Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics

Detalhes bibliográficos
Autor(a) principal: Oliveira Miranda, Nubia Esther de
Data de Publicação: 2019
Outros Autores: Maciel, Natan Medeiros, Lima-Ribeiro, Matheus Souza, Colli, Guarino Rinaldi, Baptista Haddade, Celio Fernando [UNESP], Collevatti, Rosane Garcia
Tipo de documento: Artigo
Idioma: eng
Título da fonte: Repositório Institucional da UNESP
Texto Completo: http://dx.doi.org/10.1016/j.ympev.2018.11.003
http://hdl.handle.net/11449/185348
Resumo: Here we reconstructed the demographical history and the dispersal dynamics of Physalemus cuvieri through the Neogene-Quaternary periods by coupling DNA regions with different mutation rates, ecological niche modelling, reconstruction of spatio-temporal lineage dispersal and coalescent simulations. Still, to test alternative diversification scenarios we used approximate Bayesian computation. Molecular phylogenetic analysis recovered four deep and strongly supported clades, which we interpret as population lineages. The ancestral location reconstruction placed the root in southcentral Amazonia, and the dispersal events indicate that spatial displacement was widespread early in the diversification of this species. The demographical scenario of Multiple Refugia with recent lineage admixture was the most likely hypothesis to predict the observed genetic parameters of P. cuvieri. Our results revealed that Neogene orogenic events might have played a prominent role in the early diversification of P. cuvieri. The species shows deep divergences with strong regional population structure, despite its widespread distribution. Final uplift of the central Brazilian Plateau and formation of the river basins in Central South America played an important role in the origin, diversification and the maintenance of P. cuvieri lineages.
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spelling Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamicsAnuraDispersal dynamicsEcological niche modellingGenetic diversityLeptodactylidaePhylogeographyHere we reconstructed the demographical history and the dispersal dynamics of Physalemus cuvieri through the Neogene-Quaternary periods by coupling DNA regions with different mutation rates, ecological niche modelling, reconstruction of spatio-temporal lineage dispersal and coalescent simulations. Still, to test alternative diversification scenarios we used approximate Bayesian computation. Molecular phylogenetic analysis recovered four deep and strongly supported clades, which we interpret as population lineages. The ancestral location reconstruction placed the root in southcentral Amazonia, and the dispersal events indicate that spatial displacement was widespread early in the diversification of this species. The demographical scenario of Multiple Refugia with recent lineage admixture was the most likely hypothesis to predict the observed genetic parameters of P. cuvieri. Our results revealed that Neogene orogenic events might have played a prominent role in the early diversification of P. cuvieri. The species shows deep divergences with strong regional population structure, despite its widespread distribution. Final uplift of the central Brazilian Plateau and formation of the river basins in Central South America played an important role in the origin, diversification and the maintenance of P. cuvieri lineages.Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)FAPDF (Fundacao de Apoio a Pesquisa do Distrito Federal)Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)Univ Fed Goias, Inst Ciencias Biol, Lab Genet & Biodiversidade, Campus Samambaia, BR-74001970 Goiania, Go, BrazilUniv Fed Goias, Inst Ciencias Biol, Dept Ecol, Lab Herpetol & Comportamento Anim, Campus Samambaia, BR-74001970 Goiania, Go, BrazilUFG, Lab Macroecol, Campus Jatai, BR-75801615 Jatai, Go, BrazilUniv Brasilia, Inst Ciencias Biol, Dept Zool, BR-70910900 Brasilia, DF, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Zool, BR-13506900 Sao Paulo, BrazilUniv Estadual Paulista, Inst Biociencias, Dept Zool, BR-13506900 Sao Paulo, BrazilCNPq: 472397/2013-6Elsevier B.V.Universidade Federal de Goiás (UFG)Universidade de Brasília (UnB)Universidade Estadual Paulista (Unesp)Oliveira Miranda, Nubia Esther deMaciel, Natan MedeirosLima-Ribeiro, Matheus SouzaColli, Guarino RinaldiBaptista Haddade, Celio Fernando [UNESP]Collevatti, Rosane Garcia2019-10-04T12:34:45Z2019-10-04T12:34:45Z2019-03-01info:eu-repo/semantics/publishedVersioninfo:eu-repo/semantics/article67-80http://dx.doi.org/10.1016/j.ympev.2018.11.003Molecular Phylogenetics And Evolution. San Diego: Academic Press Inc Elsevier Science, v. 132, p. 67-80, 2019.1055-7903http://hdl.handle.net/11449/18534810.1016/j.ympev.2018.11.003WOS:000456566000007Web of Sciencereponame:Repositório Institucional da UNESPinstname:Universidade Estadual Paulista (UNESP)instacron:UNESPengMolecular Phylogenetics And Evolutioninfo:eu-repo/semantics/openAccess2021-10-23T12:24:27Zoai:repositorio.unesp.br:11449/185348Repositório InstitucionalPUBhttp://repositorio.unesp.br/oai/requestopendoar:29462024-08-05T14:36:12.555507Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)false
dc.title.none.fl_str_mv Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
title Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
spellingShingle Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
Oliveira Miranda, Nubia Esther de
Anura
Dispersal dynamics
Ecological niche modelling
Genetic diversity
Leptodactylidae
Phylogeography
title_short Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
title_full Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
title_fullStr Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
title_full_unstemmed Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
title_sort Diversification of the widespread neotropical frog Physalaemus cuvieri in response to Neogene-Quaternary geological events and climate dynamics
author Oliveira Miranda, Nubia Esther de
author_facet Oliveira Miranda, Nubia Esther de
Maciel, Natan Medeiros
Lima-Ribeiro, Matheus Souza
Colli, Guarino Rinaldi
Baptista Haddade, Celio Fernando [UNESP]
Collevatti, Rosane Garcia
author_role author
author2 Maciel, Natan Medeiros
Lima-Ribeiro, Matheus Souza
Colli, Guarino Rinaldi
Baptista Haddade, Celio Fernando [UNESP]
Collevatti, Rosane Garcia
author2_role author
author
author
author
author
dc.contributor.none.fl_str_mv Universidade Federal de Goiás (UFG)
Universidade de Brasília (UnB)
Universidade Estadual Paulista (Unesp)
dc.contributor.author.fl_str_mv Oliveira Miranda, Nubia Esther de
Maciel, Natan Medeiros
Lima-Ribeiro, Matheus Souza
Colli, Guarino Rinaldi
Baptista Haddade, Celio Fernando [UNESP]
Collevatti, Rosane Garcia
dc.subject.por.fl_str_mv Anura
Dispersal dynamics
Ecological niche modelling
Genetic diversity
Leptodactylidae
Phylogeography
topic Anura
Dispersal dynamics
Ecological niche modelling
Genetic diversity
Leptodactylidae
Phylogeography
description Here we reconstructed the demographical history and the dispersal dynamics of Physalemus cuvieri through the Neogene-Quaternary periods by coupling DNA regions with different mutation rates, ecological niche modelling, reconstruction of spatio-temporal lineage dispersal and coalescent simulations. Still, to test alternative diversification scenarios we used approximate Bayesian computation. Molecular phylogenetic analysis recovered four deep and strongly supported clades, which we interpret as population lineages. The ancestral location reconstruction placed the root in southcentral Amazonia, and the dispersal events indicate that spatial displacement was widespread early in the diversification of this species. The demographical scenario of Multiple Refugia with recent lineage admixture was the most likely hypothesis to predict the observed genetic parameters of P. cuvieri. Our results revealed that Neogene orogenic events might have played a prominent role in the early diversification of P. cuvieri. The species shows deep divergences with strong regional population structure, despite its widespread distribution. Final uplift of the central Brazilian Plateau and formation of the river basins in Central South America played an important role in the origin, diversification and the maintenance of P. cuvieri lineages.
publishDate 2019
dc.date.none.fl_str_mv 2019-10-04T12:34:45Z
2019-10-04T12:34:45Z
2019-03-01
dc.type.status.fl_str_mv info:eu-repo/semantics/publishedVersion
dc.type.driver.fl_str_mv info:eu-repo/semantics/article
format article
status_str publishedVersion
dc.identifier.uri.fl_str_mv http://dx.doi.org/10.1016/j.ympev.2018.11.003
Molecular Phylogenetics And Evolution. San Diego: Academic Press Inc Elsevier Science, v. 132, p. 67-80, 2019.
1055-7903
http://hdl.handle.net/11449/185348
10.1016/j.ympev.2018.11.003
WOS:000456566000007
url http://dx.doi.org/10.1016/j.ympev.2018.11.003
http://hdl.handle.net/11449/185348
identifier_str_mv Molecular Phylogenetics And Evolution. San Diego: Academic Press Inc Elsevier Science, v. 132, p. 67-80, 2019.
1055-7903
10.1016/j.ympev.2018.11.003
WOS:000456566000007
dc.language.iso.fl_str_mv eng
language eng
dc.relation.none.fl_str_mv Molecular Phylogenetics And Evolution
dc.rights.driver.fl_str_mv info:eu-repo/semantics/openAccess
eu_rights_str_mv openAccess
dc.format.none.fl_str_mv 67-80
dc.publisher.none.fl_str_mv Elsevier B.V.
publisher.none.fl_str_mv Elsevier B.V.
dc.source.none.fl_str_mv Web of Science
reponame:Repositório Institucional da UNESP
instname:Universidade Estadual Paulista (UNESP)
instacron:UNESP
instname_str Universidade Estadual Paulista (UNESP)
instacron_str UNESP
institution UNESP
reponame_str Repositório Institucional da UNESP
collection Repositório Institucional da UNESP
repository.name.fl_str_mv Repositório Institucional da UNESP - Universidade Estadual Paulista (UNESP)
repository.mail.fl_str_mv
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