Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR
Autor(a) principal: | |
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Data de Publicação: | 2017 |
Outros Autores: | , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1590/1678-4324-2017160425 http://hdl.handle.net/11449/164336 |
Resumo: | Identification of Thysanoptera is based mainly on external morphology examination that can be time-consuming and difficult for non taxonomic experts. In this work, we propose a rapid and efficient molecular method to identify Frankliniella schultzei, an important and widespread pest thrips vector of tospoviruses in South America countries. Species-specific primers designed in the mitochondrial cytochrome oxidase I gene (mtCOI) were optimized for detection by conventional PCR and real-time PCR. The primers were tested on immature and adult thrips collected from crops and weeds found in Sao Paulo State. All samples collected were identified as F. schultzei, indicating the high prevalence of this species as vector of tospoviruses in Brazilian fields. |
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Repositório Institucional da UNESP |
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spelling |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCRmolecular identificationreal-time PCRtospovirus vectorIdentification of Thysanoptera is based mainly on external morphology examination that can be time-consuming and difficult for non taxonomic experts. In this work, we propose a rapid and efficient molecular method to identify Frankliniella schultzei, an important and widespread pest thrips vector of tospoviruses in South America countries. Species-specific primers designed in the mitochondrial cytochrome oxidase I gene (mtCOI) were optimized for detection by conventional PCR and real-time PCR. The primers were tested on immature and adult thrips collected from crops and weeds found in Sao Paulo State. All samples collected were identified as F. schultzei, indicating the high prevalence of this species as vector of tospoviruses in Brazilian fields.Univ Estadual Sao Paulo, Fac Ciencias Agron, Dept Protecao Vegetal Botucatu, Sao Paulo, BrazilUniv Fed Piaui, UFPI, Dept Biol, Ctr Ciencias Nat, Teresina, Piaui, BrazilUniv Turin, Scuola Agr & Med Vet, Dipartimento Sci Agr Forestali & Alimentari, ULF Entomol Gen & Appl Grugliasco, Turin, ItalyIst Protez Sostenibile Piante Turin, Consiglio Nazl Ric, Curitiba, Parana, BrazilUniv Estadual Paulista, Dept Protecao Vegetal, Botucatu, SP, BrazilUniv Estadual Paulista, Dept Protecao Vegetal, Botucatu, SP, BrazilInst Tecnologia ParanaUniversidade Estadual Paulista (Unesp)Univ Fed PiauiUniv TurinIst Protez Sostenibile Piante TurinLeao, Evelynne UrzedoAlmeida Spadotti, David Marques deRocha, Kelly Cristina G.Lima, Elison Fabricio B.Tavella, LucianaTurina, MassimoKrause-Sakate, Renate [UNESP]2018-11-26T17:52:11Z2018-11-26T17:52:11Z2017-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article10application/pdfhttp://dx.doi.org/10.1590/1678-4324-2017160425Brazilian Archives Of Biology And Technology. Curitiba-parana: Inst Tecnologia Parana, v. 60, 10 p., 2017.1516-8913http://hdl.handle.net/11449/16433610.1590/1678-4324-2017160425S1516-89132017000100454WOS:000435658200001S1516-89132017000100454.pdfWeb of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Archives Of Biology And Technology0,281info:eu-repo/semantics/openAccess2024-04-30T18:07:44Zoai:repositorio.unesp.br:11449/164336Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:20:24.747704Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR |
title |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR |
spellingShingle |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR Leao, Evelynne Urzedo molecular identification real-time PCR tospovirus vector |
title_short |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR |
title_full |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR |
title_fullStr |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR |
title_full_unstemmed |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR |
title_sort |
Efficient detection of Frankliniella schultzei (Thysanoptera, Thripidae) by cytochrome oxidase I gene (mtCOI) direct sequencing and real-time PCR |
author |
Leao, Evelynne Urzedo |
author_facet |
Leao, Evelynne Urzedo Almeida Spadotti, David Marques de Rocha, Kelly Cristina G. Lima, Elison Fabricio B. Tavella, Luciana Turina, Massimo Krause-Sakate, Renate [UNESP] |
author_role |
author |
author2 |
Almeida Spadotti, David Marques de Rocha, Kelly Cristina G. Lima, Elison Fabricio B. Tavella, Luciana Turina, Massimo Krause-Sakate, Renate [UNESP] |
author2_role |
author author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Estadual Paulista (Unesp) Univ Fed Piaui Univ Turin Ist Protez Sostenibile Piante Turin |
dc.contributor.author.fl_str_mv |
Leao, Evelynne Urzedo Almeida Spadotti, David Marques de Rocha, Kelly Cristina G. Lima, Elison Fabricio B. Tavella, Luciana Turina, Massimo Krause-Sakate, Renate [UNESP] |
dc.subject.por.fl_str_mv |
molecular identification real-time PCR tospovirus vector |
topic |
molecular identification real-time PCR tospovirus vector |
description |
Identification of Thysanoptera is based mainly on external morphology examination that can be time-consuming and difficult for non taxonomic experts. In this work, we propose a rapid and efficient molecular method to identify Frankliniella schultzei, an important and widespread pest thrips vector of tospoviruses in South America countries. Species-specific primers designed in the mitochondrial cytochrome oxidase I gene (mtCOI) were optimized for detection by conventional PCR and real-time PCR. The primers were tested on immature and adult thrips collected from crops and weeds found in Sao Paulo State. All samples collected were identified as F. schultzei, indicating the high prevalence of this species as vector of tospoviruses in Brazilian fields. |
publishDate |
2017 |
dc.date.none.fl_str_mv |
2017-01-01 2018-11-26T17:52:11Z 2018-11-26T17:52:11Z |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1590/1678-4324-2017160425 Brazilian Archives Of Biology And Technology. Curitiba-parana: Inst Tecnologia Parana, v. 60, 10 p., 2017. 1516-8913 http://hdl.handle.net/11449/164336 10.1590/1678-4324-2017160425 S1516-89132017000100454 WOS:000435658200001 S1516-89132017000100454.pdf |
url |
http://dx.doi.org/10.1590/1678-4324-2017160425 http://hdl.handle.net/11449/164336 |
identifier_str_mv |
Brazilian Archives Of Biology And Technology. Curitiba-parana: Inst Tecnologia Parana, v. 60, 10 p., 2017. 1516-8913 10.1590/1678-4324-2017160425 S1516-89132017000100454 WOS:000435658200001 S1516-89132017000100454.pdf |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Brazilian Archives Of Biology And Technology 0,281 |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
10 application/pdf |
dc.publisher.none.fl_str_mv |
Inst Tecnologia Parana |
publisher.none.fl_str_mv |
Inst Tecnologia Parana |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808129417068675072 |