The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
Autor(a) principal: | |
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Data de Publicação: | 2019 |
Outros Autores: | , , , , , , , , , , , , , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1038/s41598-019-41457-x http://hdl.handle.net/11449/187501 |
Resumo: | We have sequenced the genome of the largest freshwater fish species of the world, the arapaima. Analysis of gene family dynamics and signatures of positive selection identified genes involved in the specific adaptations and unique features of this iconic species, in particular it’s large size and fast growth. Genome sequences from both sexes combined with RAD-tag analyses from other males and females led to the isolation of male-specific scaffolds and supports an XY sex determination system in arapaima. Whole transcriptome sequencing showed that the product of the gland-like secretory organ on the head surface of males and females may not only provide nutritional fluid for sex-unbiased parental care, but that the organ itself has a more specific function in males, which engage more in parental care. |
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The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination systemWe have sequenced the genome of the largest freshwater fish species of the world, the arapaima. Analysis of gene family dynamics and signatures of positive selection identified genes involved in the specific adaptations and unique features of this iconic species, in particular it’s large size and fast growth. Genome sequences from both sexes combined with RAD-tag analyses from other males and females led to the isolation of male-specific scaffolds and supports an XY sex determination system in arapaima. Whole transcriptome sequencing showed that the product of the gland-like secretory organ on the head surface of males and females may not only provide nutritional fluid for sex-unbiased parental care, but that the organ itself has a more specific function in males, which engage more in parental care.University of Wuerzburg Physiological Chemistry BiocenterKey Laboratory of Aquatic Biodiversity and Conservation of the Chinese Academy of Sciences Institute of Hydrobiology Chinese Academy of SciencesUniversity of Chinese Academy of SciencesLeibniz-Institute of Freshwater Ecology and Inland Fisheries IGB, Müggelseedamm 301Reproductive and Molecular Biology Group Departament of Morphology Institute of Biosciences UNESPINRA UR1037 LPGP Fish Physiology and GenomicsMIAT INRA Toulouse CS 52627Montpellier GenomiX (MGX) c/o Institut de Génomique Fonctionnelle 141 rue de la cardonilleInstitute of Neuroscience University of Oregon EugeneLehrstuhl für Zoologie und Evolutionsbiologie Department of Biology University of Konstanz Universitätstraße 10Comprehensive Cancer Center Mainfranken University HospitalHagler Institute for Advanced Study and Department of Biology Texas A&M UniversityReproductive and Molecular Biology Group Departament of Morphology Institute of Biosciences UNESPBiocenterChinese Academy of SciencesUniversity of Chinese Academy of SciencesIGBUniversidade Estadual Paulista (Unesp)Fish Physiology and GenomicsCS 52627141 rue de la cardonilleEugeneUniversitätstraße 10University HospitalTexas A&M UniversityDu, KangWuertz, SvenAdolfi, MateusKneitz, SusanneStöck, MatthiasOliveira, Marcos [UNESP]Nóbrega, Rafael [UNESP]Ormanns, JennyKloas, WernerFeron, RomainKlopp, ChristopheParrinello, HuguesJournot, LaurentHe, ShunpingPostlethwait, JohnMeyer, AxelGuiguen, YannSchartl, Manfred2019-10-06T15:38:01Z2019-10-06T15:38:01Z2019-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-019-41457-xScientific Reports, v. 9, n. 1, 2019.2045-2322http://hdl.handle.net/11449/18750110.1038/s41598-019-41457-x2-s2.0-85063603948Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2021-10-23T20:19:17Zoai:repositorio.unesp.br:11449/187501Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:22:22.058313Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
title |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
spellingShingle |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system Du, Kang |
title_short |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
title_full |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
title_fullStr |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
title_full_unstemmed |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
title_sort |
The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system |
author |
Du, Kang |
author_facet |
Du, Kang Wuertz, Sven Adolfi, Mateus Kneitz, Susanne Stöck, Matthias Oliveira, Marcos [UNESP] Nóbrega, Rafael [UNESP] Ormanns, Jenny Kloas, Werner Feron, Romain Klopp, Christophe Parrinello, Hugues Journot, Laurent He, Shunping Postlethwait, John Meyer, Axel Guiguen, Yann Schartl, Manfred |
author_role |
author |
author2 |
Wuertz, Sven Adolfi, Mateus Kneitz, Susanne Stöck, Matthias Oliveira, Marcos [UNESP] Nóbrega, Rafael [UNESP] Ormanns, Jenny Kloas, Werner Feron, Romain Klopp, Christophe Parrinello, Hugues Journot, Laurent He, Shunping Postlethwait, John Meyer, Axel Guiguen, Yann Schartl, Manfred |
author2_role |
author author author author author author author author author author author author author author author author author |
dc.contributor.none.fl_str_mv |
Biocenter Chinese Academy of Sciences University of Chinese Academy of Sciences IGB Universidade Estadual Paulista (Unesp) Fish Physiology and Genomics CS 52627 141 rue de la cardonille Eugene Universitätstraße 10 University Hospital Texas A&M University |
dc.contributor.author.fl_str_mv |
Du, Kang Wuertz, Sven Adolfi, Mateus Kneitz, Susanne Stöck, Matthias Oliveira, Marcos [UNESP] Nóbrega, Rafael [UNESP] Ormanns, Jenny Kloas, Werner Feron, Romain Klopp, Christophe Parrinello, Hugues Journot, Laurent He, Shunping Postlethwait, John Meyer, Axel Guiguen, Yann Schartl, Manfred |
description |
We have sequenced the genome of the largest freshwater fish species of the world, the arapaima. Analysis of gene family dynamics and signatures of positive selection identified genes involved in the specific adaptations and unique features of this iconic species, in particular it’s large size and fast growth. Genome sequences from both sexes combined with RAD-tag analyses from other males and females led to the isolation of male-specific scaffolds and supports an XY sex determination system in arapaima. Whole transcriptome sequencing showed that the product of the gland-like secretory organ on the head surface of males and females may not only provide nutritional fluid for sex-unbiased parental care, but that the organ itself has a more specific function in males, which engage more in parental care. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-06T15:38:01Z 2019-10-06T15:38:01Z 2019-12-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1038/s41598-019-41457-x Scientific Reports, v. 9, n. 1, 2019. 2045-2322 http://hdl.handle.net/11449/187501 10.1038/s41598-019-41457-x 2-s2.0-85063603948 |
url |
http://dx.doi.org/10.1038/s41598-019-41457-x http://hdl.handle.net/11449/187501 |
identifier_str_mv |
Scientific Reports, v. 9, n. 1, 2019. 2045-2322 10.1038/s41598-019-41457-x 2-s2.0-85063603948 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Scientific Reports |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.source.none.fl_str_mv |
Scopus reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
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1808129194483253248 |