A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA

Detalhes bibliográficos
Autor(a) principal: Souza, Milena Sato de [UNESP]
Data de Publicação: 2019
Outros Autores: O'Brien, Celia, Santin, Monica, Jenkins, Mark
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.mimet.2018.11.022
http://hdl.handle.net/11449/185430
Resumo: Sensitive detection of Cryptosporidium oocysts is important because the protozoan can cause clinical infection in humans at extremely low numbers. In the present study, 1.5 x 10(2), 1.0 x 10(3), or 1.0 x 10(4)C. parvum oocysts were spiked into 101 of source or finished water in triplicate followed by recovery using Envirochek HV sampling capsules. One subsample of the recovered oocysts was analyzed by commercial immuno fluorescence assay (IFA), while a second subsample was subjected to DNA-RNA extraction, followed by RT-PCR using primers directed to the gene encoding Cryspovirus capsid. IFA analysis of Envirochek filter eluates of finished water detected oocysts at all 3 C. parvum oocyst doses, but only at the 1.0 x 10(3) and 1.0 x 10(4) doses in source water. Cryspovirus RT-PCR appeared to offer greater sensitivity than IFA because C. parvum oocysts were detected using this molecular technique in both source and finished water concentrates at all 3 spiking levels. A linear relationship was observed between log oocysts spiking dose and the relative intensity of the Cryspovirus RT-PCR signal for finished water, but not for source water. These data indicate that Cryspovirus RT-PCR is a sensitive method for detecting C. parvum oocysts in source and finished water.
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spelling A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNACryptosporidium parvumEPA Method 1623RT-PCRCryspovirusSensitive detection of Cryptosporidium oocysts is important because the protozoan can cause clinical infection in humans at extremely low numbers. In the present study, 1.5 x 10(2), 1.0 x 10(3), or 1.0 x 10(4)C. parvum oocysts were spiked into 101 of source or finished water in triplicate followed by recovery using Envirochek HV sampling capsules. One subsample of the recovered oocysts was analyzed by commercial immuno fluorescence assay (IFA), while a second subsample was subjected to DNA-RNA extraction, followed by RT-PCR using primers directed to the gene encoding Cryspovirus capsid. IFA analysis of Envirochek filter eluates of finished water detected oocysts at all 3 C. parvum oocyst doses, but only at the 1.0 x 10(3) and 1.0 x 10(4) doses in source water. Cryspovirus RT-PCR appeared to offer greater sensitivity than IFA because C. parvum oocysts were detected using this molecular technique in both source and finished water concentrates at all 3 spiking levels. A linear relationship was observed between log oocysts spiking dose and the relative intensity of the Cryspovirus RT-PCR signal for finished water, but not for source water. These data indicate that Cryspovirus RT-PCR is a sensitive method for detecting C. parvum oocysts in source and finished water.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)USDA-ARS CRIS ProjectUniv Estadual Paulista, Coll Vet Med, Dept Clin Surg & Anim Reprod, Clovis Pestana 793, BR-16050680 Sao Paulo, BrazilARS, Environm Microbial & Food Safety Lab, USDA, Beltsville, MD 20705 USAUniv Estadual Paulista, Coll Vet Med, Dept Clin Surg & Anim Reprod, Clovis Pestana 793, BR-16050680 Sao Paulo, BrazilFAPESP: 2015/07147-2USDA-ARS CRIS Project: 8042-32000-100-00-DElsevier B.V.Universidade Estadual Paulista (Unesp)ARSSouza, Milena Sato de [UNESP]O'Brien, CeliaSantin, MonicaJenkins, Mark2019-10-04T12:35:30Z2019-10-04T12:35:30Z2019-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article77-80http://dx.doi.org/10.1016/j.mimet.2018.11.022Journal Of Microbiological Methods. Amsterdam: Elsevier Science Bv, v. 156, p. 77-80, 2019.0167-7012http://hdl.handle.net/11449/18543010.1016/j.mimet.2018.11.022WOS:000458710900014Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal Of Microbiological Methodsinfo:eu-repo/semantics/openAccess2024-09-04T18:03:44Zoai:repositorio.unesp.br:11449/185430Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestrepositoriounesp@unesp.bropendoar:29462024-09-04T18:03:44Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
title A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
spellingShingle A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
Souza, Milena Sato de [UNESP]
Cryptosporidium parvum
EPA Method 1623
RT-PCR
Cryspovirus
title_short A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
title_full A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
title_fullStr A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
title_full_unstemmed A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
title_sort A highly sensitive method for detecting Cryptosporidium parvum oocysts recovered from source and finished water using RT-PCR directed to Cryspovirus RNA
author Souza, Milena Sato de [UNESP]
author_facet Souza, Milena Sato de [UNESP]
O'Brien, Celia
Santin, Monica
Jenkins, Mark
author_role author
author2 O'Brien, Celia
Santin, Monica
Jenkins, Mark
author2_role author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
ARS
dc.contributor.author.fl_str_mv Souza, Milena Sato de [UNESP]
O'Brien, Celia
Santin, Monica
Jenkins, Mark
dc.subject.por.fl_str_mv Cryptosporidium parvum
EPA Method 1623
RT-PCR
Cryspovirus
topic Cryptosporidium parvum
EPA Method 1623
RT-PCR
Cryspovirus
description Sensitive detection of Cryptosporidium oocysts is important because the protozoan can cause clinical infection in humans at extremely low numbers. In the present study, 1.5 x 10(2), 1.0 x 10(3), or 1.0 x 10(4)C. parvum oocysts were spiked into 101 of source or finished water in triplicate followed by recovery using Envirochek HV sampling capsules. One subsample of the recovered oocysts was analyzed by commercial immuno fluorescence assay (IFA), while a second subsample was subjected to DNA-RNA extraction, followed by RT-PCR using primers directed to the gene encoding Cryspovirus capsid. IFA analysis of Envirochek filter eluates of finished water detected oocysts at all 3 C. parvum oocyst doses, but only at the 1.0 x 10(3) and 1.0 x 10(4) doses in source water. Cryspovirus RT-PCR appeared to offer greater sensitivity than IFA because C. parvum oocysts were detected using this molecular technique in both source and finished water concentrates at all 3 spiking levels. A linear relationship was observed between log oocysts spiking dose and the relative intensity of the Cryspovirus RT-PCR signal for finished water, but not for source water. These data indicate that Cryspovirus RT-PCR is a sensitive method for detecting C. parvum oocysts in source and finished water.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-04T12:35:30Z
2019-10-04T12:35:30Z
2019-01-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.mimet.2018.11.022
Journal Of Microbiological Methods. Amsterdam: Elsevier Science Bv, v. 156, p. 77-80, 2019.
0167-7012
http://hdl.handle.net/11449/185430
10.1016/j.mimet.2018.11.022
WOS:000458710900014
url http://dx.doi.org/10.1016/j.mimet.2018.11.022
http://hdl.handle.net/11449/185430
identifier_str_mv Journal Of Microbiological Methods. Amsterdam: Elsevier Science Bv, v. 156, p. 77-80, 2019.
0167-7012
10.1016/j.mimet.2018.11.022
WOS:000458710900014
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal Of Microbiological Methods
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 77-80
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv repositoriounesp@unesp.br
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