Development and validation of a simple machine learning tool to predict mortality in leptospirosis

Detalhes bibliográficos
Autor(a) principal: Galdino, Gabriela Studart
Data de Publicação: 2023
Outros Autores: de Sandes-Freitas, Tainá Veras, de Andrade, Luis Gustavo Modelli [UNESP], Adamian, Caio Manuel Caetano, Meneses, Gdayllon Cavalcante, da Silva Junior, Geraldo Bezerra, de Francesco Daher, Elizabeth
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1038/s41598-023-31707-4
http://hdl.handle.net/11449/247031
Resumo: Predicting risk factors for death in leptospirosis is challenging, and identifying high-risk patients is crucial as it might expedite the start of life-saving supportive care. Admission data of 295 leptospirosis patients were enrolled, and a machine-learning approach was used to fit models in a derivation cohort. The comparison of accuracy metrics was performed with two previous models—SPIRO score and quick SOFA score. A Lasso regression analysis was the selected model, demonstrating the best accuracy to predict mortality in leptospirosis [area under the curve (AUC-ROC) = 0.776]. A score-based prediction was carried out with the coefficients of this model and named LeptoScore. Then, to simplify the predictive tool, a new score was built by attributing points to the predictors with importance values higher than 1. The simplified score, named QuickLepto, has five variables (age > 40 years; lethargy; pulmonary symptom; mean arterial pressure < 80 mmHg and hematocrit < 30%) and good predictive accuracy (AUC-ROC = 0.788). LeptoScore and QuickLepto had better accuracy to predict mortality in patients with leptospirosis when compared to SPIRO score (AUC-ROC = 0.500) and quick SOFA score (AUC-ROC = 0.782). The main result is a new scoring system, the QuickLepto, that is a simple and useful tool to predict death in leptospirosis patients at hospital admission.
id UNSP_ecefc87b8c39f8b41d13eb1c74ed8ada
oai_identifier_str oai:repositorio.unesp.br:11449/247031
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Development and validation of a simple machine learning tool to predict mortality in leptospirosisPredicting risk factors for death in leptospirosis is challenging, and identifying high-risk patients is crucial as it might expedite the start of life-saving supportive care. Admission data of 295 leptospirosis patients were enrolled, and a machine-learning approach was used to fit models in a derivation cohort. The comparison of accuracy metrics was performed with two previous models—SPIRO score and quick SOFA score. A Lasso regression analysis was the selected model, demonstrating the best accuracy to predict mortality in leptospirosis [area under the curve (AUC-ROC) = 0.776]. A score-based prediction was carried out with the coefficients of this model and named LeptoScore. Then, to simplify the predictive tool, a new score was built by attributing points to the predictors with importance values higher than 1. The simplified score, named QuickLepto, has five variables (age > 40 years; lethargy; pulmonary symptom; mean arterial pressure < 80 mmHg and hematocrit < 30%) and good predictive accuracy (AUC-ROC = 0.788). LeptoScore and QuickLepto had better accuracy to predict mortality in patients with leptospirosis when compared to SPIRO score (AUC-ROC = 0.500) and quick SOFA score (AUC-ROC = 0.782). The main result is a new scoring system, the QuickLepto, that is a simple and useful tool to predict death in leptospirosis patients at hospital admission.Medical Sciences Postgraduate Program Federal University of Ceará, Rua Silva Jatahy 1000 ap 600, CearáHospital Universitário Walter Cantídio Federal University of Ceará, CearáHospital Geral de Fortaleza, CearaBotucatu Medical School Universidade Estadual Paulista, São PauloSchool of Medicine Medical Sciences and Public Health Postgraduate Programs University of Fortaleza, CearáBotucatu Medical School Universidade Estadual Paulista, São PauloFederal University of CearáHospital Geral de FortalezaUniversidade Estadual Paulista (UNESP)University of FortalezaGaldino, Gabriela Studartde Sandes-Freitas, Tainá Verasde Andrade, Luis Gustavo Modelli [UNESP]Adamian, Caio Manuel CaetanoMeneses, Gdayllon Cavalcanteda Silva Junior, Geraldo Bezerrade Francesco Daher, Elizabeth2023-07-29T12:57:09Z2023-07-29T12:57:09Z2023-12-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/articlehttp://dx.doi.org/10.1038/s41598-023-31707-4Scientific Reports, v. 13, n. 1, 2023.2045-2322http://hdl.handle.net/11449/24703110.1038/s41598-023-31707-42-s2.0-85150665881Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengScientific Reportsinfo:eu-repo/semantics/openAccess2023-07-29T12:57:09Zoai:repositorio.unesp.br:11449/247031Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-07-29T12:57:09Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Development and validation of a simple machine learning tool to predict mortality in leptospirosis
title Development and validation of a simple machine learning tool to predict mortality in leptospirosis
spellingShingle Development and validation of a simple machine learning tool to predict mortality in leptospirosis
Galdino, Gabriela Studart
title_short Development and validation of a simple machine learning tool to predict mortality in leptospirosis
title_full Development and validation of a simple machine learning tool to predict mortality in leptospirosis
title_fullStr Development and validation of a simple machine learning tool to predict mortality in leptospirosis
title_full_unstemmed Development and validation of a simple machine learning tool to predict mortality in leptospirosis
title_sort Development and validation of a simple machine learning tool to predict mortality in leptospirosis
author Galdino, Gabriela Studart
author_facet Galdino, Gabriela Studart
de Sandes-Freitas, Tainá Veras
de Andrade, Luis Gustavo Modelli [UNESP]
Adamian, Caio Manuel Caetano
Meneses, Gdayllon Cavalcante
da Silva Junior, Geraldo Bezerra
de Francesco Daher, Elizabeth
author_role author
author2 de Sandes-Freitas, Tainá Veras
de Andrade, Luis Gustavo Modelli [UNESP]
Adamian, Caio Manuel Caetano
Meneses, Gdayllon Cavalcante
da Silva Junior, Geraldo Bezerra
de Francesco Daher, Elizabeth
author2_role author
author
author
author
author
author
dc.contributor.none.fl_str_mv Federal University of Ceará
Hospital Geral de Fortaleza
Universidade Estadual Paulista (UNESP)
University of Fortaleza
dc.contributor.author.fl_str_mv Galdino, Gabriela Studart
de Sandes-Freitas, Tainá Veras
de Andrade, Luis Gustavo Modelli [UNESP]
Adamian, Caio Manuel Caetano
Meneses, Gdayllon Cavalcante
da Silva Junior, Geraldo Bezerra
de Francesco Daher, Elizabeth
description Predicting risk factors for death in leptospirosis is challenging, and identifying high-risk patients is crucial as it might expedite the start of life-saving supportive care. Admission data of 295 leptospirosis patients were enrolled, and a machine-learning approach was used to fit models in a derivation cohort. The comparison of accuracy metrics was performed with two previous models—SPIRO score and quick SOFA score. A Lasso regression analysis was the selected model, demonstrating the best accuracy to predict mortality in leptospirosis [area under the curve (AUC-ROC) = 0.776]. A score-based prediction was carried out with the coefficients of this model and named LeptoScore. Then, to simplify the predictive tool, a new score was built by attributing points to the predictors with importance values higher than 1. The simplified score, named QuickLepto, has five variables (age > 40 years; lethargy; pulmonary symptom; mean arterial pressure < 80 mmHg and hematocrit < 30%) and good predictive accuracy (AUC-ROC = 0.788). LeptoScore and QuickLepto had better accuracy to predict mortality in patients with leptospirosis when compared to SPIRO score (AUC-ROC = 0.500) and quick SOFA score (AUC-ROC = 0.782). The main result is a new scoring system, the QuickLepto, that is a simple and useful tool to predict death in leptospirosis patients at hospital admission.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-29T12:57:09Z
2023-07-29T12:57:09Z
2023-12-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1038/s41598-023-31707-4
Scientific Reports, v. 13, n. 1, 2023.
2045-2322
http://hdl.handle.net/11449/247031
10.1038/s41598-023-31707-4
2-s2.0-85150665881
url http://dx.doi.org/10.1038/s41598-023-31707-4
http://hdl.handle.net/11449/247031
identifier_str_mv Scientific Reports, v. 13, n. 1, 2023.
2045-2322
10.1038/s41598-023-31707-4
2-s2.0-85150665881
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Scientific Reports
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1799964859252604928