The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)
Autor(a) principal: | |
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Data de Publicação: | 2016 |
Outros Autores: | , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1080/23802359.2016.1222251 http://hdl.handle.net/11449/162832 |
Resumo: | Complete mitochondrial genome of the characiform fish Astyanax paranae was characterized in the present study. The whole mitogenome was 16,707 bp long and consisted of 13 protein-coding genes, 22 tRNAs, 2 rRNAs genes, a control region and origin of light-strand replication. The gene order is similar to those of the congeneric blind cavefish A. mexicanus. The nucleotide content of A. paranae mitogenome was 29.5% for A, 27.6% for T, 15.8% for G, 27.1% for C. Nucleotide identity between A. paranae and A. mexicanus across all the 37 genic regions ranged from 74.9% (ND2) to 90.3% (COX3). |
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Repositório Institucional da UNESP |
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The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes)Characidaemitochondrial DNAmtDNAnext generation sequencingComplete mitochondrial genome of the characiform fish Astyanax paranae was characterized in the present study. The whole mitogenome was 16,707 bp long and consisted of 13 protein-coding genes, 22 tRNAs, 2 rRNAs genes, a control region and origin of light-strand replication. The gene order is similar to those of the congeneric blind cavefish A. mexicanus. The nucleotide content of A. paranae mitogenome was 29.5% for A, 27.6% for T, 15.8% for G, 27.1% for C. Nucleotide identity between A. paranae and A. mexicanus across all the 37 genic regions ranged from 74.9% (ND2) to 90.3% (COX3).Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Estadual Paulista, Inst Biociencias, Dept Morfol, Botucatu, SP, BrazilUniv Granada, Dept Genet, Granada, SpainUniv Estadual Paulista, Inst Biociencias, Dept Morfol, Botucatu, SP, BrazilFAPESP: 2013/24367-0Taylor & Francis LtdUniversidade Estadual Paulista (Unesp)Univ GranadaSilva, Duilio M. Z. de A. [UNESP]Utsunomia, Ricardo [UNESP]Ruiz-Ruano, Francisco J.Oliveira, Claudio [UNESP]Foresti, Fausto [UNESP]2018-11-26T17:33:01Z2018-11-26T17:33:01Z2016-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article586-587application/pdfhttp://dx.doi.org/10.1080/23802359.2016.1222251Mitochondrial Dna Part B-resources. Abingdon: Taylor & Francis Ltd, v. 1, p. 586-587, 2016.2380-2359http://hdl.handle.net/11449/16283210.1080/23802359.2016.1222251WOS:000402041200265WOS000402041200265.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMitochondrial Dna Part B-resources0,180info:eu-repo/semantics/openAccess2023-12-03T06:11:36Zoai:repositorio.unesp.br:11449/162832Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T19:21:37.750663Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) |
title |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) |
spellingShingle |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) Silva, Duilio M. Z. de A. [UNESP] Characidae mitochondrial DNA mtDNA next generation sequencing |
title_short |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) |
title_full |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) |
title_fullStr |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) |
title_full_unstemmed |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) |
title_sort |
The complete mitochondrial genome sequence of Astyanax paranae (Teleostei: characiformes) |
author |
Silva, Duilio M. Z. de A. [UNESP] |
author_facet |
Silva, Duilio M. Z. de A. [UNESP] Utsunomia, Ricardo [UNESP] Ruiz-Ruano, Francisco J. Oliveira, Claudio [UNESP] Foresti, Fausto [UNESP] |
author_role |
author |
author2 |
Utsunomia, Ricardo [UNESP] Ruiz-Ruano, Francisco J. Oliveira, Claudio [UNESP] Foresti, Fausto [UNESP] |
author2_role |
author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Univ Granada |
dc.contributor.author.fl_str_mv |
Silva, Duilio M. Z. de A. [UNESP] Utsunomia, Ricardo [UNESP] Ruiz-Ruano, Francisco J. Oliveira, Claudio [UNESP] Foresti, Fausto [UNESP] |
dc.subject.por.fl_str_mv |
Characidae mitochondrial DNA mtDNA next generation sequencing |
topic |
Characidae mitochondrial DNA mtDNA next generation sequencing |
description |
Complete mitochondrial genome of the characiform fish Astyanax paranae was characterized in the present study. The whole mitogenome was 16,707 bp long and consisted of 13 protein-coding genes, 22 tRNAs, 2 rRNAs genes, a control region and origin of light-strand replication. The gene order is similar to those of the congeneric blind cavefish A. mexicanus. The nucleotide content of A. paranae mitogenome was 29.5% for A, 27.6% for T, 15.8% for G, 27.1% for C. Nucleotide identity between A. paranae and A. mexicanus across all the 37 genic regions ranged from 74.9% (ND2) to 90.3% (COX3). |
publishDate |
2016 |
dc.date.none.fl_str_mv |
2016-01-01 2018-11-26T17:33:01Z 2018-11-26T17:33:01Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1080/23802359.2016.1222251 Mitochondrial Dna Part B-resources. Abingdon: Taylor & Francis Ltd, v. 1, p. 586-587, 2016. 2380-2359 http://hdl.handle.net/11449/162832 10.1080/23802359.2016.1222251 WOS:000402041200265 WOS000402041200265.pdf |
url |
http://dx.doi.org/10.1080/23802359.2016.1222251 http://hdl.handle.net/11449/162832 |
identifier_str_mv |
Mitochondrial Dna Part B-resources. Abingdon: Taylor & Francis Ltd, v. 1, p. 586-587, 2016. 2380-2359 10.1080/23802359.2016.1222251 WOS:000402041200265 WOS000402041200265.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Mitochondrial Dna Part B-resources 0,180 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
586-587 application/pdf |
dc.publisher.none.fl_str_mv |
Taylor & Francis Ltd |
publisher.none.fl_str_mv |
Taylor & Francis Ltd |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129058055127040 |