The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system

Detalhes bibliográficos
Autor(a) principal: Du, Kang
Data de Publicação: 2019
Outros Autores: Wuertz, Sven, Adolfi, Mateus, Kneitz, Susanne, Stöck, Matthias, Oliveira, Marcos [UNESP], Nóbrega, Rafael [UNESP], Ormanns, Jenny, Kloas, Werner, Feron, Romain, Klopp, Christophe, Parrinello, Hugues, Journot, Laurent, He, Shunping, Postlethwait, John, Meyer, Axel, Guiguen, Yann, Schartl, Manfred
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1038/s41598-019-41457-x
http://hdl.handle.net/11449/187501
Resumo: We have sequenced the genome of the largest freshwater fish species of the world, the arapaima. Analysis of gene family dynamics and signatures of positive selection identified genes involved in the specific adaptations and unique features of this iconic species, in particular it’s large size and fast growth. Genome sequences from both sexes combined with RAD-tag analyses from other males and females led to the isolation of male-specific scaffolds and supports an XY sex determination system in arapaima. Whole transcriptome sequencing showed that the product of the gland-like secretory organ on the head surface of males and females may not only provide nutritional fluid for sex-unbiased parental care, but that the organ itself has a more specific function in males, which engage more in parental care.
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spelling The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination systemWe have sequenced the genome of the largest freshwater fish species of the world, the arapaima. Analysis of gene family dynamics and signatures of positive selection identified genes involved in the specific adaptations and unique features of this iconic species, in particular it’s large size and fast growth. Genome sequences from both sexes combined with RAD-tag analyses from other males and females led to the isolation of male-specific scaffolds and supports an XY sex determination system in arapaima. Whole transcriptome sequencing showed that the product of the gland-like secretory organ on the head surface of males and females may not only provide nutritional fluid for sex-unbiased parental care, but that the organ itself has a more specific function in males, which engage more in parental care.University of Wuerzburg Physiological Chemistry BiocenterKey Laboratory of Aquatic Biodiversity and Conservation of the Chinese Academy of Sciences Institute of Hydrobiology Chinese Academy of SciencesUniversity of Chinese Academy of SciencesLeibniz-Institute of Freshwater Ecology and Inland Fisheries IGB, Müggelseedamm 301Reproductive and Molecular Biology Group Departament of Morphology Institute of Biosciences UNESPINRA UR1037 LPGP Fish Physiology and GenomicsMIAT INRA Toulouse CS 52627Montpellier GenomiX (MGX) c/o Institut de Génomique Fonctionnelle 141 rue de la cardonilleInstitute of Neuroscience University of Oregon EugeneLehrstuhl für Zoologie und Evolutionsbiologie Department of Biology University of Konstanz Universitätstraße 10Comprehensive Cancer Center Mainfranken University HospitalHagler Institute for Advanced Study and Department of Biology Texas A&M UniversityReproductive and Molecular Biology Group Departament of Morphology Institute of Biosciences UNESPBiocenterChinese Academy of SciencesUniversity of Chinese Academy of SciencesIGBUniversidade Estadual Paulista (Unesp)Fish Physiology and GenomicsCS 52627141 rue de la cardonilleEugeneUniversitätstraße 10University HospitalTexas A&M UniversityDu, KangWuertz, SvenAdolfi, MateusKneitz, SusanneStöck, MatthiasOliveira, Marcos [UNESP]Nóbrega, Rafael [UNESP]Ormanns, JennyKloas, WernerFeron, RomainKlopp, ChristopheParrinello, HuguesJournot, LaurentHe, ShunpingPostlethwait, JohnMeyer, AxelGuiguen, YannSchartl, Manfred2019-10-06T15:38:01Z2019-10-06T15:38:01Z2019-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-019-41457-xScientific Reports, v. 9, n. 1, 2019.2045-2322http://hdl.handle.net/11449/18750110.1038/s41598-019-41457-x2-s2.0-85063603948Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2021-10-23T20:19:17Zoai:repositorio.unesp.br:11449/187501Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T20:22:22.058313Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
title The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
spellingShingle The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
Du, Kang
title_short The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
title_full The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
title_fullStr The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
title_full_unstemmed The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
title_sort The genome of the arapaima (Arapaima gigas) provides insights into gigantism, fast growth and chromosomal sex determination system
author Du, Kang
author_facet Du, Kang
Wuertz, Sven
Adolfi, Mateus
Kneitz, Susanne
Stöck, Matthias
Oliveira, Marcos [UNESP]
Nóbrega, Rafael [UNESP]
Ormanns, Jenny
Kloas, Werner
Feron, Romain
Klopp, Christophe
Parrinello, Hugues
Journot, Laurent
He, Shunping
Postlethwait, John
Meyer, Axel
Guiguen, Yann
Schartl, Manfred
author_role author
author2 Wuertz, Sven
Adolfi, Mateus
Kneitz, Susanne
Stöck, Matthias
Oliveira, Marcos [UNESP]
Nóbrega, Rafael [UNESP]
Ormanns, Jenny
Kloas, Werner
Feron, Romain
Klopp, Christophe
Parrinello, Hugues
Journot, Laurent
He, Shunping
Postlethwait, John
Meyer, Axel
Guiguen, Yann
Schartl, Manfred
author2_role author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
author
dc.contributor.none.fl_str_mv Biocenter
Chinese Academy of Sciences
University of Chinese Academy of Sciences
IGB
Universidade Estadual Paulista (Unesp)
Fish Physiology and Genomics
CS 52627
141 rue de la cardonille
Eugene
Universitätstraße 10
University Hospital
Texas A&M University
dc.contributor.author.fl_str_mv Du, Kang
Wuertz, Sven
Adolfi, Mateus
Kneitz, Susanne
Stöck, Matthias
Oliveira, Marcos [UNESP]
Nóbrega, Rafael [UNESP]
Ormanns, Jenny
Kloas, Werner
Feron, Romain
Klopp, Christophe
Parrinello, Hugues
Journot, Laurent
He, Shunping
Postlethwait, John
Meyer, Axel
Guiguen, Yann
Schartl, Manfred
description We have sequenced the genome of the largest freshwater fish species of the world, the arapaima. Analysis of gene family dynamics and signatures of positive selection identified genes involved in the specific adaptations and unique features of this iconic species, in particular it’s large size and fast growth. Genome sequences from both sexes combined with RAD-tag analyses from other males and females led to the isolation of male-specific scaffolds and supports an XY sex determination system in arapaima. Whole transcriptome sequencing showed that the product of the gland-like secretory organ on the head surface of males and females may not only provide nutritional fluid for sex-unbiased parental care, but that the organ itself has a more specific function in males, which engage more in parental care.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-06T15:38:01Z
2019-10-06T15:38:01Z
2019-12-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1038/s41598-019-41457-x
Scientific Reports, v. 9, n. 1, 2019.
2045-2322
http://hdl.handle.net/11449/187501
10.1038/s41598-019-41457-x
2-s2.0-85063603948
url http://dx.doi.org/10.1038/s41598-019-41457-x
http://hdl.handle.net/11449/187501
identifier_str_mv Scientific Reports, v. 9, n. 1, 2019.
2045-2322
10.1038/s41598-019-41457-x
2-s2.0-85063603948
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Scientific Reports
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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