A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.mimet.2018.11.022 http://hdl.handle.net/11449/185430 |
Resumo: | Sensitive detection of Cryptosporidium oocysts is important because the protozoan can cause clinical infection in humans at extremely low numbers. In the present study, 1.5 x 10(2), 1.0 x 10(3), or 1.0 x 10(4)C. parvum oocysts were spiked into 101 of source or finished water in triplicate followed by recovery using Envirochek HV sampling capsules. One subsample of the recovered oocysts was analyzed by commercial immuno fluorescence assay (IFA), while a second subsample was subjected to DNA-RNA extraction, followed by RT-PCR using primers directed to the gene encoding Cryspovirus capsid. IFA analysis of Envirochek filter eluates of finished water detected oocysts at all 3 C. parvum oocyst doses, but only at the 1.0 x 10(3) and 1.0 x 10(4) doses in source water. Cryspovirus RT-PCR appeared to offer greater sensitivity than IFA because C. parvum oocysts were detected using this molecular technique in both source and finished water concentrates at all 3 spiking levels. A linear relationship was observed between log oocysts spiking dose and the relative intensity of the Cryspovirus RT-PCR signal for finished water, but not for source water. These data indicate that Cryspovirus RT-PCR is a sensitive method for detecting C. parvum oocysts in source and finished water. |
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A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNACryptosporidium parvumEPA Method 1623RT-PCRCryspovirusSensitive detection of Cryptosporidium oocysts is important because the protozoan can cause clinical infection in humans at extremely low numbers. In the present study, 1.5 x 10(2), 1.0 x 10(3), or 1.0 x 10(4)C. parvum oocysts were spiked into 101 of source or finished water in triplicate followed by recovery using Envirochek HV sampling capsules. One subsample of the recovered oocysts was analyzed by commercial immuno fluorescence assay (IFA), while a second subsample was subjected to DNA-RNA extraction, followed by RT-PCR using primers directed to the gene encoding Cryspovirus capsid. IFA analysis of Envirochek filter eluates of finished water detected oocysts at all 3 C. parvum oocyst doses, but only at the 1.0 x 10(3) and 1.0 x 10(4) doses in source water. Cryspovirus RT-PCR appeared to offer greater sensitivity than IFA because C. parvum oocysts were detected using this molecular technique in both source and finished water concentrates at all 3 spiking levels. A linear relationship was observed between log oocysts spiking dose and the relative intensity of the Cryspovirus RT-PCR signal for finished water, but not for source water. These data indicate that Cryspovirus RT-PCR is a sensitive method for detecting C. parvum oocysts in source and finished water.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)USDA-ARS CRIS ProjectUniv Estadual Paulista, Coll Vet Med, Dept Clin Surg & Anim Reprod, Clovis Pestana 793, BR-16050680 Sao Paulo, BrazilARS, Environm Microbial & Food Safety Lab, USDA, Beltsville, MD 20705 USAUniv Estadual Paulista, Coll Vet Med, Dept Clin Surg & Anim Reprod, Clovis Pestana 793, BR-16050680 Sao Paulo, BrazilFAPESP: 2015/07147-2USDA-ARS CRIS Project: 8042-32000-100-00-DElsevier B.V.Universidade Estadual Paulista (Unesp)ARSSouza, Milena Sato de [UNESP]O'Brien, CeliaSantin, MonicaJenkins, Mark2019-10-04T12:35:30Z2019-10-04T12:35:30Z2019-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article77-80http://dx.doi.org/10.1016/j.mimet.2018.11.022Journal Of Microbiological Methods. Amsterdam: Elsevier Science Bv, v. 156, p. 77-80, 2019.0167-7012http://hdl.handle.net/11449/18543010.1016/j.mimet.2018.11.022WOS:000458710900014Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal Of Microbiological Methodsinfo:eu-repo/semantics/openAccess2024-09-04T18:03:44Zoai:repositorio.unesp.br:11449/185430Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-09-04T18:03:44Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA |
title |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA |
spellingShingle |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA Souza, Milena Sato de [UNESP] Cryptosporidium parvum EPA Method 1623 RT-PCR Cryspovirus |
title_short |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA |
title_full |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA |
title_fullStr |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA |
title_full_unstemmed |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA |
title_sort |
A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA |
author |
Souza, Milena Sato de [UNESP] |
author_facet |
Souza, Milena Sato de [UNESP] O'Brien, Celia Santin, Monica Jenkins, Mark |
author_role |
author |
author2 |
O'Brien, Celia Santin, Monica Jenkins, Mark |
author2_role |
author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) ARS |
dc.contributor.author.fl_str_mv |
Souza, Milena Sato de [UNESP] O'Brien, Celia Santin, Monica Jenkins, Mark |
dc.subject.por.fl_str_mv |
Cryptosporidium parvum EPA Method 1623 RT-PCR Cryspovirus |
topic |
Cryptosporidium parvum EPA Method 1623 RT-PCR Cryspovirus |
description |
Sensitive detection of Cryptosporidium oocysts is important because the protozoan can cause clinical infection in humans at extremely low numbers. In the present study, 1.5 x 10(2), 1.0 x 10(3), or 1.0 x 10(4)C. parvum oocysts were spiked into 101 of source or finished water in triplicate followed by recovery using Envirochek HV sampling capsules. One subsample of the recovered oocysts was analyzed by commercial immuno fluorescence assay (IFA), while a second subsample was subjected to DNA-RNA extraction, followed by RT-PCR using primers directed to the gene encoding Cryspovirus capsid. IFA analysis of Envirochek filter eluates of finished water detected oocysts at all 3 C. parvum oocyst doses, but only at the 1.0 x 10(3) and 1.0 x 10(4) doses in source water. Cryspovirus RT-PCR appeared to offer greater sensitivity than IFA because C. parvum oocysts were detected using this molecular technique in both source and finished water concentrates at all 3 spiking levels. A linear relationship was observed between log oocysts spiking dose and the relative intensity of the Cryspovirus RT-PCR signal for finished water, but not for source water. These data indicate that Cryspovirus RT-PCR is a sensitive method for detecting C. parvum oocysts in source and finished water. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-04T12:35:30Z 2019-10-04T12:35:30Z 2019-01-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.mimet.2018.11.022 Journal Of Microbiological Methods. Amsterdam: Elsevier Science Bv, v. 156, p. 77-80, 2019. 0167-7012 http://hdl.handle.net/11449/185430 10.1016/j.mimet.2018.11.022 WOS:000458710900014 |
url |
http://dx.doi.org/10.1016/j.mimet.2018.11.022 http://hdl.handle.net/11449/185430 |
identifier_str_mv |
Journal Of Microbiological Methods. Amsterdam: Elsevier Science Bv, v. 156, p. 77-80, 2019. 0167-7012 10.1016/j.mimet.2018.11.022 WOS:000458710900014 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Journal Of Microbiological Methods |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
77-80 |
dc.publisher.none.fl_str_mv |
Elsevier B.V. |
publisher.none.fl_str_mv |
Elsevier B.V. |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
repositoriounesp@unesp.br |
_version_ |
1810021375381864448 |