Soybean rust detection and disease severity classification by remote sensing

Detalhes bibliográficos
Autor(a) principal: Negrisoli, Matheus Mereb [UNESP]
Data de Publicação: 2022
Outros Autores: Negrisoli, RaphaelMereb [UNESP], Silva, FlavioNunes da [UNESP], Lopes, Lucasda Silva [UNESP], Souza Junior, Franciscode Sales de [UNESP], Velini, Edivaldo Domingues [UNESP], Carbonari, Caio Antonio [UNESP], Rodrigues, Sergio Augusto [UNESP], Raetano, Carlos Gilberto [UNESP]
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1002/agj2.21152
http://hdl.handle.net/11449/237864
Resumo: The detection and monitoring of soybean rust (SBR) through remote sensing is promising because of the importance of the crop and the aspects of the disease. We evaluated the effects of different levels of SBR severity on soybean [Glycine max (L.) Merr.] leaflets reflectance aiming for the construction of a disease classification model. Leaflet reflectance was evaluated on two cultivars (susceptible and partially resistant) at four disease severity levels: healthy, low, moderate, and high. Leaflets were collected in the field and taken to the laboratory for spectral evaluation through the spectrophotometer UV 2700 coupled with Integrating Sphere Attachment ISR-603, in the range of 270-1000 nm. The feasibility of using a collection of vegetation indices (VIs) and data dimensionality reduction through multiple factor analysis (MFA) was evaluated, and a classification model was constructed. Ten algorithms were assessed based on precision, sensibility, and accuracy parameters, using 80% of the dataset as training data and 20% as testing dataset. The visible range and red edge region contributed more significantly to the disease prediction and classification model. The MFA performed satisfactorily in the dimensionality reduction and unveiled the effect of specific wavelengths on the classification of each class. Most of the VIs studied had high correlation performance across the severity classes. Classification accuracy and precision were >70% for all models. Linear support vector machine with the collection of VIs achieved the best results. This study provides a practical path for developing a detection model to be integrated into SBR management programs.
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spelling Soybean rust detection and disease severity classification by remote sensingThe detection and monitoring of soybean rust (SBR) through remote sensing is promising because of the importance of the crop and the aspects of the disease. We evaluated the effects of different levels of SBR severity on soybean [Glycine max (L.) Merr.] leaflets reflectance aiming for the construction of a disease classification model. Leaflet reflectance was evaluated on two cultivars (susceptible and partially resistant) at four disease severity levels: healthy, low, moderate, and high. Leaflets were collected in the field and taken to the laboratory for spectral evaluation through the spectrophotometer UV 2700 coupled with Integrating Sphere Attachment ISR-603, in the range of 270-1000 nm. The feasibility of using a collection of vegetation indices (VIs) and data dimensionality reduction through multiple factor analysis (MFA) was evaluated, and a classification model was constructed. Ten algorithms were assessed based on precision, sensibility, and accuracy parameters, using 80% of the dataset as training data and 20% as testing dataset. The visible range and red edge region contributed more significantly to the disease prediction and classification model. The MFA performed satisfactorily in the dimensionality reduction and unveiled the effect of specific wavelengths on the classification of each class. Most of the VIs studied had high correlation performance across the severity classes. Classification accuracy and precision were >70% for all models. Linear support vector machine with the collection of VIs achieved the best results. This study provides a practical path for developing a detection model to be integrated into SBR management programs.Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)Sao Paulo State Univ, Dept Plant Protect, Sch Agr, Ave Univ, BR-3780 Botucatu, SP, BrazilSao Paulo State Univ, Dep Biotechnol & Bioproc, Sch Agr, Ave Univ, BR-3780 Botucatu, SP, BrazilSao Paulo State Univ, Dept Plant Protect, Sch Agr, Ave Univ, BR-3780 Botucatu, SP, BrazilSao Paulo State Univ, Dep Biotechnol & Bioproc, Sch Agr, Ave Univ, BR-3780 Botucatu, SP, BrazilFAPESP: 2018/26486-0FAPESP: 2018/24869-0CNPq: 142443/2018-2CAPES: 001Wiley-BlackwellUniversidade Estadual Paulista (UNESP)Negrisoli, Matheus Mereb [UNESP]Negrisoli, RaphaelMereb [UNESP]Silva, FlavioNunes da [UNESP]Lopes, Lucasda Silva [UNESP]Souza Junior, Franciscode Sales de [UNESP]Velini, Edivaldo Domingues [UNESP]Carbonari, Caio Antonio [UNESP]Rodrigues, Sergio Augusto [UNESP]Raetano, Carlos Gilberto [UNESP]2022-11-30T13:47:03Z2022-11-30T13:47:03Z2022-09-15info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article17http://dx.doi.org/10.1002/agj2.21152Agronomy Journal. Hoboken: Wiley, 17 p., 2022.0002-1962http://hdl.handle.net/11449/23786410.1002/agj2.21152WOS:000853733100001Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengAgronomy Journalinfo:eu-repo/semantics/openAccess2024-04-30T18:07:44Zoai:repositorio.unesp.br:11449/237864Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T22:39:09.997056Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Soybean rust detection and disease severity classification by remote sensing
title Soybean rust detection and disease severity classification by remote sensing
spellingShingle Soybean rust detection and disease severity classification by remote sensing
Negrisoli, Matheus Mereb [UNESP]
title_short Soybean rust detection and disease severity classification by remote sensing
title_full Soybean rust detection and disease severity classification by remote sensing
title_fullStr Soybean rust detection and disease severity classification by remote sensing
title_full_unstemmed Soybean rust detection and disease severity classification by remote sensing
title_sort Soybean rust detection and disease severity classification by remote sensing
author Negrisoli, Matheus Mereb [UNESP]
author_facet Negrisoli, Matheus Mereb [UNESP]
Negrisoli, RaphaelMereb [UNESP]
Silva, FlavioNunes da [UNESP]
Lopes, Lucasda Silva [UNESP]
Souza Junior, Franciscode Sales de [UNESP]
Velini, Edivaldo Domingues [UNESP]
Carbonari, Caio Antonio [UNESP]
Rodrigues, Sergio Augusto [UNESP]
Raetano, Carlos Gilberto [UNESP]
author_role author
author2 Negrisoli, RaphaelMereb [UNESP]
Silva, FlavioNunes da [UNESP]
Lopes, Lucasda Silva [UNESP]
Souza Junior, Franciscode Sales de [UNESP]
Velini, Edivaldo Domingues [UNESP]
Carbonari, Caio Antonio [UNESP]
Rodrigues, Sergio Augusto [UNESP]
Raetano, Carlos Gilberto [UNESP]
author2_role author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (UNESP)
dc.contributor.author.fl_str_mv Negrisoli, Matheus Mereb [UNESP]
Negrisoli, RaphaelMereb [UNESP]
Silva, FlavioNunes da [UNESP]
Lopes, Lucasda Silva [UNESP]
Souza Junior, Franciscode Sales de [UNESP]
Velini, Edivaldo Domingues [UNESP]
Carbonari, Caio Antonio [UNESP]
Rodrigues, Sergio Augusto [UNESP]
Raetano, Carlos Gilberto [UNESP]
description The detection and monitoring of soybean rust (SBR) through remote sensing is promising because of the importance of the crop and the aspects of the disease. We evaluated the effects of different levels of SBR severity on soybean [Glycine max (L.) Merr.] leaflets reflectance aiming for the construction of a disease classification model. Leaflet reflectance was evaluated on two cultivars (susceptible and partially resistant) at four disease severity levels: healthy, low, moderate, and high. Leaflets were collected in the field and taken to the laboratory for spectral evaluation through the spectrophotometer UV 2700 coupled with Integrating Sphere Attachment ISR-603, in the range of 270-1000 nm. The feasibility of using a collection of vegetation indices (VIs) and data dimensionality reduction through multiple factor analysis (MFA) was evaluated, and a classification model was constructed. Ten algorithms were assessed based on precision, sensibility, and accuracy parameters, using 80% of the dataset as training data and 20% as testing dataset. The visible range and red edge region contributed more significantly to the disease prediction and classification model. The MFA performed satisfactorily in the dimensionality reduction and unveiled the effect of specific wavelengths on the classification of each class. Most of the VIs studied had high correlation performance across the severity classes. Classification accuracy and precision were >70% for all models. Linear support vector machine with the collection of VIs achieved the best results. This study provides a practical path for developing a detection model to be integrated into SBR management programs.
publishDate 2022
dc.date.none.fl_str_mv 2022-11-30T13:47:03Z
2022-11-30T13:47:03Z
2022-09-15
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1002/agj2.21152
Agronomy Journal. Hoboken: Wiley, 17 p., 2022.
0002-1962
http://hdl.handle.net/11449/237864
10.1002/agj2.21152
WOS:000853733100001
url http://dx.doi.org/10.1002/agj2.21152
http://hdl.handle.net/11449/237864
identifier_str_mv Agronomy Journal. Hoboken: Wiley, 17 p., 2022.
0002-1962
10.1002/agj2.21152
WOS:000853733100001
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Agronomy Journal
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 17
dc.publisher.none.fl_str_mv Wiley-Blackwell
publisher.none.fl_str_mv Wiley-Blackwell
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
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