Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)
Autor(a) principal: | |
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Data de Publicação: | 2008 |
Outros Autores: | , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/S1415-47572008000400011 http://hdl.handle.net/11449/4834 |
Resumo: | Random regression models (RRM) were used to estimate covariance functions for 2,155 first-lactation milk yields of native Brazilian Caracu heifers. The models included contemporary group (defined as year-month of test and paddock) fixed effects, and quadratic effect of age of cow at calving. Genetic and permanent environmental effects were fitted by a random regression model and Legendre polynomials of days in milk (DIM). Schwarz's Bayesian information criteria (BIC) indicated that the best RRM assumed a six coefficient function for both random effects and a sixth order variance function for residual structure. Akaike's information criteria suggested a model with the same number of coefficients for both effects and a residual structure fitted by a step function with 15 variances. Phenotypic, additive genetic, permanent environmental and residual variances were higher at the beginning and declined during lactation. The RRM heritability estimates were 0.09 to 0.26 and generally higher at the beginning and end of lactation. Some unexpected negative genetic correlations emerged when higher order covariance functions were used. A model with four coefficients for additive genetic covariance function explains more parsimoniously the changes in genetic variation with DIM since the genetic parameter was more acceptable and BIC was close to that for a six coefficient covariance function. |
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Repositório Institucional da UNESP |
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Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae)Covariance functionsDairy cattleGenetic parameterLongitudinal dataMilk yieldRandom regression models (RRM) were used to estimate covariance functions for 2,155 first-lactation milk yields of native Brazilian Caracu heifers. The models included contemporary group (defined as year-month of test and paddock) fixed effects, and quadratic effect of age of cow at calving. Genetic and permanent environmental effects were fitted by a random regression model and Legendre polynomials of days in milk (DIM). Schwarz's Bayesian information criteria (BIC) indicated that the best RRM assumed a six coefficient function for both random effects and a sixth order variance function for residual structure. Akaike's information criteria suggested a model with the same number of coefficients for both effects and a residual structure fitted by a step function with 15 variances. Phenotypic, additive genetic, permanent environmental and residual variances were higher at the beginning and declined during lactation. The RRM heritability estimates were 0.09 to 0.26 and generally higher at the beginning and end of lactation. Some unexpected negative genetic correlations emerged when higher order covariance functions were used. A model with four coefficients for additive genetic covariance function explains more parsimoniously the changes in genetic variation with DIM since the genetic parameter was more acceptable and BIC was close to that for a six coefficient covariance function.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Secretaria da Agricultura e Abastecimento Agência Paulista de Tecnologia dos AgronegóciosUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Departamento de ZootecniaUniversidade Estadual Paulista Júlio de Mesquita Filho Faculdade de Ciências Agrárias e Veterinárias Departamento de ZootecniaSociedade Brasileira de GenéticaAgência Paulista de Tecnologia dos Agronegócios (APTA)Universidade Estadual Paulista (Unesp)El Faro, LeniraCardoso, Vera LuciaAlbuquerque, Lucia Galvão de [UNESP]2014-05-20T13:18:58Z2014-05-20T13:18:58Z2008-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article665-673application/pdfhttp://dx.doi.org/10.1590/S1415-47572008000400011Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 31, n. 3, p. 665-673, 2008.1415-4757http://hdl.handle.net/11449/483410.1590/S1415-47572008000400011S1415-47572008000400011WOS:000258695800011S1415-47572008000400011.pdf5866981114947883SciELOreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengGenetics and Molecular Biology1.4930,638info:eu-repo/semantics/openAccess2024-06-07T18:44:15Zoai:repositorio.unesp.br:11449/4834Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:15:33.935534Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) |
title |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) |
spellingShingle |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) El Faro, Lenira Covariance functions Dairy cattle Genetic parameter Longitudinal data Milk yield |
title_short |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) |
title_full |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) |
title_fullStr |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) |
title_full_unstemmed |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) |
title_sort |
Variance component estimates applying random regression models for test-day milk yield in Caracu heifers (Bos taurus Artiodactyla, Bovidae) |
author |
El Faro, Lenira |
author_facet |
El Faro, Lenira Cardoso, Vera Lucia Albuquerque, Lucia Galvão de [UNESP] |
author_role |
author |
author2 |
Cardoso, Vera Lucia Albuquerque, Lucia Galvão de [UNESP] |
author2_role |
author author |
dc.contributor.none.fl_str_mv |
Agência Paulista de Tecnologia dos Agronegócios (APTA) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
El Faro, Lenira Cardoso, Vera Lucia Albuquerque, Lucia Galvão de [UNESP] |
dc.subject.por.fl_str_mv |
Covariance functions Dairy cattle Genetic parameter Longitudinal data Milk yield |
topic |
Covariance functions Dairy cattle Genetic parameter Longitudinal data Milk yield |
description |
Random regression models (RRM) were used to estimate covariance functions for 2,155 first-lactation milk yields of native Brazilian Caracu heifers. The models included contemporary group (defined as year-month of test and paddock) fixed effects, and quadratic effect of age of cow at calving. Genetic and permanent environmental effects were fitted by a random regression model and Legendre polynomials of days in milk (DIM). Schwarz's Bayesian information criteria (BIC) indicated that the best RRM assumed a six coefficient function for both random effects and a sixth order variance function for residual structure. Akaike's information criteria suggested a model with the same number of coefficients for both effects and a residual structure fitted by a step function with 15 variances. Phenotypic, additive genetic, permanent environmental and residual variances were higher at the beginning and declined during lactation. The RRM heritability estimates were 0.09 to 0.26 and generally higher at the beginning and end of lactation. Some unexpected negative genetic correlations emerged when higher order covariance functions were used. A model with four coefficients for additive genetic covariance function explains more parsimoniously the changes in genetic variation with DIM since the genetic parameter was more acceptable and BIC was close to that for a six coefficient covariance function. |
publishDate |
2008 |
dc.date.none.fl_str_mv |
2008-01-01 2014-05-20T13:18:58Z 2014-05-20T13:18:58Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/S1415-47572008000400011 Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 31, n. 3, p. 665-673, 2008. 1415-4757 http://hdl.handle.net/11449/4834 10.1590/S1415-47572008000400011 S1415-47572008000400011 WOS:000258695800011 S1415-47572008000400011.pdf 5866981114947883 |
url |
http://dx.doi.org/10.1590/S1415-47572008000400011 http://hdl.handle.net/11449/4834 |
identifier_str_mv |
Genetics and Molecular Biology. Sociedade Brasileira de Genética, v. 31, n. 3, p. 665-673, 2008. 1415-4757 10.1590/S1415-47572008000400011 S1415-47572008000400011 WOS:000258695800011 S1415-47572008000400011.pdf 5866981114947883 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Genetics and Molecular Biology 1.493 0,638 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
665-673 application/pdf |
dc.publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
publisher.none.fl_str_mv |
Sociedade Brasileira de Genética |
dc.source.none.fl_str_mv |
SciELO reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129410201550848 |