A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers

Detalhes bibliográficos
Autor(a) principal: Ciapina, L. P.
Data de Publicação: 2004
Outros Autores: Alves, LMC, Lemos, EGM
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1111/j.1365-2672.2004.02176.x
http://hdl.handle.net/11449/3927
Resumo: Aims: Detection of Xylella fastidiosa in citrus plants and insect vectors.Methods and Results: Chelex 100 resin matrix was successfully standardized allowing a fast DNA extraction of X. fastidiosa. An amplicon of 500 bp was observed in samples of citrus leaf and citrus xylem extract, with and without symptoms of citrus variegated chlorosis, using PCR with a specific primer set indicating the presence of X. fastidiosa. The addition of insoluble acid-washed polyvinylpyrrolidone (PVPP) prior to DNA extraction of insect samples using Chelex 100 resin together with nested-PCR permitted the detection of X. fastidiosa within sharpshooter heads with great sensitivity. It was possible to detect up to two bacteria per reaction. From 250 sharpshooter samples comprising four species (Dilobopterus costalimai, Oncometopia facialis, Bucephalogonia xanthopis and Acrogonia sp.), 87 individuals showed positive results for X. fastidiosa in a nested-PCR assay.Conclusions: the use of Chelex 100 resin allowed a fast and efficient DNA extraction to be used in the detection of X. fastidiosa in citrus plants and insect vectors by PCR and nested-PCR assays, respectively.Significance and Impact of the study: the employment of efficient and sensitive methods to detect X. fastidiosa in citrus plants and insect vectors will greatly assist epidemiological studies.
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spelling A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppersChelex 100citrus variegated chlorosisDNA extractionNested PCRsharpshooterXylella fastidiosaAims: Detection of Xylella fastidiosa in citrus plants and insect vectors.Methods and Results: Chelex 100 resin matrix was successfully standardized allowing a fast DNA extraction of X. fastidiosa. An amplicon of 500 bp was observed in samples of citrus leaf and citrus xylem extract, with and without symptoms of citrus variegated chlorosis, using PCR with a specific primer set indicating the presence of X. fastidiosa. The addition of insoluble acid-washed polyvinylpyrrolidone (PVPP) prior to DNA extraction of insect samples using Chelex 100 resin together with nested-PCR permitted the detection of X. fastidiosa within sharpshooter heads with great sensitivity. It was possible to detect up to two bacteria per reaction. From 250 sharpshooter samples comprising four species (Dilobopterus costalimai, Oncometopia facialis, Bucephalogonia xanthopis and Acrogonia sp.), 87 individuals showed positive results for X. fastidiosa in a nested-PCR assay.Conclusions: the use of Chelex 100 resin allowed a fast and efficient DNA extraction to be used in the detection of X. fastidiosa in citrus plants and insect vectors by PCR and nested-PCR assays, respectively.Significance and Impact of the study: the employment of efficient and sensitive methods to detect X. fastidiosa in citrus plants and insect vectors will greatly assist epidemiological studies.Univ Estadual Paulista, Fac Ciências Agr & Vet, Dept Technol, Lab Bioquim Microrganismos & Plantas, Jaboticabal, SP, BrazilUniv Estadual Paulista, Fac Ciências Agr & Vet, Dept Technol, Lab Bioquim Microrganismos & Plantas, Jaboticabal, SP, BrazilBlackwell PublishingUniversidade Estadual Paulista (Unesp)Ciapina, L. P.Alves, LMCLemos, EGM2014-05-20T13:17:29Z2014-05-20T13:17:29Z2004-01-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article546-551application/pdfhttp://dx.doi.org/10.1111/j.1365-2672.2004.02176.xJournal of Applied Microbiology. Oxford: Blackwell Publishing Ltd, v. 96, n. 3, p. 546-551, 2004.1364-5072http://hdl.handle.net/11449/392710.1111/j.1365-2672.2004.02176.xWOS:000188990400014WOS000188990400014.pdf6676176632132637Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengJournal of Applied Microbiology2.1600,795info:eu-repo/semantics/openAccess2024-06-07T15:31:35Zoai:repositorio.unesp.br:11449/3927Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T16:13:38.242387Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
title A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
spellingShingle A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
Ciapina, L. P.
Chelex 100
citrus variegated chlorosis
DNA extraction
Nested PCR
sharpshooter
Xylella fastidiosa
title_short A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
title_full A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
title_fullStr A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
title_full_unstemmed A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
title_sort A nested-PCR assay for detection of Xylella fastidiosa in citrus plants and sharpshooter leafhoppers
author Ciapina, L. P.
author_facet Ciapina, L. P.
Alves, LMC
Lemos, EGM
author_role author
author2 Alves, LMC
Lemos, EGM
author2_role author
author
dc.contributor.none.fl_str_mv Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Ciapina, L. P.
Alves, LMC
Lemos, EGM
dc.subject.por.fl_str_mv Chelex 100
citrus variegated chlorosis
DNA extraction
Nested PCR
sharpshooter
Xylella fastidiosa
topic Chelex 100
citrus variegated chlorosis
DNA extraction
Nested PCR
sharpshooter
Xylella fastidiosa
description Aims: Detection of Xylella fastidiosa in citrus plants and insect vectors.Methods and Results: Chelex 100 resin matrix was successfully standardized allowing a fast DNA extraction of X. fastidiosa. An amplicon of 500 bp was observed in samples of citrus leaf and citrus xylem extract, with and without symptoms of citrus variegated chlorosis, using PCR with a specific primer set indicating the presence of X. fastidiosa. The addition of insoluble acid-washed polyvinylpyrrolidone (PVPP) prior to DNA extraction of insect samples using Chelex 100 resin together with nested-PCR permitted the detection of X. fastidiosa within sharpshooter heads with great sensitivity. It was possible to detect up to two bacteria per reaction. From 250 sharpshooter samples comprising four species (Dilobopterus costalimai, Oncometopia facialis, Bucephalogonia xanthopis and Acrogonia sp.), 87 individuals showed positive results for X. fastidiosa in a nested-PCR assay.Conclusions: the use of Chelex 100 resin allowed a fast and efficient DNA extraction to be used in the detection of X. fastidiosa in citrus plants and insect vectors by PCR and nested-PCR assays, respectively.Significance and Impact of the study: the employment of efficient and sensitive methods to detect X. fastidiosa in citrus plants and insect vectors will greatly assist epidemiological studies.
publishDate 2004
dc.date.none.fl_str_mv 2004-01-01
2014-05-20T13:17:29Z
2014-05-20T13:17:29Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1111/j.1365-2672.2004.02176.x
Journal of Applied Microbiology. Oxford: Blackwell Publishing Ltd, v. 96, n. 3, p. 546-551, 2004.
1364-5072
http://hdl.handle.net/11449/3927
10.1111/j.1365-2672.2004.02176.x
WOS:000188990400014
WOS000188990400014.pdf
6676176632132637
url http://dx.doi.org/10.1111/j.1365-2672.2004.02176.x
http://hdl.handle.net/11449/3927
identifier_str_mv Journal of Applied Microbiology. Oxford: Blackwell Publishing Ltd, v. 96, n. 3, p. 546-551, 2004.
1364-5072
10.1111/j.1365-2672.2004.02176.x
WOS:000188990400014
WOS000188990400014.pdf
6676176632132637
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Journal of Applied Microbiology
2.160
0,795
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 546-551
application/pdf
dc.publisher.none.fl_str_mv Blackwell Publishing
publisher.none.fl_str_mv Blackwell Publishing
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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