DNA rare copy number alterations in Reinke's Edema

Detalhes bibliográficos
Autor(a) principal: Móz, Luis Eduardo Silva
Data de Publicação: 2023
Outros Autores: Martins, Regina Helena Garcia [UNESP], Lapa, Rainer Marco Lopez, Villacis, Rolando André Rios, dos Reis, Patricia Pintor [UNESP], Rogatto, Silvia Regina
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.bjorl.2022.09.002
http://hdl.handle.net/11449/247741
Resumo: Introduction: Reinke's Edema (RE) is a laryngeal lesion related to excessive tobacco smoking, voice overuse, and laryngopharyngeal reflux. Although the risk of malignancy has been considered low in literature, RE is classified among precancerous lesions. Objectives: We investigated DNA Copy Number Alterations (CNAs) in specimens of RE and its potential association with malignant progression. Methods: We used array-based comparative genomic hybridization (aCGH, Agilent 4 × 180 K platform) to study eight RE cases. All patients were heavy tobacco users for at least 30 years, and none of them progressed to cancer in the follow-up (>8 years). Two RE presented mild dysplasia, one moderate dysplasia, and no histological alterations were found in the remaining five cases. CNAs were compared with the Database of Genomic Variants (DGV) and genes mapped on altered regions had their functions annotated. Results: Six of eight patients showed different rare copy number alterations on chromosomes 2q37.3, 4q13.1, 4q13.3, 7q11.22, 10p14, and 13q34. A gain of the whole chromosome 8 were detected in one case. Of interest, four of eight RE cases showed copy number imbalances involving genes previously described in several tumor types (RASA3, COL6A3, LINC00707, LINP1, SMR3A, and SMR3B). Conclusion: The genomic imbalances herein found in RE have the potential to contribute to the phenotype but with limited or no risk of cancer. A long-term follow-up in a large series of patients could clarify the mechanisms involved in the malignant progression of RE. Level of evidence: 4.
id UNSP_f464848c36f2f8e414bfd399585f3d3b
oai_identifier_str oai:repositorio.unesp.br:11449/247741
network_acronym_str UNSP
network_name_str Repositório Institucional da UNESP
repository_id_str 2946
spelling DNA rare copy number alterations in Reinke's EdemaDNA copy number variationsGenomic medicineLaryngeal edemaMicroarray analysisPreneoplastic conditionIntroduction: Reinke's Edema (RE) is a laryngeal lesion related to excessive tobacco smoking, voice overuse, and laryngopharyngeal reflux. Although the risk of malignancy has been considered low in literature, RE is classified among precancerous lesions. Objectives: We investigated DNA Copy Number Alterations (CNAs) in specimens of RE and its potential association with malignant progression. Methods: We used array-based comparative genomic hybridization (aCGH, Agilent 4 × 180 K platform) to study eight RE cases. All patients were heavy tobacco users for at least 30 years, and none of them progressed to cancer in the follow-up (>8 years). Two RE presented mild dysplasia, one moderate dysplasia, and no histological alterations were found in the remaining five cases. CNAs were compared with the Database of Genomic Variants (DGV) and genes mapped on altered regions had their functions annotated. Results: Six of eight patients showed different rare copy number alterations on chromosomes 2q37.3, 4q13.1, 4q13.3, 7q11.22, 10p14, and 13q34. A gain of the whole chromosome 8 were detected in one case. Of interest, four of eight RE cases showed copy number imbalances involving genes previously described in several tumor types (RASA3, COL6A3, LINC00707, LINP1, SMR3A, and SMR3B). Conclusion: The genomic imbalances herein found in RE have the potential to contribute to the phenotype but with limited or no risk of cancer. A long-term follow-up in a large series of patients could clarify the mechanisms involved in the malignant progression of RE. Level of evidence: 4.Faculdade de Ciências Médicas da Santa Casa de São Paulo, SPSão Camilo OncologiaUniversidade Estadual Paulista (UNESP) Faculdade de Medicina Departamento de Especialidades Cirúrgicas e Anestesiologia, SPNational University Toribio Rodríguez de Mendoza of Amazonas Institute of Livestock and Biotechnology Laboratory of Molecular PhysiologyUniversidade de Brasília (UnB) Instituto de Ciências Biológicas Departamento de Genética e Morfologia, DFUniversidade Estadual Paulista (UNESP) Faculdade de Medicina Departamento de Cirurgia e Ortopedia, SPUniversity Hospital of Southern Denmark Department of Clinical GeneticsUniversity of Southern Denmark Institute of Regional Health ResearchUniversidade Estadual Paulista (UNESP) Faculdade de Medicina Departamento de Especialidades Cirúrgicas e Anestesiologia, SPUniversidade Estadual Paulista (UNESP) Faculdade de Medicina Departamento de Cirurgia e Ortopedia, SPFaculdade de Ciências Médicas da Santa Casa de São PauloSão Camilo OncologiaUniversidade Estadual Paulista (UNESP)Laboratory of Molecular PhysiologyUniversidade de Brasília (UnB)University Hospital of Southern DenmarkInstitute of Regional Health ResearchMóz, Luis Eduardo SilvaMartins, Regina Helena Garcia [UNESP]Lapa, Rainer Marco LopezVillacis, Rolando André Riosdos Reis, Patricia Pintor [UNESP]Rogatto, Silvia Regina2023-07-29T13:24:33Z2023-07-29T13:24:33Z2023-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article279-284http://dx.doi.org/10.1016/j.bjorl.2022.09.002Brazilian Journal of Otorhinolaryngology, v. 89, n. 2, p. 279-284, 2023.1808-86861808-8694http://hdl.handle.net/11449/24774110.1016/j.bjorl.2022.09.0022-s2.0-85139849162Scopusreponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengBrazilian Journal of Otorhinolaryngologyinfo:eu-repo/semantics/openAccess2023-07-29T13:24:33Zoai:repositorio.unesp.br:11449/247741Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462023-07-29T13:24:33Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv DNA rare copy number alterations in Reinke's Edema
title DNA rare copy number alterations in Reinke's Edema
spellingShingle DNA rare copy number alterations in Reinke's Edema
Móz, Luis Eduardo Silva
DNA copy number variations
Genomic medicine
Laryngeal edema
Microarray analysis
Preneoplastic condition
title_short DNA rare copy number alterations in Reinke's Edema
title_full DNA rare copy number alterations in Reinke's Edema
title_fullStr DNA rare copy number alterations in Reinke's Edema
title_full_unstemmed DNA rare copy number alterations in Reinke's Edema
title_sort DNA rare copy number alterations in Reinke's Edema
author Móz, Luis Eduardo Silva
author_facet Móz, Luis Eduardo Silva
Martins, Regina Helena Garcia [UNESP]
Lapa, Rainer Marco Lopez
Villacis, Rolando André Rios
dos Reis, Patricia Pintor [UNESP]
Rogatto, Silvia Regina
author_role author
author2 Martins, Regina Helena Garcia [UNESP]
Lapa, Rainer Marco Lopez
Villacis, Rolando André Rios
dos Reis, Patricia Pintor [UNESP]
Rogatto, Silvia Regina
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Faculdade de Ciências Médicas da Santa Casa de São Paulo
São Camilo Oncologia
Universidade Estadual Paulista (UNESP)
Laboratory of Molecular Physiology
Universidade de Brasília (UnB)
University Hospital of Southern Denmark
Institute of Regional Health Research
dc.contributor.author.fl_str_mv Móz, Luis Eduardo Silva
Martins, Regina Helena Garcia [UNESP]
Lapa, Rainer Marco Lopez
Villacis, Rolando André Rios
dos Reis, Patricia Pintor [UNESP]
Rogatto, Silvia Regina
dc.subject.por.fl_str_mv DNA copy number variations
Genomic medicine
Laryngeal edema
Microarray analysis
Preneoplastic condition
topic DNA copy number variations
Genomic medicine
Laryngeal edema
Microarray analysis
Preneoplastic condition
description Introduction: Reinke's Edema (RE) is a laryngeal lesion related to excessive tobacco smoking, voice overuse, and laryngopharyngeal reflux. Although the risk of malignancy has been considered low in literature, RE is classified among precancerous lesions. Objectives: We investigated DNA Copy Number Alterations (CNAs) in specimens of RE and its potential association with malignant progression. Methods: We used array-based comparative genomic hybridization (aCGH, Agilent 4 × 180 K platform) to study eight RE cases. All patients were heavy tobacco users for at least 30 years, and none of them progressed to cancer in the follow-up (>8 years). Two RE presented mild dysplasia, one moderate dysplasia, and no histological alterations were found in the remaining five cases. CNAs were compared with the Database of Genomic Variants (DGV) and genes mapped on altered regions had their functions annotated. Results: Six of eight patients showed different rare copy number alterations on chromosomes 2q37.3, 4q13.1, 4q13.3, 7q11.22, 10p14, and 13q34. A gain of the whole chromosome 8 were detected in one case. Of interest, four of eight RE cases showed copy number imbalances involving genes previously described in several tumor types (RASA3, COL6A3, LINC00707, LINP1, SMR3A, and SMR3B). Conclusion: The genomic imbalances herein found in RE have the potential to contribute to the phenotype but with limited or no risk of cancer. A long-term follow-up in a large series of patients could clarify the mechanisms involved in the malignant progression of RE. Level of evidence: 4.
publishDate 2023
dc.date.none.fl_str_mv 2023-07-29T13:24:33Z
2023-07-29T13:24:33Z
2023-03-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.bjorl.2022.09.002
Brazilian Journal of Otorhinolaryngology, v. 89, n. 2, p. 279-284, 2023.
1808-8686
1808-8694
http://hdl.handle.net/11449/247741
10.1016/j.bjorl.2022.09.002
2-s2.0-85139849162
url http://dx.doi.org/10.1016/j.bjorl.2022.09.002
http://hdl.handle.net/11449/247741
identifier_str_mv Brazilian Journal of Otorhinolaryngology, v. 89, n. 2, p. 279-284, 2023.
1808-8686
1808-8694
10.1016/j.bjorl.2022.09.002
2-s2.0-85139849162
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Brazilian Journal of Otorhinolaryngology
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 279-284
dc.source.none.fl_str_mv Scopus
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
_version_ 1799964953255346176