtained from p-nitrophenyl-β-D- galactopyranoside (PNPG) hydrolysis were 2.2 mM and 0.285 mM/min for Km and Vmax, respectively. The inhibition of PNPG hydrolysis by β-galactosidase in the presence of the inhibitor galactose gave a Ki value of 5.01 mM. As a precursor to elucidating the tertiary structure using X-ray diffraction, the β-galactosidase was crystallized using 0.2 M Tris-HCl buffer, with 12% PEG 4000 as the precipitation agent; the largest crystals were formed at pH 8.6. These results provide the basis for further structural and functional studies of this accessory enzyme to evaluate its potential biotechnological applications. © 2014 Informa UK, Ltd.
publishDate 2014
dc.date.none.fl_str_mv 2014-01-01
2022-04-28T18:59:18Z
2022-04-28T18:59:18Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.3109/10242422.2013.801018
Biocatalysis and Biotransformation, v. 32, n. 1, p. 13-22, 2014.
1029-2446
1024-2422
http://hdl.handle.net/11449/220044
10.3109/10242422.2013.801018
2-s2.0-84893154287
url http://dx.doi.org/10.3109/10242422.2013.801018
http://hdl.handle.net/11449/220044
identifier_str_mv Biocatalysis and Biotransformation, v. 32, n. 1, p. 13-22, 2014.
1029-2446
1024-2422
10.3109/10242422.2013.801018
2-s2.0-84893154287
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Biocatalysis and Biotransformation
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 13-22
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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