Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes

Detalhes bibliográficos
Autor(a) principal: Ierich, Jéssica Cristiane Magalhães
Data de Publicação: 2019
Outros Autores: Brum, Doralina Guimarães [UNESP], Moraes, Ariana de Souza, Higa, Akemi Martins, Garcia, Pâmela Soto, Miyazaki, Celina Massumi, Ferreira, Marystela, Peroni, Luís Antonio, Oliveira, Guedmiller Souza de, Franca, Eduardo de Faria, Freitas, Luiz Carlos Gomide, Leite, Fabio Lima
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1038/s41598-018-36578-8
http://hdl.handle.net/11449/188729
Resumo: Antigen-antibody interaction is crucial in autoimmune disease pathogenesis, as multiple sclerosis and neuromyelitis optica. Given that, autoantibodies are essential biomolecules, of which the myelin oligodendrocyte glycoprotein (MOG) can figure as a target. Here we combined Molecular Dynamics (MD), Steered Molecular Dynamics (SMD), and Atomic Force Microscope (AFM) to detail MOG recognition by its specific antibody. The complex model consisted of the MOG external domain interacting with an experimental anti-MOG antibody from the Protein Data Bank (1PKQ). Computational data demonstrated thirteen MOG residues with a robust contribution to the antigen-antibody interaction. Comprising five of the thirteen anchor residues (ASP 102 , HIS 103 , SER 104 , TYR 105 , and GLN 106 ), the well-known MOG 92–106 peptide in complex with the anti-MOG was analysed by AFM and SMD. These analyses evidenced similar force values of 780 pN and 765 pN for computational and experimental MOG 92–106 and anti-MOG detachment, respectively. MOG 92–106 was responsible for 75% of the total force measured between MOG external domain and anti-MOG, holding the interaction with the antibody. The antigen-antibody binding was confirmed by Surface Plasmon Resonance (SPR) measurements. Combined approaches presented here can conveniently be adjusted to detail novel molecules in diseases research. This can optimize pre-clinical steps, guiding experiments, reducing costs, and animal model usage.
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spelling Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopesAntigen-antibody interaction is crucial in autoimmune disease pathogenesis, as multiple sclerosis and neuromyelitis optica. Given that, autoantibodies are essential biomolecules, of which the myelin oligodendrocyte glycoprotein (MOG) can figure as a target. Here we combined Molecular Dynamics (MD), Steered Molecular Dynamics (SMD), and Atomic Force Microscope (AFM) to detail MOG recognition by its specific antibody. The complex model consisted of the MOG external domain interacting with an experimental anti-MOG antibody from the Protein Data Bank (1PKQ). Computational data demonstrated thirteen MOG residues with a robust contribution to the antigen-antibody interaction. Comprising five of the thirteen anchor residues (ASP 102 , HIS 103 , SER 104 , TYR 105 , and GLN 106 ), the well-known MOG 92–106 peptide in complex with the anti-MOG was analysed by AFM and SMD. These analyses evidenced similar force values of 780 pN and 765 pN for computational and experimental MOG 92–106 and anti-MOG detachment, respectively. MOG 92–106 was responsible for 75% of the total force measured between MOG external domain and anti-MOG, holding the interaction with the antibody. The antigen-antibody binding was confirmed by Surface Plasmon Resonance (SPR) measurements. Combined approaches presented here can conveniently be adjusted to detail novel molecules in diseases research. This can optimize pre-clinical steps, guiding experiments, reducing costs, and animal model usage.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Nanoneurobiophysics Research Group Department of Physics Chemistry and Mathematics Federal University of São CarlosInstitute of Tropical Medicine of São Paulo University of São PauloDepartment of Neurology Psychology and Psychiatry UNESP - São Paulo State UniversityScience and Technology Centre for Sustainability Federal University of São CarlosRheabiotech Laboratory Research and DevelopmentInstitute of Chemistry Federal University of UberlândiaDepartment of Chemistry Federal University of São CarlosDepartment of Neurology Psychology and Psychiatry UNESP - São Paulo State UniversityFAPESP: 2012/50839-4FAPESP: 2013/09746-5FAPESP: 2014/12082-4FAPESP: 2014/15093-7FAPESP: 2014/21530-0FAPESP: 2014/26369-3FAPESP: 2015/05283-6FAPESP: 2015/06847-0FAPESP: 2016/19387-0CNPq: 305069/2016-0CNPq: 459768/2014-0Universidade Federal de São Carlos (UFSCar)Universidade de São Paulo (USP)Universidade Estadual Paulista (Unesp)Rheabiotech Laboratory Research and DevelopmentUniversidade Federal de Uberlândia (UFU)Ierich, Jéssica Cristiane MagalhãesBrum, Doralina Guimarães [UNESP]Moraes, Ariana de SouzaHiga, Akemi MartinsGarcia, Pâmela SotoMiyazaki, Celina MassumiFerreira, MarystelaPeroni, Luís AntonioOliveira, Guedmiller Souza deFranca, Eduardo de FariaFreitas, Luiz Carlos GomideLeite, Fabio Lima2019-10-06T16:17:22Z2019-10-06T16:17:22Z2019-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-018-36578-8Scientific Reports, v. 9, n. 1, 2019.2045-2322http://hdl.handle.net/11449/18872910.1038/s41598-018-36578-82-s2.0-85061565923Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2024-08-16T15:45:42Zoai:repositorio.unesp.br:11449/188729Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-16T15:45:42Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
title Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
spellingShingle Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
Ierich, Jéssica Cristiane Magalhães
title_short Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
title_full Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
title_fullStr Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
title_full_unstemmed Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
title_sort Antibody-mediated biorecognition of myelin oligodendrocyte glycoprotein: computational evidence of demyelination-related epitopes
author Ierich, Jéssica Cristiane Magalhães
author_facet Ierich, Jéssica Cristiane Magalhães
Brum, Doralina Guimarães [UNESP]
Moraes, Ariana de Souza
Higa, Akemi Martins
Garcia, Pâmela Soto
Miyazaki, Celina Massumi
Ferreira, Marystela
Peroni, Luís Antonio
Oliveira, Guedmiller Souza de
Franca, Eduardo de Faria
Freitas, Luiz Carlos Gomide
Leite, Fabio Lima
author_role author
author2 Brum, Doralina Guimarães [UNESP]
Moraes, Ariana de Souza
Higa, Akemi Martins
Garcia, Pâmela Soto
Miyazaki, Celina Massumi
Ferreira, Marystela
Peroni, Luís Antonio
Oliveira, Guedmiller Souza de
Franca, Eduardo de Faria
Freitas, Luiz Carlos Gomide
Leite, Fabio Lima
author2_role author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de São Carlos (UFSCar)
Universidade de São Paulo (USP)
Universidade Estadual Paulista (Unesp)
Rheabiotech Laboratory Research and Development
Universidade Federal de Uberlândia (UFU)
dc.contributor.author.fl_str_mv Ierich, Jéssica Cristiane Magalhães
Brum, Doralina Guimarães [UNESP]
Moraes, Ariana de Souza
Higa, Akemi Martins
Garcia, Pâmela Soto
Miyazaki, Celina Massumi
Ferreira, Marystela
Peroni, Luís Antonio
Oliveira, Guedmiller Souza de
Franca, Eduardo de Faria
Freitas, Luiz Carlos Gomide
Leite, Fabio Lima
description Antigen-antibody interaction is crucial in autoimmune disease pathogenesis, as multiple sclerosis and neuromyelitis optica. Given that, autoantibodies are essential biomolecules, of which the myelin oligodendrocyte glycoprotein (MOG) can figure as a target. Here we combined Molecular Dynamics (MD), Steered Molecular Dynamics (SMD), and Atomic Force Microscope (AFM) to detail MOG recognition by its specific antibody. The complex model consisted of the MOG external domain interacting with an experimental anti-MOG antibody from the Protein Data Bank (1PKQ). Computational data demonstrated thirteen MOG residues with a robust contribution to the antigen-antibody interaction. Comprising five of the thirteen anchor residues (ASP 102 , HIS 103 , SER 104 , TYR 105 , and GLN 106 ), the well-known MOG 92–106 peptide in complex with the anti-MOG was analysed by AFM and SMD. These analyses evidenced similar force values of 780 pN and 765 pN for computational and experimental MOG 92–106 and anti-MOG detachment, respectively. MOG 92–106 was responsible for 75% of the total force measured between MOG external domain and anti-MOG, holding the interaction with the antibody. The antigen-antibody binding was confirmed by Surface Plasmon Resonance (SPR) measurements. Combined approaches presented here can conveniently be adjusted to detail novel molecules in diseases research. This can optimize pre-clinical steps, guiding experiments, reducing costs, and animal model usage.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T16:17:22Z
2019-10-06T16:17:22Z
2019-12-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1038/s41598-018-36578-8
Scientific Reports, v. 9, n. 1, 2019.
2045-2322
http://hdl.handle.net/11449/188729
10.1038/s41598-018-36578-8
2-s2.0-85061565923
url http://dx.doi.org/10.1038/s41598-018-36578-8
http://hdl.handle.net/11449/188729
identifier_str_mv Scientific Reports, v. 9, n. 1, 2019.
2045-2322
10.1038/s41598-018-36578-8
2-s2.0-85061565923
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Scientific Reports
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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