The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)

Detalhes bibliográficos
Autor(a) principal: Silva, Duilio M. Z. de A. [UNESP]
Data de Publicação: 2016
Outros Autores: Utsunomia, Ricardo [UNESP], Ruiz-Ruano, Francisco J., Oliveira, Claudio [UNESP], Foresti, Fausto [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1080/23802359.2016.1222251
http://hdl.handle.net/11449/162832
Resumo: Complete mitochondrial genome of the characiform fish Astyanax paranae was characterized in the present study. The whole mitogenome was 16,707 bp long and consisted of 13 protein-coding genes, 22 tRNAs, 2 rRNAs genes, a control region and origin of light-strand replication. The gene order is similar to those of the congeneric blind cavefish A. mexicanus. The nucleotide content of A. paranae mitogenome was 29.5% for A, 27.6% for T, 15.8% for G, 27.1% for C. Nucleotide identity between A. paranae and A. mexicanus across all the 37 genic regions ranged from 74.9% (ND2) to 90.3% (COX3).
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spelling The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)Characidaemitochondrial DNAmtDNAnext generation sequencingComplete mitochondrial genome of the characiform fish Astyanax paranae was characterized in the present study. The whole mitogenome was 16,707 bp long and consisted of 13 protein-coding genes, 22 tRNAs, 2 rRNAs genes, a control region and origin of light-strand replication. The gene order is similar to those of the congeneric blind cavefish A. mexicanus. The nucleotide content of A. paranae mitogenome was 29.5% for A, 27.6% for T, 15.8% for G, 27.1% for C. Nucleotide identity between A. paranae and A. mexicanus across all the 37 genic regions ranged from 74.9% (ND2) to 90.3% (COX3).Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Estadual Paulista, Inst Biociencias, Dept Morfol, Botucatu, SP, BrazilUniv Granada, Dept Genet, Granada, SpainUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Botucatu, SP, BrazilFAPESP: 2013/24367-0Taylor & Francis LtdUniversidade Estadual Paulista (Unesp)Univ GranadaSilva, Duilio M. Z. de A. [UNESP]Utsunomia, Ricardo [UNESP]Ruiz-Ruano, Francisco J.Oliveira, Claudio [UNESP]Foresti, Fausto [UNESP]2018-11-26T17:33:01Z2018-11-26T17:33:01Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article586-587application/pdfhttp://dx.doi.org/10.1080/23802359.2016.1222251Mitochondrial Dna Part B-resources. Abingdon: Taylor & Francis Ltd, v. 1, p. 586-587, 2016.2380-2359http://hdl.handle.net/11449/16283210.1080/23802359.2016.1222251WOS:000402041200265WOS000402041200265.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMitochondrial Dna Part B-resources0,180info:eu-repo/semantics/openAccess2023-12-03T06:11:36Zoai:repositorio.unesp.br:11449/162832Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:21:37.750663Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
title The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
spellingShingle The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
Silva, Duilio M. Z. de A. [UNESP]
Characidae
mitochondrial DNA
mtDNA
next generation sequencing
title_short The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
title_full The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
title_fullStr The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
title_full_unstemmed The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
title_sort The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
author Silva, Duilio M. Z. de A. [UNESP]
author_facet Silva, Duilio M. Z. de A. [UNESP]
Utsunomia, Ricardo [UNESP]
Ruiz-Ruano, Francisco J.
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
author_role author
author2 Utsunomia, Ricardo [UNESP]
Ruiz-Ruano, Francisco J.
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Univ Granada
dc.contributor.author.fl_str_mv Silva, Duilio M. Z. de A. [UNESP]
Utsunomia, Ricardo [UNESP]
Ruiz-Ruano, Francisco J.
Oliveira, Claudio [UNESP]
Foresti, Fausto [UNESP]
dc.subject.por.fl_str_mv Characidae
mitochondrial DNA
mtDNA
next generation sequencing
topic Characidae
mitochondrial DNA
mtDNA
next generation sequencing
description Complete mitochondrial genome of the characiform fish Astyanax paranae was characterized in the present study. The whole mitogenome was 16,707 bp long and consisted of 13 protein-coding genes, 22 tRNAs, 2 rRNAs genes, a control region and origin of light-strand replication. The gene order is similar to those of the congeneric blind cavefish A. mexicanus. The nucleotide content of A. paranae mitogenome was 29.5% for A, 27.6% for T, 15.8% for G, 27.1% for C. Nucleotide identity between A. paranae and A. mexicanus across all the 37 genic regions ranged from 74.9% (ND2) to 90.3% (COX3).
publishDate 2016
dc.date.none.fl_str_mv 2016-01-01
2018-11-26T17:33:01Z
2018-11-26T17:33:01Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1080/23802359.2016.1222251
Mitochondrial Dna Part B-resources. Abingdon: Taylor & Francis Ltd, v. 1, p. 586-587, 2016.
2380-2359
http://hdl.handle.net/11449/162832
10.1080/23802359.2016.1222251
WOS:000402041200265
WOS000402041200265.pdf
url http://dx.doi.org/10.1080/23802359.2016.1222251
http://hdl.handle.net/11449/162832
identifier_str_mv Mitochondrial Dna Part B-resources. Abingdon: Taylor & Francis Ltd, v. 1, p. 586-587, 2016.
2380-2359
10.1080/23802359.2016.1222251
WOS:000402041200265
WOS000402041200265.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Mitochondrial Dna Part B-resources
0,180
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 586-587
application/pdf
dc.publisher.none.fl_str_mv Taylor & Francis Ltd
publisher.none.fl_str_mv Taylor & Francis Ltd
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129058055127040