Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR

Detalhes bibliográficos
Autor(a) principal: Leao, Evelynne Urzedo
Data de Publicação: 2017
Outros Autores: Almeida Spadotti, David Marques de, Rocha, Kelly Cristina G., Lima, Elison Fabricio B., Tavella, Luciana, Turina, Massimo, Krause-Sakate, Renate [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1590/1678-4324-2017160425
http://hdl.handle.net/11449/164336
Resumo: Identification of Thysanoptera is based mainly on external morphology examination that can be time-consuming and difficult for non taxonomic experts. In this work, we propose a rapid and efficient molecular method to identify Frankliniella schultzei, an important and widespread pest thrips vector of tospoviruses in South America countries. Species-specific primers designed in the mitochondrial cytochrome oxidase I gene (mtCOI) were optimized for detection by conventional PCR and real-time PCR. The primers were tested on immature and adult thrips collected from crops and weeds found in Sao Paulo State. All samples collected were identified as F. schultzei, indicating the high prevalence of this species as vector of tospoviruses in Brazilian fields.
id UNSP_dc7cedb0928aaab87d14a814ec55bd42
oai_identifier_str oai:repositorio.unesp.br:11449/164336
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCRmolecular identificationreal-time PCRtospovirus vectorIdentification of Thysanoptera is based mainly on external morphology examination that can be time-consuming and difficult for non taxonomic experts. In this work, we propose a rapid and efficient molecular method to identify Frankliniella schultzei, an important and widespread pest thrips vector of tospoviruses in South America countries. Species-specific primers designed in the mitochondrial cytochrome oxidase I gene (mtCOI) were optimized for detection by conventional PCR and real-time PCR. The primers were tested on immature and adult thrips collected from crops and weeds found in Sao Paulo State. All samples collected were identified as F. schultzei, indicating the high prevalence of this species as vector of tospoviruses in Brazilian fields.Univ Estadual Sao Paulo, Fac Ciencias Agron, Dept Protecao Vegetal Botucatu, Sao Paulo, BrazilUniv Fed Piaui, UFPI, Dept Biol, Ctr Ciencias Nat, Teresina, Piaui, BrazilUniv Turin, Scuola Agr & Med Vet, Dipartimento Sci Agr Forestali & Alimentari, ULF Entomol Gen & Appl Grugliasco, Turin, ItalyIst Protez Sostenibile Piante Turin, Consiglio Nazl Ric, Curitiba, Parana, BrazilUniv Estadual Paulista, Dept Protecao Vegetal, Botucatu, SP, BrazilUniv Estadual Paulista, Dept Protecao Vegetal, Botucatu, SP, BrazilInst Tecnologia ParanaUniversidade Estadual Paulista (Unesp)Univ Fed PiauiUniv TurinIst Protez Sostenibile Piante TurinLeao, Evelynne UrzedoAlmeida Spadotti, David Marques deRocha, Kelly Cristina G.Lima, Elison Fabricio B.Tavella, LucianaTurina, MassimoKrause-Sakate, Renate [UNESP]2018-11-26T17:52:11Z2018-11-26T17:52:11Z2017-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article10application/pdfhttp://dx.doi.org/10.1590/1678-4324-2017160425Brazilian Archives Of Biology And Technology. Curitiba-parana: Inst Tecnologia Parana, v. 60, 10 p., 2017.1516-8913http://hdl.handle.net/11449/16433610.1590/1678-4324-2017160425S1516-89132017000100454WOS:000435658200001S1516-89132017000100454.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Archives Of Biology And Technology0,281info:eu-repo/semantics/openAccess2024-04-30T18:07:44Zoai:repositorio.unesp.br:11449/164336Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:20:24.747704Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
title Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
spellingShingle Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
Leao, Evelynne Urzedo
molecular identification
real-time PCR
tospovirus vector
title_short Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
title_full Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
title_fullStr Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
title_full_unstemmed Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
title_sort Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
author Leao, Evelynne Urzedo
author_facet Leao, Evelynne Urzedo
Almeida Spadotti, David Marques de
Rocha, Kelly Cristina G.
Lima, Elison Fabricio B.
Tavella, Luciana
Turina, Massimo
Krause-Sakate, Renate [UNESP]
author_role author
author2 Almeida Spadotti, David Marques de
Rocha, Kelly Cristina G.
Lima, Elison Fabricio B.
Tavella, Luciana
Turina, Massimo
Krause-Sakate, Renate [UNESP]
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
Univ Fed Piaui
Univ Turin
Ist Protez Sostenibile Piante Turin
dc.contributor.author.fl_str_mv Leao, Evelynne Urzedo
Almeida Spadotti, David Marques de
Rocha, Kelly Cristina G.
Lima, Elison Fabricio B.
Tavella, Luciana
Turina, Massimo
Krause-Sakate, Renate [UNESP]
dc.subject.por.fl_str_mv molecular identification
real-time PCR
tospovirus vector
topic molecular identification
real-time PCR
tospovirus vector
description Identification of Thysanoptera is based mainly on external morphology examination that can be time-consuming and difficult for non taxonomic experts. In this work, we propose a rapid and efficient molecular method to identify Frankliniella schultzei, an important and widespread pest thrips vector of tospoviruses in South America countries. Species-specific primers designed in the mitochondrial cytochrome oxidase I gene (mtCOI) were optimized for detection by conventional PCR and real-time PCR. The primers were tested on immature and adult thrips collected from crops and weeds found in Sao Paulo State. All samples collected were identified as F. schultzei, indicating the high prevalence of this species as vector of tospoviruses in Brazilian fields.
publishDate 2017
dc.date.none.fl_str_mv 2017-01-01
2018-11-26T17:52:11Z
2018-11-26T17:52:11Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1590/1678-4324-2017160425
Brazilian Archives Of Biology And Technology. Curitiba-parana: Inst Tecnologia Parana, v. 60, 10 p., 2017.
1516-8913
http://hdl.handle.net/11449/164336
10.1590/1678-4324-2017160425
S1516-89132017000100454
WOS:000435658200001
S1516-89132017000100454.pdf
url http://dx.doi.org/10.1590/1678-4324-2017160425
http://hdl.handle.net/11449/164336
identifier_str_mv Brazilian Archives Of Biology And Technology. Curitiba-parana: Inst Tecnologia Parana, v. 60, 10 p., 2017.
1516-8913
10.1590/1678-4324-2017160425
S1516-89132017000100454
WOS:000435658200001
S1516-89132017000100454.pdf
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Brazilian Archives Of Biology And Technology
0,281
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 10
application/pdf
dc.publisher.none.fl_str_mv Inst Tecnologia Parana
publisher.none.fl_str_mv Inst Tecnologia Parana
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808129417068675072