Automated diagnosis of human intestinal parasites using optical microscopy images

Detalhes bibliográficos
Autor(a) principal: Suzuki, Celso T. N.
Data de Publicação: 2013
Outros Autores: Gomes, Jancarlo F., Falcao, Alexandre X., Shimizu, Sumie H., Papa, João Paulo [UNESP]
Tipo de documento: Artigo de conferência
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1109/ISBI.2013.6556511
http://hdl.handle.net/11449/76314
Resumo: Intestinal parasitosis constitutes a serious health problem in most tropical countries. The diagnosis of enteroparasites in laboratory routine relies on the examination of stool samples using optical microscopy and the error rates usually range from moderate to high. Approaches based on automatic image analysis have been proposed, but the methods are usually specific for some species, some of them are computationally expensive, and image acquisition and focus are manual. We present a solution to automate the diagnosis of the 15 most common species of enteroparasites in Brazil, using a sensitive parasitological technique, a motorized microscope with digital camera for automatic image acquisition and focus, and fast image analysis methods. The results indicate that our solution is effective and suitable for laboratory routine, in which the exam must be concluded in a few minutes. © 2013 IEEE.
id UNSP_ed5c596fb8d2003faa2b86b505010d04
oai_identifier_str oai:repositorio.unesp.br:11449/76314
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling Automated diagnosis of human intestinal parasites using optical microscopy imagesAutomated diagnosisimage segmentationintestinal parasitosismicroscopy image analysispattern recognitionAutomatic image analysisCommon speciesImage analysis methodIntestinal parasitesMicroscopy image analysisTropical countriesImage acquisitionImage analysisImage segmentationMedical imagingOptical microscopyPattern recognitionOptical data storageIntestinal parasitosis constitutes a serious health problem in most tropical countries. The diagnosis of enteroparasites in laboratory routine relies on the examination of stool samples using optical microscopy and the error rates usually range from moderate to high. Approaches based on automatic image analysis have been proposed, but the methods are usually specific for some species, some of them are computationally expensive, and image acquisition and focus are manual. We present a solution to automate the diagnosis of the 15 most common species of enteroparasites in Brazil, using a sensitive parasitological technique, a motorized microscope with digital camera for automatic image acquisition and focus, and fast image analysis methods. The results indicate that our solution is effective and suitable for laboratory routine, in which the exam must be concluded in a few minutes. © 2013 IEEE.IMMUNOCAMP Pesquisa e Desenvolvimento de Tecnologia, Campinas, SPInstitute of Computing University of Campinas, SPFaculty of Pharmaceutical Science University of São PauloComputer Science Department São Paulo State UniversityComputer Science Department São Paulo State UniversityIMMUNOCAMP Pesquisa e Desenvolvimento de TecnologiaUniversidade Estadual de Campinas (UNICAMP)Universidade de São Paulo (USP)Universidade Estadual Paulista (Unesp)Suzuki, Celso T. N.Gomes, Jancarlo F.Falcao, Alexandre X.Shimizu, Sumie H.Papa, João Paulo [UNESP]2014-05-27T11:30:13Z2014-05-27T11:30:13Z2013-08-22info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/conferenceObject460-463http://dx.doi.org/10.1109/ISBI.2013.6556511Proceedings - International Symposium on Biomedical Imaging, p. 460-463.1945-79281945-8452http://hdl.handle.net/11449/7631410.1109/ISBI.2013.65565112-s2.0-848816279209039182932747194Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengProceedings - International Symposium on Biomedical Imaging0,426info:eu-repo/semantics/openAccess2024-04-23T16:11:12Zoai:repositorio.unesp.br:11449/76314Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:48:12.879154Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Automated diagnosis of human intestinal parasites using optical microscopy images
title Automated diagnosis of human intestinal parasites using optical microscopy images
spellingShingle Automated diagnosis of human intestinal parasites using optical microscopy images
Suzuki, Celso T. N.
Automated diagnosis
image segmentation
intestinal parasitosis
microscopy image analysis
pattern recognition
Automatic image analysis
Common species
Image analysis method
Intestinal parasites
Microscopy image analysis
Tropical countries
Image acquisition
Image analysis
Image segmentation
Medical imaging
Optical microscopy
Pattern recognition
Optical data storage
title_short Automated diagnosis of human intestinal parasites using optical microscopy images
title_full Automated diagnosis of human intestinal parasites using optical microscopy images
title_fullStr Automated diagnosis of human intestinal parasites using optical microscopy images
title_full_unstemmed Automated diagnosis of human intestinal parasites using optical microscopy images
title_sort Automated diagnosis of human intestinal parasites using optical microscopy images
author Suzuki, Celso T. N.
author_facet Suzuki, Celso T. N.
Gomes, Jancarlo F.
Falcao, Alexandre X.
Shimizu, Sumie H.
Papa, João Paulo [UNESP]
author_role author
author2 Gomes, Jancarlo F.
Falcao, Alexandre X.
Shimizu, Sumie H.
Papa, João Paulo [UNESP]
author2_role author
author
author
author
dc.contributor.none.fl_str_mv IMMUNOCAMP Pesquisa e Desenvolvimento de Tecnologia
Universidade Estadual de Campinas (UNICAMP)
Universidade de São Paulo (USP)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Suzuki, Celso T. N.
Gomes, Jancarlo F.
Falcao, Alexandre X.
Shimizu, Sumie H.
Papa, João Paulo [UNESP]
dc.subject.por.fl_str_mv Automated diagnosis
image segmentation
intestinal parasitosis
microscopy image analysis
pattern recognition
Automatic image analysis
Common species
Image analysis method
Intestinal parasites
Microscopy image analysis
Tropical countries
Image acquisition
Image analysis
Image segmentation
Medical imaging
Optical microscopy
Pattern recognition
Optical data storage
topic Automated diagnosis
image segmentation
intestinal parasitosis
microscopy image analysis
pattern recognition
Automatic image analysis
Common species
Image analysis method
Intestinal parasites
Microscopy image analysis
Tropical countries
Image acquisition
Image analysis
Image segmentation
Medical imaging
Optical microscopy
Pattern recognition
Optical data storage
description Intestinal parasitosis constitutes a serious health problem in most tropical countries. The diagnosis of enteroparasites in laboratory routine relies on the examination of stool samples using optical microscopy and the error rates usually range from moderate to high. Approaches based on automatic image analysis have been proposed, but the methods are usually specific for some species, some of them are computationally expensive, and image acquisition and focus are manual. We present a solution to automate the diagnosis of the 15 most common species of enteroparasites in Brazil, using a sensitive parasitological technique, a motorized microscope with digital camera for automatic image acquisition and focus, and fast image analysis methods. The results indicate that our solution is effective and suitable for laboratory routine, in which the exam must be concluded in a few minutes. © 2013 IEEE.
publishDate 2013
dc.date.none.fl_str_mv 2013-08-22
2014-05-27T11:30:13Z
2014-05-27T11:30:13Z
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/conferenceObject
format conferenceObject
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1109/ISBI.2013.6556511
Proceedings - International Symposium on Biomedical Imaging, p. 460-463.
1945-7928
1945-8452
http://hdl.handle.net/11449/76314
10.1109/ISBI.2013.6556511
2-s2.0-84881627920
9039182932747194
url http://dx.doi.org/10.1109/ISBI.2013.6556511
http://hdl.handle.net/11449/76314
identifier_str_mv Proceedings - International Symposium on Biomedical Imaging, p. 460-463.
1945-7928
1945-8452
10.1109/ISBI.2013.6556511
2-s2.0-84881627920
9039182932747194
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Proceedings - International Symposium on Biomedical Imaging
0,426
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 460-463
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1808128420448567296