Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
Autor(a) principal: | |
---|---|
Data de Publicação: | 2019 |
Outros Autores: | , , , , |
Tipo de documento: | Artigo |
Idioma: | eng |
Título da fonte: | Repositório Institucional da UNESP |
Texto Completo: | http://dx.doi.org/10.1016/j.ympev.2018.11.003 http://hdl.handle.net/11449/185348 |
Resumo: | Here we reconstructed the demographical history and the dispersal dynamics of Physalemus cuvieri through the Neogene-Quaternary periods by coupling DNA regions with different mutation rates, ecological niche modelling, reconstruction of spatio-temporal lineage dispersal and coalescent simulations. Still, to test alternative diversification scenarios we used approximate Bayesian computation. Molecular phylogenetic analysis recovered four deep and strongly supported clades, which we interpret as population lineages. The ancestral location reconstruction placed the root in southcentral Amazonia, and the dispersal events indicate that spatial displacement was widespread early in the diversification of this species. The demographical scenario of Multiple Refugia with recent lineage admixture was the most likely hypothesis to predict the observed genetic parameters of P. cuvieri. Our results revealed that Neogene orogenic events might have played a prominent role in the early diversification of P. cuvieri. The species shows deep divergences with strong regional population structure, despite its widespread distribution. Final uplift of the central Brazilian Plateau and formation of the river basins in Central South America played an important role in the origin, diversification and the maintenance of P. cuvieri lineages. |
id |
UNSP_f468a1104c763642159c5c0e2b5f9935 |
---|---|
oai_identifier_str |
oai:repositorio.unesp.br:11449/185348 |
network_acronym_str |
UNSP |
network_name_str |
Repositório Institucional da UNESP |
repository_id_str |
2946 |
spelling |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamicsAnuraDispersal dynamicsEcological niche modellingGenetic diversityLeptodactylidaePhylogeographyHere we reconstructed the demographical history and the dispersal dynamics of Physalemus cuvieri through the Neogene-Quaternary periods by coupling DNA regions with different mutation rates, ecological niche modelling, reconstruction of spatio-temporal lineage dispersal and coalescent simulations. Still, to test alternative diversification scenarios we used approximate Bayesian computation. Molecular phylogenetic analysis recovered four deep and strongly supported clades, which we interpret as population lineages. The ancestral location reconstruction placed the root in southcentral Amazonia, and the dispersal events indicate that spatial displacement was widespread early in the diversification of this species. The demographical scenario of Multiple Refugia with recent lineage admixture was the most likely hypothesis to predict the observed genetic parameters of P. cuvieri. Our results revealed that Neogene orogenic events might have played a prominent role in the early diversification of P. cuvieri. The species shows deep divergences with strong regional population structure, despite its widespread distribution. Final uplift of the central Brazilian Plateau and formation of the river basins in Central South America played an important role in the origin, diversification and the maintenance of P. cuvieri lineages.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)FAPDF (Fundacao de Apoio a Pesquisa do Distrito Federal)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Fed Goias, Inst Ciencias Biol, Lab Genet & Biodiversidade, Campus Samambaia, BR-74001970 Goiania, Go, BrazilUniv Fed Goias, Inst Ciencias Biol, Dept Ecol, Lab Herpetol & Comportamento Anim, Campus Samambaia, BR-74001970 Goiania, Go, BrazilUFG, Lab Macroecol, Campus Jatai, BR-75801615 Jatai, Go, BrazilUniv Brasilia, Inst Ciencias Biol, Dept Zool, BR-70910900 Brasilia, DF, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Zool, BR-13506900 Sao Paulo, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Zool, BR-13506900 Sao Paulo, BrazilCNPq: 472397/2013-6Elsevier B.V.Universidade Federal de Goiás (UFG)Universidade de Brasília (UnB)Universidade Estadual Paulista (Unesp)Oliveira Miranda, Nubia Esther deMaciel, Natan MedeirosLima-Ribeiro, Matheus SouzaColli, Guarino RinaldiBaptista Haddade, Celio Fernando [UNESP]Collevatti, Rosane Garcia2019-10-04T12:34:45Z2019-10-04T12:34:45Z2019-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article67-80http://dx.doi.org/10.1016/j.ympev.2018.11.003Molecular Phylogenetics And Evolution. San Diego: Academic Press Inc Elsevier Science, v. 132, p. 67-80, 2019.1055-7903http://hdl.handle.net/11449/18534810.1016/j.ympev.2018.11.003WOS:000456566000007Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMolecular Phylogenetics And Evolutioninfo:eu-repo/semantics/openAccess2021-10-23T12:24:27Zoai:repositorio.unesp.br:11449/185348Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:36:12.555507Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false |
dc.title.none.fl_str_mv |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics |
title |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics |
spellingShingle |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics Oliveira Miranda, Nubia Esther de Anura Dispersal dynamics Ecological niche modelling Genetic diversity Leptodactylidae Phylogeography |
title_short |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics |
title_full |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics |
title_fullStr |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics |
title_full_unstemmed |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics |
title_sort |
Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics |
author |
Oliveira Miranda, Nubia Esther de |
author_facet |
Oliveira Miranda, Nubia Esther de Maciel, Natan Medeiros Lima-Ribeiro, Matheus Souza Colli, Guarino Rinaldi Baptista Haddade, Celio Fernando [UNESP] Collevatti, Rosane Garcia |
author_role |
author |
author2 |
Maciel, Natan Medeiros Lima-Ribeiro, Matheus Souza Colli, Guarino Rinaldi Baptista Haddade, Celio Fernando [UNESP] Collevatti, Rosane Garcia |
author2_role |
author author author author author |
dc.contributor.none.fl_str_mv |
Universidade Federal de Goiás (UFG) Universidade de Brasília (UnB) Universidade Estadual Paulista (Unesp) |
dc.contributor.author.fl_str_mv |
Oliveira Miranda, Nubia Esther de Maciel, Natan Medeiros Lima-Ribeiro, Matheus Souza Colli, Guarino Rinaldi Baptista Haddade, Celio Fernando [UNESP] Collevatti, Rosane Garcia |
dc.subject.por.fl_str_mv |
Anura Dispersal dynamics Ecological niche modelling Genetic diversity Leptodactylidae Phylogeography |
topic |
Anura Dispersal dynamics Ecological niche modelling Genetic diversity Leptodactylidae Phylogeography |
description |
Here we reconstructed the demographical history and the dispersal dynamics of Physalemus cuvieri through the Neogene-Quaternary periods by coupling DNA regions with different mutation rates, ecological niche modelling, reconstruction of spatio-temporal lineage dispersal and coalescent simulations. Still, to test alternative diversification scenarios we used approximate Bayesian computation. Molecular phylogenetic analysis recovered four deep and strongly supported clades, which we interpret as population lineages. The ancestral location reconstruction placed the root in southcentral Amazonia, and the dispersal events indicate that spatial displacement was widespread early in the diversification of this species. The demographical scenario of Multiple Refugia with recent lineage admixture was the most likely hypothesis to predict the observed genetic parameters of P. cuvieri. Our results revealed that Neogene orogenic events might have played a prominent role in the early diversification of P. cuvieri. The species shows deep divergences with strong regional population structure, despite its widespread distribution. Final uplift of the central Brazilian Plateau and formation of the river basins in Central South America played an important role in the origin, diversification and the maintenance of P. cuvieri lineages. |
publishDate |
2019 |
dc.date.none.fl_str_mv |
2019-10-04T12:34:45Z 2019-10-04T12:34:45Z 2019-03-01 |
dc.type.status.fl_str_mv |
info:eu-repo/semantics/publishedVersion |
dc.type.driver.fl_str_mv |
info:eu-repo/semantics/article |
format |
article |
status_str |
publishedVersion |
dc.identifier.uri.fl_str_mv |
http://dx.doi.org/10.1016/j.ympev.2018.11.003 Molecular Phylogenetics And Evolution. San Diego: Academic Press Inc Elsevier Science, v. 132, p. 67-80, 2019. 1055-7903 http://hdl.handle.net/11449/185348 10.1016/j.ympev.2018.11.003 WOS:000456566000007 |
url |
http://dx.doi.org/10.1016/j.ympev.2018.11.003 http://hdl.handle.net/11449/185348 |
identifier_str_mv |
Molecular Phylogenetics And Evolution. San Diego: Academic Press Inc Elsevier Science, v. 132, p. 67-80, 2019. 1055-7903 10.1016/j.ympev.2018.11.003 WOS:000456566000007 |
dc.language.iso.fl_str_mv |
eng |
language |
eng |
dc.relation.none.fl_str_mv |
Molecular Phylogenetics And Evolution |
dc.rights.driver.fl_str_mv |
info:eu-repo/semantics/openAccess |
eu_rights_str_mv |
openAccess |
dc.format.none.fl_str_mv |
67-80 |
dc.publisher.none.fl_str_mv |
Elsevier B.V. |
publisher.none.fl_str_mv |
Elsevier B.V. |
dc.source.none.fl_str_mv |
Web of Science reponame:Repositório Institucional da UNESP instname:Universidade Estadual Paulista (UNESP) instacron:UNESP |
instname_str |
Universidade Estadual Paulista (UNESP) |
instacron_str |
UNESP |
institution |
UNESP |
reponame_str |
Repositório Institucional da UNESP |
collection |
Repositório Institucional da UNESP |
repository.name.fl_str_mv |
Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP) |
repository.mail.fl_str_mv |
|
_version_ |
1808128385679884288 |